MGE detailed information
MGE type: Conjugative plasmid MGE length: 70129 bp
Accession: NZ_CP027554 Location: 1..70129 Organism: Escherichia coli strain 2013C-3513 Replicon: plasmid unnamed1
Accession: NZ_CP027554 Location: 1..70129 Organism: Escherichia coli strain 2013C-3513 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6991_RS32010 () | 1..287 | + | 287 | Protein_0 | DNA helicase | - |
| C6991_RS32015 () | 268..525 | + | 258 | WP_202973277.1 | protein traI | - |
| C6991_RS00010 () | 545..1291 | + | 747 | WP_016230917.1 | conjugal transfer pilus acetylase TraX | - |
| C6991_RS00015 () | 1346..1906 | + | 561 | WP_106881366.1 | fertility inhibition protein FinO | - |
| C6991_RS00020 () | 2038..2250 | + | 213 | WP_001301409.1 | ANR family transcriptional regulator | - |
| C6991_RS00025 () | 2495..2956 | + | 462 | WP_000978819.1 | thermonuclease family protein | - |
| C6991_RS00030 () | 3002..3211 | + | 210 | WP_001333231.1 | hemolysin expression modulator Hha | - |
| C6991_RS00035 () | 3249..3839 | + | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| C6991_RS00040 () | 4078..4326 | + | 249 | WP_000083839.1 | replication regulatory protein RepA | - |
| C6991_RS00050 () | 4571..4645 | + | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| C6991_RS00055 () | 4638..5494 | + | 857 | Protein_10 | incFII family plasmid replication initiator RepA | - |
| C6991_RS31450 () | 6195..6335 | + | 141 | WP_021503378.1 | hypothetical protein | - |
| C6991_RS00065 () | 6408..6677 | + | 270 | WP_000079939.1 | hypothetical protein | Antitoxin Detail |
| C6991_RS31405 () | 6674..6838 | + | 165 | WP_001388374.1 | hypothetical protein | Toxin Detail |
| C6991_RS00070 () | 6886..7809 | + | 924 | WP_001415483.1 | hypothetical protein | - |
| C6991_RS00080 () | 8251..8631 | + | 381 | WP_001696636.1 | HTH domain-containing protein | - |
| C6991_RS00085 () | 8743..9147 | + | 405 | Protein_16 | IS91 family transposase ISPps1 | Transposase |
| C6991_RS00090 () | 9254..10090 | - | 837 | WP_000480972.1 | hypothetical protein | ARG |
| C6991_RS00095 () | 10090..10893 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| C6991_RS00100 () | 10954..11768 | - | 815 | Protein_19 | Dihydropteroate synthase | ARG |
| C6991_RS00115 () | 12105..12308 | + | 204 | WP_000131876.1 | hypothetical protein | - |
| C6991_RS00120 () | 12299..12520 | + | 222 | WP_001251694.1 | hypothetical protein | - |
| C6991_RS00125 () | 12755..13084 | - | 330 | WP_001415369.1 | hypothetical protein | - |
| C6991_RS00130 () | 13271..14131 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| C6991_RS00135 () | 14422..15126 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| C6991_RS32020 () | 15350..15528 | + | 179 | Protein_25 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C6991_RS00145 () | 15599..16480 | + | 882 | WP_000005461.1 | hypothetical protein | - |
| C6991_RS00150 () | 16415..16834 | - | 420 | WP_024181414.1 | hypothetical protein | - |
| C6991_RS00155 () | 16943..17293 | - | 351 | WP_001414994.1 | plasmid partitioning/stability family protein | - |
| C6991_RS00160 () | 17296..18258 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| C6991_RS00170 () | 18793..19695 | + | 903 | WP_001513647.1 | DUF1281 domain-containing protein | - |
| C6991_RS00175 () | 19692..20003 | + | 312 | WP_032144809.1 | hypothetical protein | - |
| C6991_RS00180 () | 20080..20763 | + | 684 | WP_000085884.1 | DNA methylase | - |
| C6991_RS00185 () | 20764..20985 | + | 222 | WP_001104865.1 | hypothetical protein | - |
| C6991_RS00190 () | 20999..21433 | + | 435 | WP_000274447.1 | DUF1380 family protein | - |
| C6991_RS32025 () | 21478..22248 | + | 771 | WP_001006247.1 | hypothetical protein | - |
| C6991_RS00205 () | 22787..23089 | + | 303 | WP_072126845.1 | antirestriction protein | - |
| C6991_RS00210 () | 23136..23558 | + | 423 | WP_000271709.1 | DUF1380 family protein | - |
| C6991_RS00215 () | 23555..23746 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| C6991_RS00220 () | 24066..24659 | + | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| C6991_RS00225 () | 24772..25977 | - | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| C6991_RS00230 () | 26059..26682 | + | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| C6991_RS31455 () | 26800..27048 | - | 249 | WP_071703862.1 | hypothetical protein | - |
| C6991_RS00245 () | 27560..27790 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| C6991_RS00250 () | 27842..29202 | + | 1361 | Protein_44 | DUF3560 domain-containing protein | - |
| C6991_RS00255 () | 29247..29810 | + | 564 | WP_001311069.1 | class I SAM-dependent methyltransferase | - |
| C6991_RS00265 () | 29962..30222 | + | 261 | WP_071600428.1 | hypothetical protein | - |
| C6991_RS00280 () | 30695..31222 | + | 528 | WP_000290816.1 | single-stranded DNA-binding protein | - |
| C6991_RS00285 () | 31278..31511 | + | 234 | WP_058653442.1 | DUF905 domain-containing protein | - |
