MGE detailed information
MGE type: Conjugative plasmid MGE length: 73262 bp
Accession: NZ_CP027455 Location: 1..73262 Organism: Escherichia coli strain 2014C-4423 Replicon: plasmid unnamed1
Accession: NZ_CP027455 Location: 1..73262 Organism: Escherichia coli strain 2014C-4423 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6W74_RS28385 () | 597..1229 | - | 633 | WP_106901575.1 | type-F conjugative transfer system protein TraW | - |
| C6W74_RS28390 () | 1226..1612 | - | 387 | WP_000214098.1 | type-F conjugative transfer system protein TrbI | - |
| C6W74_RS28395 () | 1609..4239 | - | 2631 | WP_106901576.1 | type IV secretion system protein TraC | - |
| C6W74_RS29825 () | 4365..4712 | - | 348 | WP_059336744.1 | hypothetical protein | - |
| C6W74_RS28405 () | 4709..5113 | - | 405 | WP_021572197.1 | hypothetical protein | - |
| C6W74_RS28410 () | 5110..5328 | - | 219 | WP_000556751.1 | hypothetical protein | - |
| C6W74_RS28415 () | 5408..5794 | - | 387 | WP_021572681.1 | hypothetical protein | - |
| C6W74_RS28420 () | 5791..6264 | - | 474 | WP_021553200.1 | hypothetical protein | - |
| C6W74_RS28425 () | 6257..6478 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| C6W74_RS28430 () | 6613..7128 | - | 516 | WP_106901577.1 | type IV conjugative transfer system lipoprotein TraV | - |
| C6W74_RS28435 () | 7125..7376 | - | 252 | WP_096949358.1 | conjugal transfer protein TrbG | - |
| C6W74_RS28440 () | 7369..7722 | - | 354 | WP_106901578.1 | conjugal transfer protein TrbD | - |
| C6W74_RS28445 () | 7676..8263 | - | 588 | WP_024223178.1 | conjugal transfer protein TraP | - |
| C6W74_RS28450 () | 8253..9680 | - | 1428 | WP_106901579.1 | conjugal transfer protein TraB | - |
| C6W74_RS28455 () | 9680..10384 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| C6W74_RS28460 () | 10395..10961 | - | 567 | WP_021553195.1 | type IV conjugative transfer system protein TraE | - |
| C6W74_RS28465 () | 10983..11294 | - | 312 | WP_021553194.1 | type IV conjugative transfer system protein TraL | - |
| C6W74_RS28470 () | 11309..11674 | - | 366 | WP_021553193.1 | type IV conjugative transfer system pilin TraA | - |
| C6W74_RS28475 () | 11708..11935 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| C6W74_RS28480 () | 12023..12715 | - | 693 | WP_021553192.1 | PAS domain-containing protein | - |
| C6W74_RS28485 () | 12907..13290 | - | 384 | WP_021553191.1 | relaxosome protein TraM | - |
| C6W74_RS28495 () | 13705..14214 | + | 510 | WP_021553190.1 | hypothetical protein | VF |
| C6W74_RS28500 () | 14510..15331 | - | 822 | WP_021553189.1 | DUF945 domain-containing protein | - |
| C6W74_RS28505 () | 15442..15738 | - | 297 | WP_021553188.1 | hypothetical protein | - |
| C6W74_RS28530 () | 16770..17444 | + | 675 | WP_106901533.1 | IS66 family transposase ISSfl3 | Transposase |
| C6W74_RS28535 () | 17441..17788 | + | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| C6W74_RS28540 () | 17808..19364 | + | 1557 | WP_001066419.1 | IS66 family transposase ISSfl3 | Transposase |
| C6W74_RS28545 () | 19393..19620 | - | 228 | WP_106901580.1 | hypothetical protein | - |
| C6W74_RS28550 () | 19679..20002 | - | 324 | WP_000533253.1 | hypothetical protein | - |
| C6W74_RS30055 () | 20298..20657 | + | 360 | WP_024223173.1 | hypothetical protein | - |
