MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 92537 bp
Accession: NZ_CP028585 Location: 1..92537 Organism: Escherichia coli strain WCHEC4533 Replicon: plasmid p1_000533
Accession: NZ_CP028585 Location: 1..92537 Organism: Escherichia coli strain WCHEC4533 Replicon: plasmid p1_000533
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DBR03_RS00010 () | 118..921 | + | 804 | WP_087503506.1 | hypothetical protein | - |
| DBR03_RS00015 () | 992..1450 | + | 459 | WP_087503507.1 | hypothetical protein | - |
| DBR03_RS00020 () | 1604..2062 | - | 459 | WP_072650276.1 | hypothetical protein | - |
| DBR03_RS00025 () | 2081..2473 | - | 393 | WP_032342084.1 | hypothetical protein | - |
| DBR03_RS00030 () | 2632..4329 | + | 1698 | WP_032342068.1 | hypothetical protein | - |
| DBR03_RS00035 () | 4477..4755 | + | 279 | WP_087503508.1 | Ig-like domain-containing protein | - |
| DBR03_RS00040 () | 4823..6481 | + | 1659 | WP_087503509.1 | phage tail protein | - |
| DBR03_RS00045 () | 6525..7259 | + | 735 | WP_000801017.1 | hypothetical protein | - |
| DBR03_RS00050 () | 7327..7899 | + | 573 | WP_087503510.1 | hypothetical protein | - |
| DBR03_RS00055 () | 7908..8399 | + | 492 | WP_000012433.1 | hypothetical protein | - |
| DBR03_RS00060 () | 8454..9005 | + | 552 | WP_000187854.1 | hypothetical protein | - |
| DBR03_RS00065 () | 9021..9728 | + | 708 | WP_000021878.1 | hypothetical protein | - |
| DBR03_RS00070 () | 10110..10865 | - | 756 | WP_001077897.1 | RepB family plasmid replication initiator protein | - |
| DBR03_RS00075 () | 11254..12075 | + | 822 | WP_001025048.1 | hypothetical protein | - |
| DBR03_RS00080 () | 12090..15200 | + | 3111 | Protein_15 | transglycosylase | - |
| DBR03_RS00085 () | 15897..16526 | + | 630 | Protein_16 | transglycosylase | - |
| DBR03_RS00090 () | 16532..16906 | + | 375 | WP_087503511.1 | hypothetical protein | - |
| DBR03_RS00095 () | 16903..18333 | + | 1431 | WP_023908648.1 | bleomycin hydrolase | - |
| DBR03_RS00100 () | 18344..19189 | + | 846 | WP_023908647.1 | hypothetical protein | - |
| DBR03_RS26885 () | 19284..19730 | + | 447 | WP_064761104.1 | hypothetical protein | - |
| DBR03_RS00110 () | 19733..21619 | + | 1887 | WP_108161039.1 | tail fiber protein | - |
| DBR03_RS00115 () | 21619..22233 | + | 615 | WP_000072166.1 | tail fiber assembly protein | - |
| DBR03_RS00120 () | 22240..22695 | - | 456 | WP_001573915.1 | phage tail protein | - |
| DBR03_RS00125 () | 22723..23151 | - | 429 | WP_072172283.1 | phage tail protein | - |
| DBR03_RS00130 () | 23223..23795 | + | 573 | WP_000904922.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| DBR03_RS00135 () | 24012..24338 | + | 327 | WP_053919841.1 | holin | - |
| DBR03_RS00140 () | 24338..24784 | + | 447 | WP_000526264.1 | hypothetical protein | - |
| DBR03_RS00145 () | 24774..25394 | + | 621 | WP_073714457.1 | hypothetical protein | - |
| DBR03_RS00150 () | 25387..27324 | + | 1938 | WP_087503513.1 | head protein | - |
| DBR03_RS00155 () | 27324..27698 | + | 375 | WP_060877123.1 | hypothetical protein | - |
| DBR03_RS00160 () | 27815..29023 | + | 1209 | WP_080028495.1 | IS200-IS605 family transposase IS609 | Transposase |
| DBR03_RS00165 () | 29130..30515 | + | 1386 | WP_060877101.1 | hypothetical protein | - |
| DBR03_RS00175 () | 30580..32262 | + | 1683 | WP_087503519.1 | phage portal protein | - |
| DBR03_RS00180 () | 32276..33274 | + | 999 | WP_001191134.1 | hypothetical protein | - |
| DBR03_RS00185 () | 33475..34437 | + | 963 | WP_087503520.1 | lytic replication protein | - |
| DBR03_RS00190 () | 34852..35076 | + | 225 | WP_000245715.1 | host cell division inhibitor Icd-like protein | - |
| DBR03_RS00195 () | 35076..35783 | + | 708 | WP_052936018.1 | Rha family transcriptional regulator | - |
| DBR03_RS00200 () | 35783..35980 | + | 198 | WP_001344836.1 | hypothetical protein | - |
