MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 148530 bp
Accession: NZ_CP030176 Location: 1..148530 Organism: Salmonella enterica subsp. enterica serovar Milwaukee str. SA19950795 Replicon: plasmid pIncFII.1
Accession: NZ_CP030176 Location: 1..148530 Organism: Salmonella enterica subsp. enterica serovar Milwaukee str. SA19950795 Replicon: plasmid pIncFII.1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LFZ28_RS24735 () | 1629..2165 | + | 537 | Protein_1 | hypothetical protein | - |
| LFZ28_RS24740 () | 3161..4030 | + | 870 | WP_058108427.1 | YjiK family protein | - |
| LFZ28_RS24750 () | 5571..5876 | + | 306 | WP_044127393.1 | adhesin biosynthesis transcription regulatory family protein | - |
| LFZ28_RS24755 () | 5913..6449 | + | 537 | WP_058108428.1 | fimbrial protein | - |
| LFZ28_RS24760 () | 6458..8908 | + | 2451 | WP_058108429.1 | F4 (K88) fimbrial usher FaeD | - |
| LFZ28_RS24765 () | 8931..9719 | + | 789 | WP_058108495.1 | fimbria/pilus periplasmic chaperone | - |
| LFZ28_RS24770 () | 9747..10241 | + | 495 | WP_044128321.1 | DUF5462 family protein | - |
| LFZ28_RS24775 () | 10475..11263 | + | 789 | WP_058108430.1 | hypothetical protein | - |
| LFZ28_RS24780 () | 11499..12296 | + | 798 | WP_058108431.1 | F4 (K88) fimbria minor subunit FaeH | - |
| LFZ28_RS24785 () | 12324..13088 | + | 765 | WP_058108432.1 | fimbrial protein | - |
| LFZ28_RS24790 () | 13075..13296 | + | 222 | Protein_11 | hypothetical protein | - |
| LFZ28_RS24795 () | 13379..14098 | + | 720 | WP_058108433.1 | F4 (K88) fimbria accessory protein FaeJ | - |
| LFZ28_RS24800 () | 14210..14782 | + | 573 | Protein_13 | hypothetical protein | - |
| LFZ28_RS24805 () | 14922..15785 | + | 864 | WP_058108435.1 | hypothetical protein | - |
| LFZ28_RS24810 () | 15827..19762 | + | 3936 | WP_058108436.1 | temperature sensitive hemagglutinin | - |
| LFZ28_RS24815 () | 19752..19985 | + | 234 | WP_044127709.1 | hypothetical protein | - |
| LFZ28_RS24820 () | 20248..21957 | + | 1710 | WP_058108437.1 | type III secretion system outer membrane ring subunit SctC | - |
| LFZ28_RS24825 () | 21947..23077 | + | 1131 | WP_077917404.1 | type III secretion system gatekeeper subunit SctW | - |
| LFZ28_RS24830 () | 23071..25137 | + | 2067 | WP_058108856.1 | EscV/YscV/HrcV family type III secretion system export apparatus protein | - |
| LFZ28_RS24835 () | 25174..26466 | + | 1293 | WP_044126678.1 | type III secretion system ATPase SctN | - |
| LFZ28_RS24840 () | 26450..26917 | + | 468 | WP_044126676.1 | hypothetical protein | - |
| LFZ28_RS24845 () | 26886..27713 | + | 828 | WP_058108439.1 | hypothetical protein | - |
| LFZ28_RS24850 () | 27713..28612 | + | 900 | WP_058108440.1 | YscQ/HrcQ family type III secretion apparatus protein | - |
| LFZ28_RS24855 () | 28602..29267 | + | 666 | WP_044128154.1 | EscR/YscR/HrcR family type III secretion system export apparatus protein | - |
| LFZ28_RS24860 () | 29298..29558 | + | 261 | WP_031570176.1 | EscS/YscS/HrcS family type III secretion system export apparatus protein | - |
| LFZ28_RS24865 () | 29563..30336 | + | 774 | WP_044128152.1 | SpaR/YscT/HrcT type III secretion system export apparatus protein | - |
| LFZ28_RS24870 () | 30343..31431 | + | 1089 | WP_058108441.1 | EscU/YscU/HrcU family type III secretion system export apparatus switch protein | - |
