NZ_CP0275511..162810

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 162810 bp
Accession: NZ_CP027551        Location: 1..162810         Organism: Escherichia coli strain 2015C-4136CT1       Replicon: plasmid unnamed


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
C6950_RS25355 () 1420..1653 - 234 WP_000006030.1 DUF905 family protein -
C6950_RS25360 () 1715..2254 - 540 WP_009426937.1 single-stranded DNA-binding protein -
C6950_RS26905 () 2280..2486 - 207 WP_000547971.1 hypothetical protein -
C6950_RS25375 () 2727..2978 - 252 WP_071828952.1 hypothetical protein -
C6950_RS25385 () 3130..3693 - 564 WP_001377760.1 class I SAM-dependent methyltransferase -
C6950_RS25390 () 3740..5101 - 1362 WP_000170675.1 DUF3560 domain-containing protein -
C6950_RS25395 () 5153..5382 - 230 Protein_7 hypothetical protein -
C6950_RS26910 () 5900..6441 + 542 Protein_8 hypothetical protein -
C6950_RS25410 () 6420..6611 - 192 WP_001027519.1 hypothetical protein -
C6950_RS25415 () 6608..7030 - 423 WP_032197515.1 DUF1380 family protein -
C6950_RS25420 () 7077..7379 - 303 WP_014653258.1 antirestriction protein -
C6950_RS25430 () 7811..9403 - 1593 WP_062860097.1 IS66 family transposase ISEc47 Transposase
C6950_RS25435 () 9434..9784 - 351 WP_000624677.1 IS66 family transposase IS682 Transposase
C6950_RS25440 () 9781..10200 - 420 WP_000422671.1 IS66 family transposase ISEc23 Transposase
C6950_RS25445 () 10676..10855 + 180 Protein_15 transposase domain-containing protein -
C6950_RS25455 () 11202..11417 - 216 Protein_16 IS3 family transposase ISEc31 Transposase
C6950_RS26980 () 11418..12158 - 741 Protein_17 transposase -
C6950_RS25475 () 12294..12580 - 287 Protein_18 type II toxin-antitoxin system RelE/ParE family toxin -
C6950_RS25480 () 12577..12828 - 252 WP_001132891.1 type II toxin-antitoxin system Phd/YefM family antitoxin -
C6950_RS25485 () 13350..14321 - 972 WP_062862136.1 ParB/RepB/Spo0J family plasmid partition protein -
C6950_RS25490 () 14321..15487 - 1167 WP_062860116.1 plasmid-partitioning protein SopA -
C6950_RS26925 () 15911..16051 - 141 Protein_22 transposase -
C6950_RS25495 () 16061..16966 - 906 Protein_23 IS3 family transposase ISLad1 Transposase
C6950_RS25500 () 17031..18182 + 1152 WP_062860185.1 IS30 family transposase IS30D Transposase
C6950_RS25505 () 18195..18452 - 258 Protein_25 IS3 family transposase IS911 Transposase
C6950_RS25515 () 18524..19166 - 643 Protein_26 IS21 family transposase IS100 Transposase
C6950_RS25520 () 19163..19973 - 811 Protein_27 transposase -
C6950_RS25525 () 20395..20763 + 369 WP_053264260.1 DUF305 domain-containing protein -
C6950_RS25530 () 20750..21811 + 1062 WP_062860125.1 hypothetical protein -
C6950_RS25540 () 22657..23070 + 414 WP_062859980.1 hypothetical protein -
C6950_RS25545 () 23021..23878 + 858 Protein_31 IS91 family transposase ISEc37 Transposase
C6950_RS25555 () 25137..25469 + 333 Protein_33 IS91 family transposase ISEc37 Transposase
C6950_RS26730 () 25892..26137 + 246 WP_064577908.1 hypothetical protein -
C6950_RS25565 () 26418..26831 + 414 WP_062859980.1 hypothetical protein -
C6950_RS25570 () 26782..27979 + 1198 Protein_36 IS91 family transposase -
C6950_RS25580 () 28145..29353 + 1209 WP_106878861.1 IS256 family transposase IS1414 Transposase
C6950_RS25585 () 29390..30499 - 1110 Protein_38 alpha-galactosidase -
C6950_RS25590 () 30572..31598 - 1027 Protein_39 substrate-binding domain-containing protein -
C6950_RS25595 () 31688..32709 - 1022 Protein_40 IS3 family transposase -