| DBR03_RS00205 () | 36013..36498 | - | 486 | WP_001273800.1 | TIGR02594 family protein | - |
| DBR03_RS00210 () | 36650..43486 | + | 6837 | WP_087503521.1 | DEAD/DEAH box helicase family protein | - |
| DBR03_RS00215 () | 43523..43957 | + | 435 | WP_074470334.1 | olxA | - |
| DBR03_RS00220 () | 43960..44220 | + | 261 | WP_074470335.1 | hypothetical protein | - |
| DBR03_RS00225 () | 44555..44851 | + | 297 | WP_086252943.1 | VRR-NUC domain-containing protein | - |
| DBR03_RS00230 () | 44866..45066 | + | 201 | WP_001238268.1 | hypothetical protein | - |
| DBR03_RS00235 () | 45081..45362 | + | 282 | WP_050586432.1 | hypothetical protein | - |
| DBR03_RS00240 () | 45476..46684 | + | 1209 | WP_000077919.1 | hypothetical protein | - |
| DBR03_RS00275 () | 49044..49478 | + | 435 | WP_000467090.1 | tellurite resistance TerB family protein | - |
| DBR03_RS00280 () | 49478..49642 | + | 165 | WP_000579539.1 | DUF3927 family protein | - |
| DBR03_RS26890 () | 50292..50867 | + | 576 | WP_000928280.1 | hypothetical protein | - |
| DBR03_RS26895 () | 50867..51259 | + | 393 | WP_023908618.1 | hypothetical protein | - |
| DBR03_RS00300 () | 51368..51760 | + | 393 | WP_000435256.1 | hypothetical protein | - |
| DBR03_RS00305 () | 52141..53121 | + | 981 | WP_031325887.1 | hypothetical protein | - |
| DBR03_RS00310 () | 53121..54629 | + | 1509 | WP_000897063.1 | hypothetical protein | - |
| DBR03_RS26900 () | 54657..55694 | - | 1038 | WP_023908617.1 | hypothetical protein | - |
| DBR03_RS00320 () | 56089..57117 | + | 1029 | WP_087503522.1 | tyrosine-type recombinase/integrase | - |
| DBR03_RS00325 () | 57192..57536 | + | 345 | WP_087503523.1 | hypothetical protein | - |
| DBR03_RS00330 () | 57533..58009 | + | 477 | WP_087503524.1 | hypothetical protein | - |
| DBR03_RS00335 () | 58006..58500 | + | 495 | WP_000640903.1 | dUTP diphosphatase | - |
| DBR03_RS00340 () | 58515..59177 | + | 663 | WP_060877112.1 | DUF2829 domain-containing protein | - |
| DBR03_RS00345 () | 59184..59951 | + | 768 | WP_087503525.1 | hypothetical protein | - |
| DBR03_RS00350 () | 59941..61035 | + | 1095 | WP_087503526.1 | hypothetical protein | - |
| DBR03_RS00355 () | 61071..61451 | - | 381 | WP_001216041.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| DBR03_RS00360 () | 61451..61672 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| DBR03_RS00365 () | 61745..62134 | - | 390 | WP_032153799.1 | DNA repair protein | - |
| DBR03_RS00370 () | 62258..62509 | - | 252 | WP_032153798.1 | DNA polymerase III subunit theta | - |
| DBR03_RS00375 () | 62512..62712 | - | 201 | WP_001408980.1 | hypothetical protein | - |
| DBR03_RS00380 () | 62824..63594 | - | 771 | WP_087503527.1 | hypothetical protein | - |
| DBR03_RS00385 () | 63591..63899 | - | 309 | WP_087503528.1 | hypothetical protein | - |
| DBR03_RS00390 () | 63899..64192 | - | 294 | WP_087503529.1 | hypothetical protein | - |
| DBR03_RS00395 () | 64205..64621 | - | 417 | WP_063074823.1 | hypothetical protein | - |
| DBR03_RS00400 () | 64907..65167 | - | 261 | WP_087503530.1 | eaa protein | - |
| DBR03_RS00405 () | 65164..65853 | - | 690 | WP_087503531.1 | DUF551 domain-containing protein | - |
| DBR03_RS00410 () | 65850..66059 | - | 210 | WP_000951710.1 | hypothetical protein | - |
| DBR03_RS00415 () | 66061..66249 | - | 189 | WP_000797279.1 | hypothetical protein | - |
| DBR03_RS00420 () | 66595..67041 | - | 447 | WP_047647121.1 | ead/Ea22-like family protein | - |
| DBR03_RS00425 () | 67038..67658 | - | 621 | WP_087503532.1 | ead/Ea22-like family protein | - |
| DBR03_RS00430 () | 67655..67846 | - | 192 | WP_060877081.1 | DUF1382 family protein | - |
| DBR03_RS00435 () | 67843..67929 | - | 87 | WP_108161037.1 | DUF4752 family protein | - |