| LFZ28_RS24875 () | 31482..31982 | + | 501 | WP_044128150.1 | type III secretion system translocator chaperone SicA | - |
| LFZ28_RS24880 () | 31975..33702 | + | 1728 | WP_058108442.1 | type III secretion system translocon subunit SctE | - |
| LFZ28_RS24885 () | 33732..34715 | + | 984 | WP_072010165.1 | type III secretion system translocon subunit SctB | - |
| LFZ28_RS24890 () | 34774..35757 | + | 984 | WP_058108443.1 | type III secretion system needle tip protein SctA | - |
| LFZ28_RS24895 () | 35838..37019 | + | 1182 | WP_058108444.1 | PrgH/EprH family type III secretion apparatus protein | - |
| LFZ28_RS24900 () | 37038..37286 | + | 249 | WP_031570197.1 | type III secretion system needle complex protein | - |
| LFZ28_RS24905 () | 37305..37604 | + | 300 | WP_049828546.1 | type III secretion system inner rod subunit SctI | - |
| LFZ28_RS24910 () | 37601..38353 | + | 753 | WP_058108445.1 | EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein | - |
| LFZ28_RS24915 () | 38346..38942 | + | 597 | WP_065336643.1 | hypothetical protein | - |
| LFZ28_RS24920 () | 38881..39579 | + | 699 | WP_058108446.1 | hypothetical protein | - |
| LFZ28_RS24925 () | 39670..40584 | + | 915 | WP_058108447.1 | hypothetical protein | - |
| LFZ28_RS24930 () | 40781..42430 | + | 1650 | WP_058108448.1 | hypothetical protein | - |
| LFZ28_RS24935 () | 42488..42874 | + | 387 | WP_058108449.1 | chaperone SicP | - |
| LFZ28_RS24940 () | 43007..43612 | + | 606 | WP_058108450.1 | hypothetical protein | - |
| LFZ28_RS24945 () | 43800..44144 | - | 345 | WP_058108451.1 | hypothetical protein | - |
| LFZ28_RS24950 () | 44901..45818 | + | 918 | WP_058108452.1 | hypothetical protein | - |
| LFZ28_RS24955 () | 45941..46792 | + | 852 | WP_162802314.1 | hypothetical protein | - |
| LFZ28_RS24960 () | 46817..47962 | + | 1146 | WP_058108454.1 | hypothetical protein | - |
| LFZ28_RS24965 () | 47972..48451 | + | 480 | WP_058108455.1 | type III secretion system chaperone | - |
| LFZ28_RS24970 () | 48439..48852 | + | 414 | WP_058108456.1 | type III secretion system chaperone | - |
| LFZ28_RS24975 () | 49001..49255 | - | 255 | WP_058108457.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| LFZ28_RS24980 () | 49252..49503 | - | 252 | WP_058108458.1 | YoeB-YefM toxin-antitoxin system antitoxin YefM | Antitoxin Detail |
| LFZ28_RS24985 () | 49763..50113 | - | 351 | WP_058108459.1 | hypothetical protein | - |
| LFZ28_RS24995 () | 52098..52538 | + | 441 | WP_058108461.1 | universal stress protein | - |
| LFZ28_RS26440 () | 53466..54059 | + | 594 | WP_162802315.1 | hypothetical protein | - |
| LFZ28_RS25010 () | 54499..55401 | - | 903 | WP_077950179.1 | hypothetical protein | - |
| LFZ28_RS25015 () | 55533..55853 | - | 321 | WP_058108464.1 | hypothetical protein | - |
| LFZ28_RS25020 () | 56183..57178 | - | 996 | WP_058108465.1 | hypothetical protein | - |
| LFZ28_RS26445 () | 58104..58400 | + | 297 | WP_073998961.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LFZ28_RS25035 () | 58454..59473 | - | 1020 | WP_058108468.1 | hypothetical protein | - |
| LFZ28_RS25045 () | 60383..61114 | - | 732 | WP_058108469.1 | type III secretion system effector phosphothreonine lyase | - |
| LFZ28_RS25050 () | 61189..61437 | - | 249 | Protein_59 | hypothetical protein | - |
