MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 56603 bp
Accession: NZ_CP030779 Location: 1..56603 Organism: Escherichia albertii strain 05-3106 Replicon: plasmid unnamed1
Accession: NZ_CP030779 Location: 1..56603 Organism: Escherichia albertii strain 05-3106 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CYM74_RS23220 () | 1945..4155 | + | 2211 | Protein_1 | hypothetical protein | - |
| CYM74_RS23230 () | 4564..5314 | - | 751 | Protein_2 | replication initiation protein RepE | - |
| CYM74_RS23235 () | 5872..6679 | - | 808 | Protein_3 | phage integrase family protein | - |
| CYM74_RS23240 () | 6680..6985 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| CYM74_RS23245 () | 6987..7205 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| CYM74_RS23255 () | 7800..8069 | + | 270 | WP_000343793.1 | hypothetical protein | - |
| CYM74_RS23260 () | 8057..8653 | + | 597 | WP_001277208.1 | hypothetical protein | - |
| CYM74_RS23270 () | 9431..10408 | + | 978 | WP_001414517.1 | RepB family plasmid replication initiator protein | - |
| CYM74_RS23275 () | 10687..11427 | - | 741 | WP_001066945.1 | tyrosine-type recombinase/integrase | - |
| CYM74_RS23280 () | 11548..11682 | - | 135 | WP_113623324.1 | transcriptional regulator | - |
| CYM74_RS23285 () | 12086..12367 | + | 282 | Protein_11 | IS481 family transposase ISErsp1 | Transposase |
| CYM74_RS23295 () | 12786..13898 | - | 1113 | WP_024179954.1 | IS4 family transposase IS421 | Transposase |
| CYM74_RS23300 () | 13949..14089 | - | 141 | Protein_13 | IS91 family transposase | - |
| CYM74_RS23305 () | 14215..14625 | + | 411 | Protein_14 | Tn3 family transposase | - |
| CYM74_RS23310 () | 14923..15513 | - | 591 | WP_072163275.1 | Major structural subunit of bundle-forming pilus | VF |
| CYM74_RS24335 () | 16018..16257 | - | 240 | WP_000877929.1 | Major structural subunit of bundle-forming pilus | VF |
| CYM74_RS23325 () | 16686..17117 | - | 432 | WP_052583076.1 | hypothetical protein | VF |
| CYM74_RS23330 () | 17096..17857 | - | 762 | WP_000569540.1 | Leader peptidase PppA | VF |
| CYM74_RS23335 () | 17860..18816 | - | 957 | WP_000377351.1 | Twitching mobility protein | VF |
| CYM74_RS23340 () | 18828..19886 | - | 1059 | WP_024166436.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| CYM74_RS23345 () | 19911..21506 | - | 1596 | WP_113623316.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| CYM74_RS23350 () | 21510..21968 | - | 459 | WP_052938032.1 | hypothetical protein | VF |
| CYM74_RS23355 () | 21973..23199 | - | 1227 | WP_113623317.1 | hypothetical protein | VF |
| CYM74_RS23360 () | 23196..24833 | - | 1638 | WP_113623318.1 | Outer membrane lipoprotein BfpB | VF |
| CYM74_RS23365 () | 24839..25129 | - | 291 | WP_088551788.1 | hypothetical protein | VF |
| CYM74_RS23370 () | 25292..25897 | - | 606 | WP_044715079.1 | Major structural subunit of bundle-forming pilus | VF |
| CYM74_RS23375 () | 26385..26843 | - | 459 | WP_044708377.1 | hypothetical protein | - |
| CYM74_RS24270 () | 26848..27270 | - | 423 | WP_001041494.1 | hypothetical protein | - |
| CYM74_RS23385 () | 27267..27857 | - | 591 | WP_044708378.1 | hypothetical protein | - |
| CYM74_RS23390 () | 27799..28308 | - | 510 | WP_164511699.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| CYM74_RS23395 () | 28397..28576 | - | 180 | WP_164511700.1 | ANR family transcriptional regulator | - |
| CYM74_RS23400 () | 28900..29688 | + | 789 | WP_113623320.1 | CFA/I fimbrial subunit D | VF |
