MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 105846 bp
Accession: NZ_CP030786 Location: 1..105846 Organism: Escherichia albertii strain 2012EL-1823B Replicon: plasmid unnamed3
Accession: NZ_CP030786 Location: 1..105846 Organism: Escherichia albertii strain 2012EL-1823B Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYN53_RS25285 () | 8541..9167 | - | 627 | Protein_1 | IS481 family transposase ISErsp1 | Transposase |
| AYN53_RS26055 () | 9096..9242 | + | 147 | WP_164508687.1 | hypothetical protein | - |
| AYN53_RS25295 () | 9517..9597 | - | 81 | WP_072244078.1 | cytochrome bd-I oxidase subunit CydX | - |
| AYN53_RS25300 () | 9613..10752 | - | 1140 | WP_059257128.1 | cytochrome d ubiquinol oxidase subunit II | - |
| AYN53_RS25305 () | 10771..12321 | - | 1551 | WP_059257127.1 | cytochrome ubiquinol oxidase subunit I | - |
| AYN53_RS25310 () | 12407..13003 | - | 597 | WP_059245489.1 | DoxX family protein | - |
| AYN53_RS25315 () | 13021..13734 | - | 714 | WP_072244077.1 | putative DNA-binding domain-containing protein | - |
| AYN53_RS25320 () | 13709..14560 | - | 852 | WP_059278856.1 | DUF692 domain-containing protein | - |
| AYN53_RS25325 () | 14548..14865 | - | 318 | WP_059236668.1 | hypothetical protein | - |
| AYN53_RS25330 () | 14869..15819 | - | 951 | WP_113650876.1 | MBL fold metallo-hydrolase | - |
| AYN53_RS25335 () | 16648..17187 | - | 540 | WP_125295819.1 | hypothetical protein | - |
| AYN53_RS25340 () | 17683..17913 | + | 231 | WP_059278859.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| AYN53_RS25345 () | 17910..18326 | + | 417 | WP_053884725.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| AYN53_RS25350 () | 18482..19291 | + | 810 | WP_113650879.1 | class I SAM-dependent methyltransferase | - |
| AYN53_RS25360 () | 19967..20184 | + | 218 | Protein_15 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| AYN53_RS25365 () | 20181..20517 | + | 337 | Protein_16 | VapC toxin family PIN domain ribonuclease | - |
| AYN53_RS25370 () | 20567..22519 | - | 1953 | WP_113650881.1 | Limonene hydroxylase | VF |
| AYN53_RS25375 () | 22675..23637 | - | 963 | WP_059278862.1 | 2-keto-3-deoxygluconate permease | - |
| AYN53_RS25380 () | 23744..24907 | - | 1164 | WP_059278863.1 | UxaA family hydrolase | - |
| AYN53_RS25385 () | 24943..25233 | - | 291 | WP_059278864.1 | UxaA family hydrolase | - |
| AYN53_RS25390 () | 25454..25621 | - | 168 | WP_077871065.1 | transposase | - |
| AYN53_RS25395 () | 25916..26213 | - | 298 | Protein_22 | IS3 family transposase | - |
| AYN53_RS25400 () | 26265..26566 | + | 302 | Protein_23 | IS3 family transposase ISSen1 | Transposase |
| AYN53_RS25405 () | 27068..27889 | + | 822 | WP_059257258.1 | polysaccharide deacetylase family protein | - |
| AYN53_RS25410 () | 27892..28995 | + | 1104 | WP_113650882.1 | glycosyltransferase family 4 protein | - |
| AYN53_RS25415 () | 29153..30091 | + | 939 | WP_113650883.1 | Lipid A biosynthesis myristoyltransferase | VF |
| AYN53_RS25420 () | 30723..31667 | + | 945 | WP_113650884.1 | VirK/YbjX family protein | - |
| AYN53_RS25425 () | 32195..32602 | - | 408 | WP_113650885.1 | hypothetical protein | - |
| AYN53_RS25430 () | 33025..33807 | - | 783 | WP_164508688.1 | Taurine import ATP-binding protein TauB | VF |
| AYN53_RS25435 () | 33830..35548 | - | 1719 | WP_113650887.1 | ABC transporter permease subunit | - |
| AYN53_RS25440 () | 35676..35894 | - | 219 | WP_125295820.1 | hypothetical protein | - |
| AYN53_RS25445 () | 36473..37364 | - | 892 | Protein_32 | transposase | - |
| AYN53_RS25450 () | 37514..38071 | + | 558 | WP_113650888.1 | hypothetical protein | - |
| AYN53_RS25455 () | 38380..38760 | + | 381 | WP_113650889.1 | hypothetical protein | - |