| LFZ28_RS25060 () | 62097..62525 | - | 429 | WP_058108470.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LFZ28_RS25065 () | 62522..62752 | - | 231 | WP_058108471.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LFZ28_RS25075 () | 63298..64260 | + | 963 | WP_058108472.1 | hypothetical protein | - |
| LFZ28_RS25080 () | 64261..64587 | + | 327 | WP_058108473.1 | hypothetical protein | - |
| LFZ28_RS25085 () | 64577..65365 | + | 789 | WP_058108474.1 | site-specific integrase | - |
| LFZ28_RS25090 () | 65869..66564 | + | 696 | WP_000389613.1 | CPBP family intramembrane metalloprotease | - |
| LFZ28_RS26560 () | 67179..67331 | - | 153 | WP_001838496.1 | hypothetical protein | - |
| LFZ28_RS25100 () | 67445..69559 | - | 2115 | WP_114159175.1 | peptidase domain-containing ABC transporter | - |
| LFZ28_RS25105 () | 69534..70808 | - | 1275 | WP_201264602.1 | HlyD family secretion protein | - |
| LFZ28_RS25110 () | 70913..71386 | - | 474 | WP_058108496.1 | toxin-activating lysine-acyltransferase | - |
| LFZ28_RS25115 () | 71409..72959 | - | 1551 | WP_058108477.1 | hypothetical protein | - |
| LFZ28_RS25120 () | 73643..74023 | + | 381 | Protein_71 | tyrosine-type recombinase/integrase | - |
| LFZ28_RS25125 () | 74123..74999 | + | 877 | Protein_72 | IS3 family transposase | - |
| LFZ28_RS25130 () | 75082..75783 | - | 702 | WP_201264603.1 | replication initiation protein | - |
| LFZ28_RS25135 () | 76386..77282 | + | 897 | WP_058108498.1 | LysR family transcriptional regulator | - |
| LFZ28_RS25140 () | 77260..78048 | - | 789 | WP_058108480.1 | substrate-binding domain-containing protein | - |
| LFZ28_RS25145 () | 78050..79348 | - | 1299 | WP_058108481.1 | MFS transporter | - |
| LFZ28_RS25150 () | 79814..81205 | - | 1392 | WP_058108482.1 | GntP family permease | - |
| LFZ28_RS25155 () | 81302..82609 | - | 1308 | WP_058108483.1 | histidinol dehydrogenase | - |
| LFZ28_RS25160 () | 82789..83811 | + | 1023 | WP_058108484.1 | LacI family DNA-binding transcriptional regulator | - |
| LFZ28_RS25165 () | 84251..85117 | + | 867 | WP_058108485.1 | AAA family ATPase | - |
| LFZ28_RS25170 () | 85117..86148 | + | 1032 | WP_058108486.1 | ParB/RepB/Spo0J family partition protein | - |
| LFZ28_RS25175 () | 86148..86585 | + | 438 | WP_058108487.1 | hypothetical protein | - |
| LFZ28_RS26565 () | 86582..86905 | + | 324 | WP_058108488.1 | hypothetical protein | - |
| LFZ28_RS25185 () | 86944..87987 | - | 1044 | Protein_84 | translesion error-prone DNA polymerase V subunit UmuC | - |
| LFZ28_RS25190 () | 88076..90211 | - | 2136 | WP_058108192.1 | tyrosine-type recombinase/integrase | - |
| LFZ28_RS25195 () | 90222..91169 | - | 948 | WP_114159163.1 | site-specific integrase | - |
| LFZ28_RS25200 () | 91272..91499 | - | 228 | Protein_87 | DNA polymerase V subunit UmuC | - |
| LFZ28_RS25205 () | 91499..91921 | - | 423 | WP_114159179.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LFZ28_RS25215 () | 92448..92918 | + | 471 | WP_114159183.1 | hypothetical protein | - |
| LFZ28_RS25220 () | 92911..93267 | + | 357 | WP_064239928.1 | hypothetical protein | - |
| LFZ28_RS26570 () | 93649..93720 | + | 72 | Protein_91 | DNA methylase | - |
| LFZ28_RS25230 () | 93802..95502 | - | 1701 | WP_058108386.1 | group II intron reverse transcriptase/maturase | - |
| LFZ28_RS25235 () | 96083..96733 | + | 651 | WP_058108387.1 | DNA methylase | - |