| DBR03_RS00440 () | 67943..68938 | - | 996 | WP_087503533.1 | DUF968 domain-containing protein | - |
| DBR03_RS00445 () | 69035..69703 | - | 669 | WP_087503534.1 | metallophosphoesterase | - |
| DBR03_RS00450 () | 69740..70948 | - | 1209 | WP_108161038.1 | IS200-IS605 family transposase IS609 | Transposase |
| DBR03_RS00455 () | 70973..71038 | + | 66 | Protein_82 | transposase | - |
| DBR03_RS00460 () | 71060..71371 | - | 312 | WP_001092152.1 | hypothetical protein | - |
| DBR03_RS00465 () | 71368..71592 | - | 225 | WP_023908608.1 | hypothetical protein | - |
| DBR03_RS00470 () | 71570..71863 | - | 294 | WP_023908607.1 | DUF4752 family protein | - |
| DBR03_RS00475 () | 71860..72108 | - | 249 | WP_023908606.1 | hypothetical protein | - |
| DBR03_RS00480 () | 72105..72746 | - | 642 | WP_087503498.1 | ead/Ea22-like family protein | - |
| DBR03_RS00485 () | 72743..73252 | - | 510 | WP_087503499.1 | hypothetical protein | - |
| DBR03_RS26905 () | 73251..73391 | + | 141 | WP_001436214.1 | hypothetical protein | - |
| DBR03_RS00495 () | 73556..74179 | - | 624 | WP_000240859.1 | DUF4406 domain-containing protein | - |
| DBR03_RS00500 () | 74452..75030 | + | 579 | WP_087503500.1 | recombinase | - |
| DBR03_RS26910 () | 75362..75529 | + | 168 | WP_162983138.1 | hypothetical protein | - |
| DBR03_RS00505 () | 75703..75822 | + | 120 | WP_071526433.1 | ash family protein | - |
| DBR03_RS00510 () | 75841..76056 | + | 216 | WP_022630900.1 | host cell division inhibitor Icd-like protein | - |
| DBR03_RS00515 () | 76056..76982 | + | 927 | WP_072275558.1 | Rha family transcriptional regulator | - |
| DBR03_RS00520 () | 77042..77353 | + | 312 | WP_000717724.1 | hypothetical protein | - |
| DBR03_RS00525 () | 77350..77577 | - | 228 | WP_001396850.1 | hypothetical protein | - |
| DBR03_RS00530 () | 77763..78371 | - | 609 | WP_032323273.1 | hypothetical protein | - |
| DBR03_RS00535 () | 78655..79308 | + | 654 | WP_000410954.1 | hypothetical protein | - |
| DBR03_RS00540 () | 79645..79926 | + | 282 | WP_032323275.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DBR03_RS00545 () | 79935..80216 | + | 282 | WP_032323276.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| DBR03_RS00550 () | 80309..80638 | + | 330 | WP_000542383.1 | hypothetical protein | - |
| DBR03_RS00555 () | 80631..81824 | + | 1194 | WP_063074560.1 | hypothetical protein | - |
| DBR03_RS00560 () | 81858..82586 | - | 729 | WP_080077649.1 | hypothetical protein | - |
| DBR03_RS00565 () | 82608..82808 | - | 201 | WP_001022420.1 | hypothetical protein | - |
| DBR03_RS00570 () | 82865..83203 | - | 339 | WP_000806445.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| DBR03_RS00575 () | 83274..83576 | - | 303 | WP_000162415.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DBR03_RS00580 () | 83739..84530 | + | 792 | WP_063074813.1 | hypothetical protein | - |
| DBR03_RS00585 () | 84527..85294 | + | 768 | WP_000203293.1 | hypothetical protein | - |
| DBR03_RS00590 () | 85298..86278 | + | 981 | WP_069936439.1 | tail length tape measure protein | - |
| DBR03_RS00595 () | 86275..86928 | + | 654 | WP_087503501.1 | baseplate protein | - |
| DBR03_RS00600 () | 86988..87893 | + | 906 | WP_087503502.1 | recombination-associated protein RdgC | - |
| DBR03_RS00605 () | 87877..88557 | + | 681 | WP_000812238.1 | hypothetical protein | - |
| DBR03_RS00610 () | 88550..89455 | + | 906 | WP_087503503.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| DBR03_RS00615 () | 89600..89884 | - | 285 | WP_087503504.1 | hypothetical protein | - |
| DBR03_RS00620 () | 89877..90518 | - | 642 | WP_087503505.1 | AAA family ATPase | - |
| DBR03_RS00625 () | 90797..91135 | - | 339 | WP_052930744.1 | plasmid stabilization protein | - |
| DBR03_RS00630 () | 91148..92104 | - | 957 | WP_001217888.1 | recombinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|