| AYN53_RS25465 () | 39980..40126 | - | 147 | Protein_36 | type 1 fimbrial protein | - |
| AYN53_RS25470 () | 40137..40705 | - | 569 | Protein_37 | hypothetical protein | VF |
| AYN53_RS25475 () | 40741..41472 | - | 732 | WP_113650890.1 | Chaperone protein PapD | VF |
| AYN53_RS25480 () | 41602..44109 | - | 2508 | WP_113650891.1 | Outer membrane usher protein PapC | VF |
| AYN53_RS25485 () | 44264..44851 | - | 588 | WP_113650892.1 | PAP fimbrial minor pilin protein | VF |
| AYN53_RS25490 () | 44932..45453 | - | 522 | WP_113650912.1 | Pap fimbrial major pilin protein | VF |
| AYN53_RS25495 () | 45919..46206 | - | 288 | WP_113650893.1 | Major pilu subunit operon regulatory protein PapB | VF |
| AYN53_RS25500 () | 47093..51223 | - | 4131 | WP_113650895.1 | Hemoglobin-binding protease hbp autotransporter | VF |
| AYN53_RS25505 () | 51561..52094 | + | 534 | Protein_44 | transposase | - |
| AYN53_RS26060 () | 52042..52215 | + | 174 | WP_164474005.1 | hypothetical protein | - |
| AYN53_RS25515 () | 53098..53613 | - | 516 | Protein_46 | amidohydrolase family protein | - |
| AYN53_RS25520 () | 53680..54462 | - | 783 | Protein_47 | IS21 family transposase IS100 | Transposase |
| AYN53_RS25525 () | 54459..55481 | - | 1023 | WP_113650896.1 | IS21 family transposase IS100kyp | Transposase |
| AYN53_RS25530 () | 55540..56547 | - | 1008 | Protein_49 | amidohydrolase | - |
| AYN53_RS25535 () | 56601..57086 | + | 486 | WP_113650897.1 | heme-binding protein | - |
| AYN53_RS25540 () | 57690..58580 | - | 891 | Protein_51 | DDE-type integrase/transposase/recombinase | - |
| AYN53_RS25545 () | 58871..59443 | + | 573 | WP_059278948.1 | hypothetical protein | - |
| AYN53_RS25550 () | 60062..61282 | + | 1221 | WP_059278949.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| AYN53_RS25555 () | 61282..63405 | + | 2124 | WP_113650898.1 | peptidase domain-containing ABC transporter | - |
| AYN53_RS25560 () | 64030..64608 | + | 579 | WP_059236323.1 | hypothetical protein | VF |
| AYN53_RS25565 () | 64725..65413 | - | 689 | Protein_56 | transposase | - |
| AYN53_RS25570 () | 65605..65886 | - | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| AYN53_RS25575 () | 65867..66196 | - | 330 | WP_113650899.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| AYN53_RS25580 () | 67132..67989 | - | 858 | WP_124783371.1 | incFII family plasmid replication initiator RepA | - |
| AYN53_RS25585 () | 67982..68056 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| AYN53_RS25595 () | 68287..68544 | - | 258 | WP_059278829.1 | replication regulatory protein RepA | - |
| AYN53_RS25600 () | 68856..69338 | - | 483 | WP_113650901.1 | GNAT family N-acetyltransferase | Toxin Detail |
| AYN53_RS25605 () | 69329..69631 | - | 303 | WP_072146426.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| AYN53_RS25610 () | 69951..70100 | - | 150 | WP_072249360.1 | type I toxin-antitoxin system Hok family toxin | - |
| AYN53_RS25620 () | 70164..71198 | + | 1035 | Protein_65 | IS481 family transposase ISKpn28 | Transposase |
| AYN53_RS25625 () | 71208..71764 | - | 557 | Protein_66 | DDE-type integrase/transposase/recombinase | - |
| AYN53_RS25630 () | 71771..71973 | - | 203 | Protein_67 | IS110 family transposase ISEc21 | Transposase |
| AYN53_RS25635 () | 72064..72189 | + | 126 | WP_074458686.1 | IS110 family transposase ISEc21 | Transposase |
| AYN53_RS25640 () | 72310..73050 | + | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| AYN53_RS25645 () | 73335..74312 | - | 978 | WP_059276356.1 | RepB family plasmid replication initiator protein | - |
| AYN53_RS25660 () | 75393..76559 | + | 1167 | WP_059278927.1 | plasmid-partitioning protein SopA | - |