| C6W74_RS28570 () | 20892..21050 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 21094..21318 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 21094..21318 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 21094..21318 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 21094..21318 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| C6W74_RS28580 () | 21330..22049 | - | 720 | WP_021553187.1 | plasmid SOS inhibition protein A | - |
| C6W74_RS28585 () | 22046..22480 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| C6W74_RS28590 () | 22549..24514 | - | 1966 | Protein_34 | ParB/RepB/Spo0J family partition protein | - |
| C6W74_RS28595 () | 24578..24811 | - | 234 | WP_021553185.1 | DUF905 domain-containing protein | - |
| C6W74_RS28605 () | 24869..25390 | - | 522 | WP_021553184.1 | single-stranded DNA-binding protein | - |
| C6W74_RS30060 () | 25735..25959 | + | 225 | WP_013279293.1 | hypothetical protein | - |
| C6W74_RS28630 () | 26033..26257 | - | 225 | Protein_38 | hypothetical protein | - |
| C6W74_RS28635 () | 26283..26846 | - | 564 | WP_001315564.1 | class I SAM-dependent methyltransferase | - |
| C6W74_RS28640 () | 26894..28255 | - | 1362 | WP_014106968.1 | DUF3560 domain-containing protein | - |
| C6W74_RS28645 () | 28307..28537 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| C6W74_RS29840 () | 29055..29303 | + | 249 | WP_072208430.1 | hypothetical protein | - |
| C6W74_RS28660 () | 29576..29767 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| C6W74_RS28665 () | 29764..30186 | - | 423 | WP_021553180.1 | DUF1380 family protein | - |
| C6W74_RS28670 () | 30233..30535 | - | 303 | WP_072128676.1 | antirestriction protein | - |
| C6W74_RS30065 () | 31076..31852 | - | 777 | WP_021553179.1 | hypothetical protein | - |
| C6W74_RS28685 () | 31898..32332 | - | 435 | WP_021553178.1 | DUF1380 family protein | - |
| C6W74_RS28690 () | 32346..32567 | - | 222 | WP_001104885.1 | hypothetical protein | - |
| C6W74_RS28695 () | 32568..33251 | - | 684 | WP_021553177.1 | DNA methylase | - |
| C6W74_RS28700 () | 33328..33632 | - | 305 | Protein_50 | hypothetical protein | - |
| C6W74_RS28705 () | 33636..34538 | - | 903 | WP_106901586.1 | DUF1281 domain-containing protein | - |
| C6W74_RS28715 () | 34956..35204 | + | 249 | WP_000618111.1 | DinI-like family protein | - |
| C6W74_RS28720 () | 35201..35638 | + | 438 | WP_021553174.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| C6W74_RS28725 () | 35638..36909 | + | 1272 | WP_000457496.1 | Y-family DNA polymerase | - |
| C6W74_RS28730 () | 36914..37306 | - | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| C6W74_RS28735 () | 37311..38282 | - | 972 | WP_001103690.1 | hypothetical protein | - |
| C6W74_RS28740 () | 38511..39155 | + | 645 | WP_000633913.1 | AAA family ATPase | - |
| C6W74_RS28745 () | 39149..39424 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| C6W74_RS28750 () | 39562..40341 | - | 780 | WP_001302707.1 | site-specific integrase | - |
| C6W74_RS28755 () | 40392..41171 | - | 780 | WP_000535296.1 | hypothetical protein | - |
| C6W74_RS28760 () | 41224..41538 | - | 315 | WP_001302628.1 | hypothetical protein | - |
| C6W74_RS28765 () | 42109..42360 | + | 252 | WP_021553173.1 | hypothetical protein | - |
| C6W74_RS28770 () | 42360..42950 | + | 591 | WP_021553172.1 | hypothetical protein | - |
| C6W74_RS28775 () | 42968..43315 | - | 348 | WP_000142451.1 | hypothetical protein | - |
| C6W74_RS28785 () | 43667..43858 | - | 192 | WP_021553171.1 | hypothetical protein | - |