| CYM74_RS23405 () | 30042..31102 | - | 1061 | Protein_33 | IS3 family transposase IS2 | Transposase |
| CYM74_RS23410 () | 31678..32541 | + | 864 | WP_000606641.1 | Transposon Tn10 TetD protein | VF |
| CYM74_RS23415 () | 33146..33523 | - | 378 | WP_125296023.1 | hypothetical protein | - |
| CYM74_RS24275 () | 33583..33732 | - | 150 | WP_002460893.1 | hypothetical protein | VF |
| CYM74_RS24340 () | 33854..33970 | + | 117 | Protein_37 | ISL3 family transposase ISEc53 | Transposase |
| CYM74_RS23430 () | 34603..35085 | - | 483 | WP_001311056.1 | hypothetical protein | - |
| CYM74_RS23435 () | 35202..36013 | - | 812 | Protein_39 | 3'-5' exoribonuclease | - |
| CYM74_RS23440 () | 36059..36340 | - | 282 | WP_044718080.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CYM74_RS23445 () | 36337..36606 | - | 270 | WP_000079928.1 | hypothetical protein | Antitoxin Detail |
| CYM74_RS23455 () | 37522..38379 | - | 858 | WP_000130987.1 | incFII family plasmid replication initiator RepA | - |
| CYM74_RS23460 () | 38372..38446 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| CYM74_RS23470 () | 38684..38944 | - | 261 | WP_000078108.1 | replication regulatory protein RepA | - |
| CYM74_RS23475 () | 39228..39434 | - | 207 | WP_000876345.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 39426..39482 | + | 57 | NuclAT_0 | - | Antitoxin Detail |
| - () | 39426..39482 | + | 57 | NuclAT_0 | - | Antitoxin Detail |
| - () | 39426..39482 | + | 57 | NuclAT_0 | - | Antitoxin Detail |
| - () | 39426..39482 | + | 57 | NuclAT_0 | - | Antitoxin Detail |
| CYM74_RS23480 () | 39723..39932 | - | 210 | WP_024234785.1 | hemolysin expression modulator Hha | - |
| CYM74_RS23485 () | 39988..40224 | - | 237 | WP_000376558.1 | hypothetical protein | - |
| CYM74_RS23490 () | 40311..41324 | - | 1014 | WP_000118342.1 | hypothetical protein | - |
| CYM74_RS23495 () | 41431..41697 | - | 267 | WP_113623322.1 | hypothetical protein | - |
| CYM74_RS23500 () | 41736..42518 | - | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| CYM74_RS23505 () | 42515..43537 | - | 1023 | WP_000255946.1 | IS21 family transposase IS100kyp | Transposase |
| CYM74_RS23510 () | 43604..43777 | - | 174 | WP_206430860.1 | hypothetical protein | - |
| CYM74_RS23520 () | 44171..44419 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| CYM74_RS23525 () | 44416..44853 | + | 438 | Protein_54 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CYM74_RS23530 () | 44853..46127 | + | 1275 | WP_000457532.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| CYM74_RS23535 () | 46129..46545 | - | 417 | WP_001278816.1 | plasmid partitioning/stability family protein | - |
| CYM74_RS23540 () | 46538..47518 | - | 981 | WP_113623323.1 | plasmid segregation protein ParM | - |
| CYM74_RS23545 () | 47943..48266 | - | 324 | WP_000047594.1 | hypothetical protein | - |
| CYM74_RS23550 () | 48353..48997 | - | 645 | WP_001144035.1 | ParA family protein | - |
| CYM74_RS24345 () | 49176..49298 | - | 123 | Protein_60 | phage integrase family protein | - |
| CYM74_RS23555 () | 49392..50560 | + | 1169 | Protein_61 | IS3 family transposase IS911 | Transposase |
| CYM74_RS23560 () | 50656..52150 | + | 1495 | Protein_62 | dynamin family protein | - |
| CYM74_RS23565 () | 52126..52347 | + | 222 | WP_001435387.1 | hypothetical protein | - |
| CYM74_RS23570 () | 52369..54543 | + | 2175 | WP_001072867.1 | dynamin family protein | - |
| CYM74_RS23575 () | 54545..55762 | + | 1218 | WP_001346274.1 | dynamin family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|