| AYN53_RS25665 () | 76559..77530 | + | 972 | WP_059278926.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| AYN53_RS25670 () | 78044..78295 | + | 252 | WP_001132891.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| AYN53_RS25675 () | 78292..78579 | + | 288 | WP_000222759.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AYN53_RS26180 () | 78715..79612 | + | 898 | Protein_75 | transposase | - |
| AYN53_RS25690 () | 79915..80628 | - | 714 | WP_059278925.1 | molecular chaperone | - |
| AYN53_RS25695 () | 80625..81953 | - | 1329 | WP_113650902.1 | fimbrial protein | - |
| AYN53_RS25700 () | 81950..84541 | - | 2592 | WP_125295821.1 | putative outer membrane usher protein ElfC | VF |
| AYN53_RS25705 () | 84498..85220 | - | 723 | WP_059278848.1 | putative fimbrial chaperone YadV | VF |
| AYN53_RS25710 () | 85274..85822 | - | 549 | WP_059278847.1 | S-fimbrial protein subunit SfaA | VF |
| AYN53_RS25715 () | 87068..87280 | - | 213 | WP_113650904.1 | RNA chaperone/antiterminator CspA | - |
| AYN53_RS25720 () | 87586..87751 | - | 166 | Protein_82 | ISKra4 family transposase | - |
| AYN53_RS25725 () | 87859..88154 | + | 296 | Protein_83 | IS200/IS605 family transposase | - |
| AYN53_RS25730 () | 88284..89486 | - | 1203 | WP_059278846.1 | FAD-dependent oxidoreductase | - |
| AYN53_RS25735 () | 89617..90126 | + | 510 | WP_059278845.1 | Rrf2 family transcriptional regulator | - |
| AYN53_RS25740 () | 90700..90753 | - | 54 | Protein_86 | DUF4113 domain-containing protein | - |
| AYN53_RS26185 () | 90753..90967 | - | 215 | Protein_87 | peptidase | - |
| AYN53_RS25750 () | 90948..91294 | + | 347 | Protein_88 | hypothetical protein | - |
| AYN53_RS25755 () | 91284..91661 | + | 378 | WP_113650848.1 | conjugation system SOS inhibitor PsiB | - |
| AYN53_RS25760 () | 91715..92435 | + | 721 | Protein_90 | plasmid SOS inhibition protein A | - |
| AYN53_RS25765 () | 92435..92944 | + | 510 | WP_113650905.1 | hypothetical protein | - |
| - () | 92969..93169 | + | 201 | NuclAT_0 | - | - |
| - () | 92969..93169 | + | 201 | NuclAT_0 | - | - |
| - () | 92969..93169 | + | 201 | NuclAT_0 | - | - |
| - () | 92969..93169 | + | 201 | NuclAT_0 | - | - |
| AYN53_RS25775 () | 93178..94251 | - | 1074 | WP_099588292.1 | IS481 family transposase ISKpn28 | Transposase |
| AYN53_RS25785 () | 94303..94558 | - | 256 | Protein_93 | IS3 family transposase ISEc48 | Transposase |
| AYN53_RS25790 () | 95189..95506 | - | 318 | WP_113650906.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| AYN53_RS25795 () | 95938..96930 | - | 993 | WP_125295822.1 | nuclease PIN | - |
| AYN53_RS25800 () | 96952..97464 | - | 513 | WP_113650907.1 | Minor fimbrial protein PrsF | VF |
| AYN53_RS25805 () | 97539..98102 | - | 564 | WP_113650908.1 | hypothetical protein | VF |
| AYN53_RS25810 () | 98139..98870 | - | 732 | WP_024223294.1 | Chaperone protein PapD | VF |
| AYN53_RS25815 () | 98939..101446 | - | 2508 | WP_113650909.1 | Outer membrane usher protein PapC | VF |
| AYN53_RS25820 () | 101601..102173 | - | 573 | WP_113650910.1 | PAP fimbrial minor pilin protein | VF |
| AYN53_RS25825 () | 102254..102778 | - | 525 | WP_024223297.1 | Pap fimbrial major pilin protein | VF |
| AYN53_RS25830 () | 103288..103697 | - | 410 | Protein_102 | IS3 family transposase | - |
| AYN53_RS25835 () | 103718..103986 | + | 269 | Protein_103 | DDE-type integrase/transposase/recombinase | - |
| AYN53_RS25840 () | 104145..104482 | + | 338 | Protein_104 | IS110 family transposase ISLxx2 | Transposase |
| AYN53_RS25845 () | 104921..105670 | - | 750 | Protein_105 | transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|