| C6991_RS00290 () | 31570..33528 | + | 1959 | WP_058653444.1 | ParB/RepB/Spo0J family partition protein | - |
| C6991_RS00295 () | 33583..34017 | + | 435 | WP_000845949.1 | conjugation system SOS inhibitor PsiB | - |
| C6991_RS00300 () | 34014..34733 | + | 720 | WP_033807739.1 | plasmid SOS inhibition protein A | - |
| - () | 34745..34969 | + | 225 | NuclAT_0 | - | - |
| - () | 34745..34969 | + | 225 | NuclAT_0 | - | - |
| - () | 34745..34969 | + | 225 | NuclAT_0 | - | - |
| - () | 34745..34969 | + | 225 | NuclAT_0 | - | - |
| - () | 34902..34967 | + | 66 | - | - | Antitoxin Detail |
| C6991_RS00310 () | 35013..35171 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| C6991_RS31460 () | 35409..35786 | - | 378 | Protein_53 | hypothetical protein | - |
| C6991_RS00325 () | 36086..36382 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| C6991_RS00330 () | 36493..37314 | + | 822 | WP_021503380.1 | DUF945 domain-containing protein | - |
| C6991_RS00335 () | 37610..38257 | - | 648 | WP_072208664.1 | hypothetical protein | VF |
| C6991_RS00340 () | 38543..38926 | + | 384 | WP_001151564.1 | relaxosome protein TraM | - |
| C6991_RS00345 () | 39120..39806 | + | 687 | WP_000332487.1 | PAS domain-containing protein | - |
| C6991_RS00350 () | 39901..40128 | + | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| C6991_RS00355 () | 40162..40521 | + | 360 | WP_019842162.1 | type IV conjugative transfer system pilin TraA | - |
| C6991_RS00360 () | 40536..40847 | + | 312 | WP_000012111.1 | type IV conjugative transfer system protein TraL | - |
| C6991_RS00365 () | 40869..41435 | + | 567 | WP_021503373.1 | type IV conjugative transfer system protein TraE | - |
| C6991_RS00370 () | 41422..42150 | + | 729 | WP_001230809.1 | type-F conjugative transfer system secretin TraK | - |
| C6991_RS00375 () | 42150..43599 | + | 1450 | Protein_64 | conjugal transfer protein TraB | - |
| C6991_RS00380 () | 43568..44155 | + | 588 | WP_023908347.1 | conjugal transfer protein TraP | - |
| C6991_RS00385 () | 44094..44462 | + | 369 | WP_071802386.1 | DUF2689 domain-containing protein | - |
| C6991_RS00390 () | 44455..44706 | + | 252 | WP_021503369.1 | conjugal transfer protein TrbG | - |
| C6991_RS00395 () | 44703..45218 | + | 516 | WP_021503364.1 | type IV conjugative transfer system lipoprotein TraV | - |
| C6991_RS00400 () | 45353..45574 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| C6991_RS00405 () | 45567..45980 | + | 414 | WP_021503371.1 | hypothetical protein | - |
| C6991_RS00410 () | 45973..46446 | + | 474 | WP_021503376.1 | hypothetical protein | - |
| C6991_RS00415 () | 46526..46744 | + | 219 | WP_016230909.1 | hypothetical protein | - |
| C6991_RS31465 () | 46772..47119 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| C6991_RS00425 () | 47246..49875 | + | 2630 | Protein_74 | type IV secretion system protein TraC | - |
| C6991_RS00430 () | 49934..50257 | + | 324 | WP_072257200.1 | type-F conjugative transfer system protein TrbI | - |
| C6991_RS00435 () | 50254..50886 | + | 633 | WP_001203727.1 | type-F conjugative transfer system protein TraW | - |
| C6991_RS00440 () | 50883..51875 | + | 993 | WP_000830190.1 | conjugal transfer pilus assembly protein TraU | - |
| C6991_RS00445 () | 51905..52210 | + | 306 | WP_000224413.1 | hypothetical protein | - |
| C6991_RS00450 () | 52219..52857 | + | 639 | WP_001080257.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| C6991_RS00455 () | 52854..54704 | + | 1851 | WP_021503368.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| C6991_RS00460 () | 54731..54988 | + | 258 | WP_000864319.1 | conjugal transfer protein TrbE | - |
| C6991_RS00465 () | 54981..55724 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| C6991_RS00470 () | 55740..56078 | + | 339 | WP_021503383.1 | conjugal transfer protein TrbA | - |
| C6991_RS00475 () | 56205..56489 | + | 285 | WP_000623730.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| C6991_RS00480 () | 56476..57021 | + | 546 | WP_000059832.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| C6991_RS00485 () | 56951..57292 | + | 342 | WP_071802387.1 | P-type conjugative transfer protein TrbJ | - |
| C6991_RS00490 () | 57240..57665 | + | 426 | WP_001448114.1 | F-type conjugal transfer protein TrbF | - |
| C6991_RS00495 () | 57652..59025 | + | 1374 | WP_001137361.1 | conjugal transfer protein TraH | - |
| C6991_RS00500 () | 59022..61842 | + | 2821 | Protein_89 | conjugal transfer mating pair stabilization protein TraG | - |
| C6991_RS00505 () | 61861..62357 | + | 497 | Protein_90 | entry exclusion protein | - |
| C6991_RS00510 () | 62389..63120 | + | 732 | WP_021503382.1 | complement resistance protein TraT | - |
| C6991_RS00515 () | 63323..64060 | + | 738 | WP_021503363.1 | hypothetical protein | - |
| C6991_RS00520 () | 64111..66368 | + | 2258 | Protein_93 | type IV conjugative transfer system coupling protein TraD | - |
| C6991_RS32030 () | 66368..70129 | + | 3762 | Protein_94 | conjugative transfer relaxase/helicase TraI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|