MGE detailed information
MGE type: Conjugative plasmid MGE length: 70197 bp
Accession: NZ_CP029578 Location: 1..70197 Organism: Escherichia coli strain DA33135 Replicon: plasmid pDA33135-70
Accession: NZ_CP029578 Location: 1..70197 Organism: Escherichia coli strain DA33135 Replicon: plasmid pDA33135-70
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DLJ63_RS27090 () | 20..1013 | + | 994 | Protein_1 | conjugal transfer pilus assembly protein TraU | - |
| DLJ63_RS27100 () | 1043..1348 | + | 306 | WP_000224418.1 | hypothetical protein | - |
| DLJ63_RS27105 () | 1357..1995 | + | 639 | WP_001080251.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| DLJ63_RS27110 () | 2023..3828 | + | 1806 | Protein_4 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| DLJ63_RS27115 () | 3855..4112 | + | 258 | WP_000864314.1 | conjugal transfer protein TrbE | - |
| DLJ63_RS27120 () | 4105..4848 | + | 744 | WP_001030385.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| DLJ63_RS27125 () | 4862..5203 | + | 342 | WP_001298557.1 | conjugal transfer protein TrbA | - |
| DLJ63_RS27130 () | 5184..5519 | - | 336 | WP_000736414.1 | hypothetical protein | - |
| DLJ63_RS27135 () | 5600..5884 | + | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| DLJ63_RS27140 () | 5871..6416 | + | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| DLJ63_RS27145 () | 6346..6693 | + | 348 | WP_011666494.1 | P-type conjugative transfer protein TrbJ | - |
| DLJ63_RS27150 () | 6641..7066 | + | 426 | WP_001348758.1 | F-type conjugal transfer protein TrbF | - |
| DLJ63_RS27155 () | 7053..8426 | + | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| DLJ63_RS27160 () | 8423..11248 | + | 2826 | WP_110046572.1 | conjugal transfer mating pair stabilization protein TraG | - |
| DLJ63_RS27165 () | 11245..11754 | + | 510 | WP_000628111.1 | conjugal transfer entry exclusion protein TraS | - |
| DLJ63_RS27170 () | 11768..12499 | + | 732 | WP_012881123.1 | complement resistance protein TraT | - |
| DLJ63_RS27175 () | 12702..13439 | + | 738 | WP_012881122.1 | hypothetical protein | - |
| DLJ63_RS27180 () | 13490..15733 | + | 2244 | WP_110046574.1 | type IV conjugative transfer system coupling protein TraD | - |
| DLJ63_RS27185 () | 15733..21003 | + | 5271 | WP_000948349.1 | Multifunctional conjugation protein TraI | Relaxase |
| DLJ63_RS27190 () | 21023..21769 | + | 747 | WP_016240490.1 | conjugal transfer pilus acetylase TraX | - |
| DLJ63_RS27195 () | 21828..22688 | + | 861 | WP_000704523.1 | putative protein YcjY | VF |
| DLJ63_RS27200 () | 22791..23351 | + | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| DLJ63_RS27205 () | 23480..23692 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| DLJ63_RS27210 () | 23937..24398 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| DLJ63_RS27215 () | 24444..24653 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| DLJ63_RS27220 () | 24691..24900 | + | 210 | Protein_26 | hypothetical protein | - |
| DLJ63_RS27225 () | 24964..25668 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| DLJ63_RS27230 () | 25723..26109 | + | 387 | Protein_28 | DUF2726 domain-containing protein | - |
| DLJ63_RS27235 () | 26264..26737 | + | 474 | WP_016240489.1 | hypothetical protein | - |
| - () | 26880..26939 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 26880..26939 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 26880..26939 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 26880..26939 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| DLJ63_RS27245 () | 26984..27133 | + | 150 | WP_001312851.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| DLJ63_RS27250 () | 27418..27666 | + | 249 | WP_000083839.1 | replication regulatory protein RepA | - |
| DLJ63_RS27260 () | 27911..27985 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| DLJ63_RS27265 () | 27978..28835 | + | 858 | WP_162543890.1 | incFII family plasmid replication initiator RepA | - |
| DLJ63_RS27275 () | 29748..30017 | + | 270 | WP_012881119.1 | ABC transporter ATPase | Antitoxin Detail |
| DLJ63_RS27280 () | 30014..30295 | + | 282 | WP_012881118.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DLJ63_RS27285 () | 30341..31189 | + | 849 | WP_012881117.1 | 3'-5' exonuclease | - |
| DLJ63_RS27290 () | 31306..31788 | + | 483 | WP_001311056.1 | hypothetical protein | - |
| DLJ63_RS27295 () | 31823..32929 | - | 1107 | Protein_38 | IS5 family transposase IS903B | Transposase |
| DLJ63_RS27300 () | 33381..34256 | - | 876 | WP_001617865.1 | Beta-lactamase CTX-M-97 | ARG |
| DLJ63_RS27305 () | 34506..35768 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| DLJ63_RS27310 () | 36112..37299 | - | 1188 | WP_025999368.1 | MFS transporter | - |