| LFZ28_RS25240 () | 96733..96954 | + | 222 | WP_001109588.1 | hypothetical protein | - |
| LFZ28_RS25245 () | 97010..97423 | + | 414 | WP_058108388.1 | DUF1380 family protein | - |
| LFZ28_RS25250 () | 97495..98259 | + | 765 | WP_058108389.1 | hypothetical protein | - |
| LFZ28_RS25260 () | 98755..99189 | + | 435 | WP_058108390.1 | antirestriction protein | - |
| LFZ28_RS25265 () | 99256..99690 | + | 435 | WP_073998955.1 | DUF1380 family protein | - |
| LFZ28_RS25270 () | 99918..100175 | + | 258 | WP_201264601.1 | DNA polymerase III subunit theta | - |
| LFZ28_RS25275 () | 100365..100817 | + | 453 | WP_058108391.1 | N-acetyltransferase | - |
| LFZ28_RS25280 () | 100974..101624 | + | 651 | WP_058108392.1 | IS66 family insertion sequence hypothetical protein | - |
| LFZ28_RS25285 () | 101624..101971 | + | 348 | WP_000624618.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| LFZ28_RS25290 () | 101991..103562 | + | 1572 | WP_058108393.1 | IS66 family transposase | - |
| LFZ28_RS26450 () | 103992..104207 | + | 216 | WP_058108394.1 | hypothetical protein | - |
| LFZ28_RS25300 () | 104475..105032 | + | 558 | WP_058108396.1 | single-stranded DNA-binding protein | - |
| LFZ28_RS25305 () | 105085..105327 | + | 243 | WP_058108491.1 | DUF905 domain-containing protein | - |
| LFZ28_RS25310 () | 105396..107426 | + | 2031 | WP_058108397.1 | ParB/RepB/Spo0J family partition protein | - |
| LFZ28_RS25315 () | 107468..107899 | + | 432 | WP_058108398.1 | conjugation system SOS inhibitor PsiB | - |
| LFZ28_RS25320 () | 107896..108624 | + | 729 | WP_058108399.1 | plasmid SOS inhibition protein A | - |
| LFZ28_RS25325 () | 108617..108826 | + | 210 | WP_058108400.1 | hypothetical protein | - |
| LFZ28_RS25330 () | 108953..109888 | + | 936 | WP_058108401.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| LFZ28_RS26455 () | 109984..110268 | - | 285 | WP_162802313.1 | hypothetical protein | - |
| LFZ28_RS25335 () | 110530..110829 | + | 300 | WP_058108402.1 | hypothetical protein | - |
| LFZ28_RS25340 () | 110877..111074 | + | 198 | WP_058108492.1 | hypothetical protein | - |
| LFZ28_RS25345 () | 111178..111999 | + | 822 | WP_058108403.1 | DUF945 domain-containing protein | - |
| LFZ28_RS25350 () | 112321..112791 | - | 471 | WP_058108493.1 | transglycosylase SLT domain-containing protein | - |
| LFZ28_RS25360 () | 113206..113586 | + | 381 | WP_058108405.1 | relaxosome protein TraM | - |
| LFZ28_RS25365 () | 113779..114477 | + | 699 | WP_058108406.1 | hypothetical protein | - |
| LFZ28_RS25370 () | 114607..114825 | + | 219 | WP_073998956.1 | TraY domain-containing protein | - |
| LFZ28_RS25375 () | 114864..115226 | + | 363 | WP_058108407.1 | type IV conjugative transfer system pilin TraA | - |
| LFZ28_RS25380 () | 115241..115552 | + | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| LFZ28_RS25385 () | 115574..116140 | + | 567 | WP_021003395.1 | type IV conjugative transfer system protein TraE | - |
| LFZ28_RS25390 () | 116127..116867 | + | 741 | WP_058108408.1 | type-F conjugative transfer system secretin TraK | - |
| LFZ28_RS25395 () | 116867..118276 | + | 1410 | WP_114159186.1 | conjugal transfer protein TraB | - |
| LFZ28_RS25400 () | 118277..118873 | + | 597 | WP_058108410.1 | conjugal transfer protein TraP | - |
| LFZ28_RS25405 () | 118851..119096 | + | 246 | WP_077950176.1 | DUF2689 domain-containing protein | - |