C6950_RS25600 () 32623..33309 + 687 WP_077878401.1 Tyrosine recombinase XerD VF
C6950_RS25605 () 34263..35372 + 1110 WP_025263474.1 porin OmpC -
C6950_RS25610 () 35532..36299 - 768 WP_062859902.1 helix-turn-helix domain-containing protein -
C6950_RS25625 () 37199..37792 + 594 Protein_44 proQ/FINO family protein -
C6950_RS25630 () 38237..39433 + 1197 WP_062859901.1 IS110 family transposase ISEc20 Transposase
C6950_RS25635 () 39459..40349 - 891 Protein_46 IS3 family transposase ISKpn38 Transposase
C6950_RS25640 () 40422..40604 + 183 Protein_47 iron-containing alcohol dehydrogenase -
C6950_RS25645 () 40759..41493 - 735 WP_000578339.1 helix-turn-helix domain-containing protein -
C6950_RS25650 () 41583..41891 + 309 WP_062859900.1 PerC family transcriptional regulator -
C6950_RS25655 () 42050..42388 + 339 WP_025263478.1 c-type lysozyme inhibitor -
C6950_RS26735 () 42945..43085 - 141 WP_152930419.1 hypothetical protein -
C6950_RS25665 () 43168..44011 + 844 Protein_52 IS3 family transposase IS1351 Transposase
C6950_RS25670 () 44042..45634 - 1593 WP_062860097.1 IS66 family transposase ISEc47 Transposase
C6950_RS25675 () 45665..46015 - 351 WP_000624677.1 IS66 family transposase IS682 Transposase
C6950_RS25680 () 46012..46431 - 420 WP_000422671.1 IS66 family transposase ISEc23 Transposase
C6950_RS25685 () 46590..46880 + 291 WP_062860084.1 type II toxin-antitoxin system RelE/ParE family toxin -
C6950_RS25690 () 47168..47371 - 204 WP_062860083.1 hypothetical protein -
C6950_RS25695 () 47361..47566 + 206 Protein_58 hypothetical protein -
C6950_RS25700 () 47741..51238 - 3498 WP_062860082.1 Outer membrane protein IcsA autotransporter VF
C6950_RS25705 () 51826..52071 - 246 Protein_60 IS91 family transposase ISEc37 Transposase
C6950_RS25710 () 52133..52291 - 159 Protein_61 AAA family ATPase -
C6950_RS25715 () 52362..52580 - 219 Protein_62 integrase core domain-containing protein -
C6950_RS25720 () 52668..53087 + 420 WP_000422671.1 IS66 family transposase ISEc23 Transposase
C6950_RS25725 () 53084..53434 + 351 WP_000624677.1 IS66 family transposase IS682 Transposase
C6950_RS25730 () 53465..55057 + 1593 WP_106878862.1 IS66 family transposase ISEc47 Transposase
C6950_RS25735 () 55150..55992 + 843 Protein_66 IS66 family transposase ISEc8 Transposase
C6950_RS26930 () 56016..56150 - 135 Protein_67 IS66 family insertion sequence element accessory protein TnpB -
C6950_RS25745 () 56218..56526 + 309 Protein_68 IS256 family transposase IS1414 Transposase
C6950_RS25750 () 56557..58149 - 1593 WP_006703274.1 IS66 family transposase ISEc47 Transposase
C6950_RS25755 () 58180..58530 - 351 WP_000624677.1 IS66 family transposase IS682 Transposase
C6950_RS25760 () 58527..58946 - 420 WP_000422671.1 IS66 family transposase ISEc23 Transposase
C6950_RS25765 () 59032..60342 + 1311 Protein_72 conjugal transfer protein TraB -
C6950_RS25770 () 60332..60511 + 180 Protein_73 conjugal transfer protein TraP -
C6950_RS25775 () 60498..60896 - 399 Protein_74 IS3 family transposase ISBope1 Transposase
C6950_RS25785 () 61275..61550 + 276 WP_062860182.1 hypothetical protein -
C6950_RS25790 () 61762..65859 + 4098 WP_064768262.1 Temperature-sensitive hemagglutinin tsh autotransporter VF
C6950_RS25795 () 66194..66613 + 420 WP_000422671.1 IS66 family transposase ISEc23 Transposase
C6950_RS25800 () 66610..66960 + 351 WP_000624677.1 IS66 family transposase IS682 Transposase
C6950_RS25805 () 66991..68583 + 1593 WP_074453947.1 IS66 family transposase ISEc47 Transposase
C6950_RS26740 () 68613..68738 - 126 Protein_80 conjugal transfer protein TrbB -