| DLJ63_RS27315 () | 37356..38117 | - | 762 | WP_000020504.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| DLJ63_RS27320 () | 38117..39154 | - | 1038 | WP_001545318.1 | Hemin transport system permease protein HmuU | VF |
| DLJ63_RS27325 () | 39154..40152 | - | 999 | WP_012881113.1 | ABC transporter substrate-binding protein | - |
| DLJ63_RS27330 () | 40302..40460 | - | 159 | Protein_45 | integrase core domain-containing protein | - |
| DLJ63_RS27335 () | 40503..40745 | - | 243 | Protein_46 | helix-turn-helix domain-containing protein | - |
| DLJ63_RS27345 () | 41003..41353 | - | 351 | WP_001414994.1 | plasmid partitioning/stability family protein | - |
| DLJ63_RS27350 () | 41356..42318 | - | 963 | WP_000959878.1 | plasmid segregation protein ParM | - |
| DLJ63_RS27355 () | 42465..42758 | + | 294 | WP_032142565.1 | hypothetical protein | - |
| DLJ63_RS27360 () | 42834..43517 | + | 684 | WP_016240486.1 | DNA methylase | - |
| DLJ63_RS27365 () | 43518..43739 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| DLJ63_RS27370 () | 43753..44187 | + | 435 | WP_015058992.1 | DUF1380 family protein | - |
| DLJ63_RS28050 () | 44232..45002 | + | 771 | WP_015058993.1 | hypothetical protein | - |
| DLJ63_RS27385 () | 45538..45840 | + | 303 | WP_072115680.1 | antirestriction protein | - |
| DLJ63_RS27390 () | 45887..46309 | + | 423 | WP_000271739.1 | DUF1380 family protein | - |
| DLJ63_RS27395 () | 46306..46497 | + | 192 | WP_001027511.1 | hypothetical protein | - |
| DLJ63_RS27405 () | 46776..47024 | - | 249 | WP_071587243.1 | hypothetical protein | - |
| DLJ63_RS27415 () | 47540..47770 | + | 231 | WP_000218644.1 | hypothetical protein | - |
| DLJ63_RS27420 () | 47822..49183 | + | 1362 | WP_000170713.1 | DUF3560 domain-containing protein | - |
| DLJ63_RS27425 () | 49230..49793 | + | 564 | WP_016240496.1 | class I SAM-dependent methyltransferase | - |
| DLJ63_RS27435 () | 49879..50328 | - | 450 | WP_110046579.1 | hypothetical protein | - |
| DLJ63_RS27445 () | 50630..51157 | + | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| DLJ63_RS27450 () | 51215..51448 | + | 234 | WP_000006003.1 | DUF905 family protein | - |
| DLJ63_RS27455 () | 51509..53473 | + | 1965 | WP_000117316.1 | ParB/RepB/Spo0J family partition protein | - |
| DLJ63_RS27460 () | 53542..53976 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| DLJ63_RS27465 () | 53973..54692 | + | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| - () | 54704..54928 | + | 225 | NuclAT_0 | - | - |
| - () | 54704..54928 | + | 225 | NuclAT_0 | - | - |
| - () | 54704..54928 | + | 225 | NuclAT_0 | - | - |
| - () | 54704..54928 | + | 225 | NuclAT_0 | - | - |
| DLJ63_RS27875 () | 54713..54892 | - | 180 | WP_001309233.1 | hypothetical protein | - |
| - () | 54861..54926 | + | 66 | - | - | Antitoxin Detail |
| DLJ63_RS27470 () | 54972..55130 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| DLJ63_RS28055 () | 55368..55745 | - | 378 | Protein_69 | hypothetical protein | - |
| DLJ63_RS27490 () | 56045..56341 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| DLJ63_RS27495 () | 56452..57273 | + | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| DLJ63_RS27500 () | 57570..58172 | - | 603 | WP_000243713.1 | hypothetical protein | VF |
| DLJ63_RS27510 () | 58495..58878 | + | 384 | WP_001354030.1 | relaxosome protein TraM | - |
| DLJ63_RS27515 () | 59072..59743 | + | 672 | WP_000283561.1 | conjugal transfer transcriptional regulator TraJ | - |
| DLJ63_RS27520 () | 59880..60107 | + | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| DLJ63_RS27525 () | 60140..60499 | + | 360 | WP_001098992.1 | type IV conjugative transfer system pilin TraA | - |
| DLJ63_RS27530 () | 60514..60825 | + | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| DLJ63_RS27535 () | 60847..61413 | + | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| DLJ63_RS27540 () | 61400..62128 | + | 729 | WP_001230772.1 | type-F conjugative transfer system secretin TraK | - |
| DLJ63_RS27545 () | 62128..63579 | + | 1452 | WP_000146675.1 | conjugal transfer protein TraB | - |
| DLJ63_RS27550 () | 63548..64135 | + | 588 | WP_001444176.1 | conjugal transfer protein TraP | - |
| DLJ63_RS27555 () | 64074..64442 | + | 369 | WP_001315561.1 | conjugal transfer protein TrbD | - |
| DLJ63_RS27560 () | 64439..64954 | + | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| DLJ63_RS27565 () | 65089..65310 | + | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| DLJ63_RS27570 () | 65303..65779 | + | 477 | WP_000549587.1 | hypothetical protein | - |
| DLJ63_RS27575 () | 65859..66077 | + | 219 | WP_000556745.1 | hypothetical protein | - |
| DLJ63_RS27880 () | 66105..66452 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| DLJ63_RS27585 () | 66578..69208 | + | 2631 | WP_000069752.1 | type IV secretion system protein TraC | - |
| DLJ63_RS27590 () | 69205..69591 | + | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|