| C6W74_RS28790 () | 43965..44240 | - | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6W74_RS28795 () | 44240..44524 | - | 285 | WP_024223171.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| C6W74_RS28810 () | 45434..46291 | - | 858 | WP_021569951.1 | incFII family plasmid replication initiator RepA | - |
| C6W74_RS28815 () | 46284..46358 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| C6W74_RS28825 () | 46592..46849 | - | 258 | WP_021553168.1 | replication regulatory protein RepA | - |
| C6W74_RS28830 () | 47133..47282 | - | 150 | WP_001312851.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 47327..47386 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 47327..47386 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 47327..47386 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 47327..47386 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| C6W74_RS28840 () | 47529..48002 | - | 474 | WP_021553167.1 | hypothetical protein | - |
| C6W74_RS28845 () | 48157..48750 | - | 594 | WP_021553166.1 | DUF2726 domain-containing protein | - |
| C6W74_RS28850 () | 48788..48997 | - | 210 | WP_001333231.1 | hemolysin expression modulator Hha | - |
| C6W74_RS28855 () | 49043..49504 | - | 462 | WP_021553165.1 | thermonuclease family protein | - |
| C6W74_RS29845 () | 49506..50459 | - | 954 | Protein_76 | YadA-like family protein | - |
| C6W74_RS28865 () | 51877..52437 | - | 561 | WP_021569950.1 | fertility inhibition protein FinO | - |
| C6W74_RS28870 () | 52492..53238 | - | 747 | WP_021553161.1 | conjugal transfer pilus acetylase TraX | - |
| C6W74_RS28875 () | 53258..58528 | - | 5271 | Protein_79 | Multifunctional conjugation protein TraI | Relaxase |
| C6W74_RS28885 () | 58528..60726 | - | 2199 | WP_106901583.1 | type IV conjugative transfer system coupling protein TraD | - |
| C6W74_RS28890 () | 60978..61709 | - | 732 | WP_021569947.1 | complement resistance protein TraT | - |
| C6W74_RS28895 () | 61758..62243 | - | 486 | WP_077694318.1 | surface exclusion protein | - |
| C6W74_RS28900 () | 62259..65081 | - | 2823 | WP_021553156.1 | conjugal transfer mating pair stabilization protein TraG | - |
| C6W74_RS28905 () | 65078..66451 | - | 1374 | WP_199851517.1 | conjugal transfer protein TraH | - |
| C6W74_RS28910 () | 66438..66863 | - | 426 | WP_071779960.1 | F-type conjugal transfer protein TrbF | - |
| C6W74_RS28915 () | 66811..67158 | - | 348 | WP_071779959.1 | P-type conjugative transfer protein TrbJ | - |
| C6W74_RS28920 () | 67088..67633 | - | 546 | WP_021553231.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| C6W74_RS28925 () | 67620..67901 | - | 282 | WP_000049684.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| C6W74_RS28930 () | 67968..68414 | - | 447 | WP_024223186.1 | hypothetical protein | - |
| C6W74_RS28935 () | 68500..68862 | - | 363 | WP_021553229.1 | hypothetical protein | - |
| C6W74_RS28940 () | 68876..69619 | - | 744 | WP_021569946.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| C6W74_RS28945 () | 69612..69869 | - | 258 | WP_021569945.1 | conjugal transfer protein TrbE | - |
| C6W74_RS28950 () | 69896..71746 | - | 1851 | WP_021553226.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| C6W74_RS28955 () | 71743..72381 | - | 639 | WP_021553225.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| C6W74_RS28960 () | 72509..72843 | - | 335 | Protein_95 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|