C6950_RS25810 () 68738..69409 - 672 WP_062859934.1 type-F conjugative transfer system secretin TraK -
C6950_RS25815 () 69452..70018 - 567 WP_000399792.1 type IV conjugative transfer system protein TraE -
C6950_RS25820 () 70040..70351 - 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
C6950_RS25825 () 70366..70764 - 399 WP_000340280.1 type IV conjugative transfer system pilin TraA -
C6950_RS25830 () 70798..71025 - 228 WP_077878533.1 conjugal transfer relaxosome protein TraY -
C6950_RS25835 () 71145..71608 - 464 Protein_86 conjugal transfer protein TrbJ -
C6950_RS25840 () 71699..71893 - 195 Protein_87 conjugal transfer protein TrbJ -
C6950_RS25845 () 72085..72469 - 385 Protein_88 relaxosome protein TraM -
C6950_RS25850 () 72745..73392 + 648 WP_139118357.1 hypothetical protein VF
C6950_RS25855 () 73688..74509 - 822 WP_001234469.1 DUF945 domain-containing protein -
C6950_RS25860 () 74628..74914 - 287 Protein_91 hypothetical protein -
C6950_RS25870 () 75111..75362 - 252 WP_071828952.1 hypothetical protein -
C6950_RS26935 () 75349..75681 - 333 WP_168796711.1 hypothetical protein -
C6950_RS25875 () 75645..76547 - 903 WP_136503197.1 DUF1281 domain-containing protein -
C6950_RS25885 () 76986..77945 + 960 WP_000921958.1 plasmid segregation protein ParM -
C6950_RS25890 () 77945..78340 + 396 WP_000445930.1 plasmid partitioning/stability family protein -
C6950_RS25895 () 78709..79917 - 1209 WP_074466352.1 IS256 family transposase IS1414 Transposase
C6950_RS25900 () 79991..81012 + 1022 Protein_98 alpha-galactosidase -
C6950_RS25905 () 81075..81188 + 114 Protein_99 MFS transporter -
C6950_RS25910 () 81183..81482 - 300 Protein_100 IS3 family transposase IS2 Transposase
C6950_RS25915 () 81481..81936 + 456 Protein_101 IS3 family transposase -
C6950_RS25920 () 81969..82511 + 543 Protein_102 IS3 family transposase ISEc48 Transposase
C6950_RS26940 () 82699..83262 + 564 WP_062860118.1 Major structural subunit of bundle-forming pilus VF
C6950_RS25930 () 83517..84170 - 654 Protein_104 IS3 family transposase IS629 Transposase
C6950_RS26945 () 84167..84352 + 186 Protein_105 IS91 family transposase -
C6950_RS25940 () 84522..84654 - 133 Protein_106 phage integrase family protein -
C6950_RS25945 () 84655..84960 - 306 WP_001159871.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
C6950_RS25950 () 84962..85180 - 219 WP_062860119.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
C6950_RS25960 () 85776..86020 + 245 Protein_109 hypothetical protein -
C6950_RS25965 () 86020..86610 + 591 WP_062860120.1 hypothetical protein -
C6950_RS26950 () 86735..87598 - 864 WP_062860121.1 IS3 family transposase ISEcB1 Transposase
C6950_RS26955 () 87574..88080 - 507 WP_062897179.1 IS3 family transposase ISEcB1 Transposase
C6950_RS25975 () 88385..89200 + 816 WP_062860059.1 helix-turn-helix transcriptional regulator -
C6950_RS25980 () 89440..89577 - 138 WP_062860058.1 IS3 family transposase IS1351 Transposase
C6950_RS25985 () 89588..89719 - 132 WP_062860057.1 IS3 family transposase IS1351 Transposase
C6950_RS25995 () 90417..91498 + 1082 WP_101750278.1 IS3 family transposase ISEc16 Transposase
C6950_RS26005 () 92068..92844 + 777 WP_062860055.1 helix-turn-helix transcriptional regulator -
C6950_RS26010 () 93080..93739 + 660 Protein_118 IS4 family transposase ISEc60 Transposase
C6950_RS26015 () 93750..94138 - 389 Protein_119 IS256 family transposase ISEic2 Transposase
C6950_RS26020 () 94424..94804 - 381 WP_062860054.1 Major structural subunit of bundle-forming pilus VF