| LFZ28_RS25410 () | 119093..119608 | + | 516 | WP_001079997.1 | type IV conjugative transfer system lipoprotein TraV | - |
| LFZ28_RS25415 () | 119743..119964 | + | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| LFZ28_RS25420 () | 119957..120424 | + | 468 | WP_058108412.1 | hypothetical protein | - |
| LFZ28_RS25425 () | 120421..120804 | + | 384 | WP_042827805.1 | hypothetical protein | - |
| LFZ28_RS25430 () | 120820..123468 | + | 2649 | WP_025388521.1 | type IV secretion system protein TraC | - |
| LFZ28_RS25435 () | 123443..123829 | + | 387 | WP_000105164.1 | type-F conjugative transfer system protein TrbI | - |
| LFZ28_RS25440 () | 123826..124458 | + | 633 | WP_044127367.1 | type-F conjugative transfer system protein TraW | - |
| LFZ28_RS25445 () | 124455..125441 | + | 987 | WP_058108413.1 | conjugal transfer pilus assembly protein TraU | - |
| LFZ28_RS25450 () | 125460..125768 | + | 309 | WP_077950177.1 | hypothetical protein | - |
| LFZ28_RS25455 () | 125753..126391 | + | 639 | WP_058108414.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| LFZ28_RS25460 () | 126564..126983 | + | 420 | WP_058108415.1 | HNH endonuclease | - |
| LFZ28_RS25465 () | 126980..128806 | + | 1827 | WP_058108416.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| LFZ28_RS25470 () | 128817..129032 | + | 216 | WP_058108417.1 | conjugal transfer protein TrbE | - |
| LFZ28_RS25475 () | 129044..129793 | + | 750 | WP_044127374.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| LFZ28_RS25480 () | 130007..130300 | + | 294 | WP_001233881.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LFZ28_RS25485 () | 130287..130835 | + | 549 | WP_000055840.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| LFZ28_RS25490 () | 130825..132207 | + | 1383 | WP_058108418.1 | conjugal transfer protein TraH | - |
| LFZ28_RS25495 () | 132204..135026 | + | 2823 | WP_058108419.1 | conjugal transfer mating pair stabilization protein TraG | - |
| LFZ28_RS25500 () | 135048..135530 | + | 483 | WP_000787664.1 | hypothetical protein | - |
| LFZ28_RS25505 () | 135776..136507 | + | 732 | WP_058108420.1 | complement resistance protein TraT | - |
| LFZ28_RS25510 () | 136884..139145 | + | 2262 | WP_058108421.1 | type IV conjugative transfer system coupling protein TraD | - |
| LFZ28_RS25515 () | 139154..139552 | - | 399 | WP_058108422.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| LFZ28_RS25520 () | 139552..139779 | - | 228 | WP_000450263.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| LFZ28_RS25525 () | 139861..145119 | + | 5259 | WP_058108423.1 | conjugative transfer relaxase/helicase TraI | - |
| LFZ28_RS25530 () | 145139..145879 | + | 741 | WP_000177631.1 | conjugal transfer pilus acetylase TraX | - |
| LFZ28_RS25535 () | 145934..146497 | + | 564 | WP_058108424.1 | fertility inhibition protein FinO | - |
| LFZ28_RS25540 () | 146614..146906 | + | 293 | Protein_153 | hypothetical protein | - |
| LFZ28_RS25545 () | 146919..147074 | + | 156 | WP_024138419.1 | hypothetical protein | - |
| LFZ28_RS25550 () | 147241..147679 | + | 439 | Protein_155 | phospholipase | - |
| LFZ28_RS25560 () | 147858..148124 | + | 267 | WP_001576653.1 | replication regulatory protein RepA | - |
| LFZ28_RS25565 () | 148374..148451 | + | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|