C6950_RS26030 () 96469..96597 - 129 Protein_122 IS3 family transposase ISEc16 Transposase
C6950_RS26035 () 97063..97512 - 450 WP_062860050.1 hypothetical protein VF
C6950_RS26040 () 97515..98003 - 489 WP_062860049.1 hypothetical protein VF
C6950_RS26045 () 97993..98541 - 549 WP_062860048.1 hypothetical protein VF
C6950_RS26050 () 98538..99077 - 540 WP_062860047.1 hypothetical protein VF
C6950_RS26055 () 99097..99543 - 447 WP_062860046.1 hypothetical protein VF
C6950_RS26060 () 99525..100274 - 750 WP_062860045.1 Leader peptidase PppA VF
C6950_RS26065 () 100281..101237 - 957 WP_062860044.1 ComG operon protein 1 VF
C6950_RS26070 () 101256..102314 - 1059 WP_062860043.1 Toxin coregulated pilus biosynthesis protein E VF
C6950_RS26075 () 102321..103927 - 1607 Protein_131 Toxin coregulated pilus biosynthesis protein T VF
C6950_RS26960 () 103934..104434 - 501 WP_199851710.1 hypothetical protein VF
C6950_RS26080 () 104414..105613 - 1200 Protein_133 hypothetical protein VF
C6950_RS26085 () 105610..107268 - 1659 WP_062860040.1 Outer membrane lipoprotein BfpB VF
C6950_RS26090 () 107275..107676 - 402 WP_062860039.1 hypothetical protein VF
C6950_RS26095 () 107723..108304 - 582 WP_062860038.1 Major structural subunit of bundle-forming pilus VF
C6950_RS26100 () 108727..109465 + 739 Protein_137 site-specific integrase -
C6950_RS26105 () 109744..110721 - 978 WP_062860037.1 RepB family plasmid replication initiator protein -
C6950_RS26125 () 112119..112532 + 414 WP_062859980.1 hypothetical protein -
C6950_RS26130 () 112483..113680 + 1198 Protein_140 IS91 family transposase -
C6950_RS26135 () 114619..115479 + 861 WP_062859948.1 alpha/beta hydrolase -
C6950_RS26150 () 116438..117061 - 624 WP_062859950.1 proQ/FINO family protein -
C6950_RS26155 () 117121..117531 - 411 Protein_143 serine acetyltransferase -
C6950_RS26160 () 118044..118532 - 489 WP_062859951.1 GNAT family N-acetyltransferase Toxin Detail
C6950_RS26165 () 118520..118804 - 285 WP_073534343.1 DUF1778 domain-containing protein Antitoxin Detail
C6950_RS26180 () 119723..120745 - 1023 WP_096169364.1 replication initiation protein -
C6950_RS26185 () 120738..120812 - 75 WP_064716759.1 RepA leader peptide Tap -
C6950_RS26195 () 121053..121307 - 255 WP_000083830.1 replication regulatory protein RepA -
C6950_RS26200 () 121547..122137 - 591 WP_000766816.1 DUF2726 domain-containing protein -
C6950_RS26205 () 122176..122385 - 210 WP_001299729.1 hemolysin expression modulator Hha -
C6950_RS26210 () 122431..122892 - 462 WP_000978818.1 thermonuclease family protein -
C6950_RS26215 () 123138..123350 - 213 WP_001299730.1 ANR family transcriptional regulator -
C6950_RS26220 () 123486..124046 - 561 WP_001567328.1 fertility inhibition protein FinO -
C6950_RS26225 () 124101..124847 - 747 WP_071342686.1 conjugal transfer pilus acetylase TraX -
C6950_RS26230 () 124867..130137 - 5271 WP_106878866.1 Multifunctional conjugation protein TraI Relaxase
C6950_RS26235 () 130137..132326 - 2190 WP_106878867.1 type IV conjugative transfer system coupling protein TraD -
C6950_RS26240 () 132608..133087 - 480 WP_001382783.1 hypothetical protein -
C6950_RS26245 () 133291..134022 - 732 WP_000782451.1 complement resistance protein TraT -
C6950_RS26250 () 134071..134556 - 486 WP_000605865.1 hypothetical protein -
C6950_RS26255 () 134572..137394 - 2823 WP_106878868.1 conjugal transfer mating pair stabilization protein TraG -
C6950_RS26260 () 137391..138764 - 1374 WP_054191925.1 conjugal transfer protein TraH -
C6950_RS26265 () 138751..139176 - 426 WP_071782351.1 F-type conjugal transfer protein TrbF -
C6950_RS26270 () 139130..139471 - 342 WP_071849770.1 P-type conjugative transfer protein TrbJ -
C6950_RS26275 () 139401..139946 - 546 WP_054191927.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
C6950_RS26280 () 139933..140214 - 282 WP_000549793.1 type-F conjugative transfer system pilin chaperone TraQ -
C6950_RS26285 () 140330..141073 - 744 WP_001030371.1 type-F conjugative transfer system pilin assembly protein TraF -
C6950_RS26290 () 141066..141323 - 258 WP_053264198.1 conjugal transfer protein TrbE -
C6950_RS26295 () 141350..143137 - 1788 WP_062898178.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
C6950_RS26300 () 143448..143828 - 381 WP_000174466.1 hypothetical protein -
C6950_RS26305 () 143825..144463 - 639 WP_024233422.1 type-F conjugative transfer system pilin assembly protein TrbC -
C6950_RS26310 () 144472..145464 - 993 WP_000830839.1 conjugal transfer pilus assembly protein TraU -
C6950_RS26315 () 145461..146093 - 633 WP_001203720.1 type-F conjugative transfer system protein TraW -
C6950_RS26320 () 146090..146476 - 387 WP_000214096.1 type-F conjugative transfer system protein TrbI -
C6950_RS26325 () 146473..149103 - 2631 WP_062859975.1 type IV secretion system protein TraC -
C6950_RS26745 () 149229..149591 - 363 WP_029400175.1 hypothetical protein -
C6950_RS26335 () 149619..149837 - 219 WP_000556751.1 hypothetical protein -
C6950_RS26340 () 149917..150393 - 477 WP_062859976.1 hypothetical protein -
C6950_RS26345 () 150386..150607 - 222 WP_001278695.1 conjugal transfer protein TraR -
C6950_RS26350 () 150742..151257 - 516 WP_000809895.1 type IV conjugative transfer system lipoprotein TraV -
C6950_RS26355 () 151254..151622 - 369 WP_062859977.1 conjugal transfer protein TrbD -
C6950_RS26360 () 151561..152151 - 591 WP_062897178.1 conjugal transfer protein TraP -
C6950_RS26365 () 152141..153568 - 1428 WP_074464844.1 conjugal transfer protein TraB -
C6950_RS26370 () 153568..154272 - 705 WP_158707952.1 type-F conjugative transfer system secretin TraK -
C6950_RS26375 () 154283..154849 - 567 WP_000399792.1 type IV conjugative transfer system protein TraE -
C6950_RS26380 () 154871..155182 - 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
C6950_RS26385 () 155197..155595 - 399 WP_062859933.1 type IV conjugative transfer system pilin TraA -
C6950_RS26390 () 155629..155868 - 240 WP_042357785.1 conjugal transfer relaxosome protein TraY -
C6950_RS26395 () 155976..156623 - 648 WP_074464494.1 transcriptional regulator TraJ family protein -
C6950_RS26400 () 156815..157198 - 384 WP_001151530.1 relaxosome protein TraM -
C6950_RS26405 () 157612..158121 + 510 Protein_190 hypothetical protein VF
C6950_RS26410 () 158417..159238 - 822 WP_074453754.1 DUF945 domain-containing protein -
C6950_RS26965 () 159357..159539 - 183 WP_170979925.1 hypothetical protein -
C6950_RS26970 () 159668..159874 - 207 WP_062897188.1 hypothetical protein -
C6950_RS26435 () 160565..160723 - 159 WP_062860169.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
- () 160767..160991 - 225 NuclAT_0 - Antitoxin Detail
- () 160767..160991 - 225 NuclAT_0 - Antitoxin Detail
- () 160767..160991 - 225 NuclAT_0 - Antitoxin Detail
- () 160767..160991 - 225 NuclAT_0 - Antitoxin Detail
C6950_RS26750 () 160803..160991 + 189 WP_001299721.1 hypothetical protein -
C6950_RS26440 () 161003..161722 - 720 WP_024221815.1 plasmid SOS inhibition protein A -
C6950_RS26445 () 161719..162153 - 435 WP_062860170.1 conjugation system SOS inhibitor PsiB -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance