MGE detailed information
MGE type: Conjugative plasmid MGE length: 125561 bp
Accession: NZ_CP027367 Location: 1..125561 Organism: Escherichia coli strain 89-3156 Replicon: plasmid unnamed
Accession: NZ_CP027367 Location: 1..125561 Organism: Escherichia coli strain 89-3156 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6P65_RS26295 () | 564..854 | - | 291 | WP_000538310.1 | hypothetical protein | - |
| C6P65_RS26305 () | 2969..3610 | + | 642 | WP_028985818.1 | hypothetical protein | - |
| C6P65_RS26315 () | 4450..5427 | + | 978 | WP_000361613.1 | RepB family plasmid replication initiator protein | - |
| C6P65_RS26320 () | 5712..6452 | - | 741 | WP_001066934.1 | tyrosine-type recombinase/integrase | - |
| C6P65_RS26330 () | 7120..8289 | + | 1170 | WP_028985819.1 | hypothetical protein | - |
| C6P65_RS26335 () | 8568..8851 | - | 284 | Protein_6 | IS3 family transposase | - |
| C6P65_RS26340 () | 8871..9529 | - | 659 | Protein_7 | transposase | - |
| C6P65_RS26345 () | 9865..10137 | - | 273 | WP_071827457.1 | Major pilu subunit operon regulatory protein PapB | VF |
| C6P65_RS26355 () | 11613..13583 | + | 1971 | WP_028985821.1 | Hemin receptor | VF |
| C6P65_RS26360 () | 13602..14393 | + | 792 | WP_028985822.1 | DUF4198 domain-containing protein | - |
| C6P65_RS26365 () | 14552..15121 | - | 570 | WP_028985823.1 | hypothetical protein | - |
| C6P65_RS26370 () | 15373..17241 | - | 1869 | WP_028985824.1 | Lipase | VF |
| C6P65_RS26375 () | 17320..19026 | - | 1707 | WP_106884366.1 | hypothetical protein | - |
| C6P65_RS26380 () | 19597..19800 | - | 204 | Protein_14 | hypothetical protein | - |
| C6P65_RS26385 () | 20191..20862 | - | 672 | Protein_15 | hypothetical protein | - |
| C6P65_RS26390 () | 21127..21330 | - | 204 | Protein_16 | hypothetical protein | - |
| C6P65_RS26400 () | 22027..22698 | - | 672 | Protein_17 | hypothetical protein | - |
| C6P65_RS26405 () | 22963..23166 | - | 204 | Protein_18 | hypothetical protein | - |
| C6P65_RS26415 () | 23863..24534 | - | 672 | Protein_19 | hypothetical protein | - |
| C6P65_RS26420 () | 24799..25002 | - | 204 | Protein_20 | hypothetical protein | - |
| C6P65_RS26430 () | 25699..26370 | - | 672 | Protein_21 | hypothetical protein | - |
| C6P65_RS26435 () | 26635..26838 | - | 204 | Protein_22 | hypothetical protein | - |
| C6P65_RS26445 () | 27535..28206 | - | 672 | Protein_23 | hypothetical protein | - |
| C6P65_RS26450 () | 28471..28674 | - | 204 | Protein_24 | hypothetical protein | - |
| C6P65_RS26455 () | 29554..30018 | - | 465 | Protein_25 | hypothetical protein | - |
| C6P65_RS26460 () | 30244..31491 | - | 1248 | WP_001620879.1 | HlyD family type I secretion periplasmic adaptor subunit | - |
| C6P65_RS26465 () | 31551..33698 | - | 2148 | WP_028985865.1 | Toxin RTX-I translocation ATP-binding protein | VF |
| C6P65_RS26470 () | 33695..34963 | - | 1269 | WP_032211973.1 | TolC family protein | - |
| C6P65_RS26475 () | 35021..35323 | - | 303 | WP_071978015.1 | Major pilu subunit operon regulatory protein PapB | VF |
| C6P65_RS26480 () | 35869..36194 | + | 326 | Protein_30 | IS3 family transposase ISEal1 | Transposase |
| C6P65_RS26490 () | 36281..37303 | + | 1023 | Protein_31 | IS21 family transposase IS100kyp | Transposase |
| C6P65_RS26495 () | 37300..38081 | + | 782 | Protein_32 | IS21 family transposase IS100 | Transposase |
| C6P65_RS26500 () | 38120..38272 | + | 153 | WP_028985868.1 | IS3 family transposase | - |
| C6P65_RS26510 () | 38510..40081 | - | 1572 | Protein_34 | IS66 family transposase ISCro1 | Transposase |
| C6P65_RS26515 () | 40101..40448 | - | 348 | WP_028985869.1 | IS66 family transposase ISCro1 | Transposase |
| C6P65_RS26520 () | 40448..41098 | - | 651 | WP_028985870.1 | IS66 family transposase IS679 | Transposase |
| C6P65_RS26525 () | 41228..42784 | - | 1557 | WP_028985871.1 | IS66 family transposase ISSfl3 | Transposase |
| C6P65_RS26530 () | 42804..43149 | - | 346 | Protein_38 | IS66 family insertion sequence element accessory protein TnpB | - |
| C6P65_RS26535 () | 43146..43820 | - | 675 | Protein_39 | transposase | - |
| C6P65_RS26545 () | 44156..44854 | - | 699 | WP_000431491.1 | lactate utilization protein C | - |
| C6P65_RS26550 () | 44859..46274 | - | 1416 | WP_000054157.1 | iron-sulfur cluster-binding protein | - |
| C6P65_RS26555 () | 46285..47004 | - | 720 | WP_001102132.1 | (Fe-S)-binding protein | - |
| C6P65_RS26560 () | 47054..48610 | - | 1557 | WP_000554413.1 | L-lactate permease | - |
| C6P65_RS26565 () | 48885..49109 | - | 225 | Protein_44 | IS3 family transposase IS1203 | Transposase |
| C6P65_RS26570 () | 49164..50197 | - | 1034 | Protein_45 | IS256 family transposase IS1414 | Transposase |
| C6P65_RS26575 () | 50290..50637 | - | 348 | WP_028985873.1 | hypothetical protein | - |
| C6P65_RS26590 () | 51311..52060 | - | 750 | Protein_47 | ISKra4 family transposase ISEc51 | Transposase |
| C6P65_RS26595 () | 52060..52398 | + | 339 | Protein_48 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| C6P65_RS26600 () | 52737..52976 | - | 240 | WP_000859017.1 | MarR family transcriptional regulator | - |
| C6P65_RS26605 () | 52989..53249 | - | 261 | WP_077745091.1 | hypothetical protein | - |
| C6P65_RS26620 () | 53951..54808 | - | 858 | WP_028985876.1 | incFII family plasmid replication initiator RepA | - |
| C6P65_RS26625 () | 54801..54875 | - | 75 | WP_001365571.1 | RepA leader peptide Tap | - |
| C6P65_RS26635 () | 55111..55368 | - | 258 | WP_000084404.1 | replication regulatory protein RepA | - |
| C6P65_RS26640 () | 55652..55858 | - | 207 | WP_032211975.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 55850..55906 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 55850..55906 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 55850..55906 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 55850..55906 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| C6P65_RS26650 () | 56081..56464 | - | 384 | WP_028985877.1 | hypothetical protein | - |
| C6P65_RS26655 () | 56567..57028 | - | 462 | WP_000760076.1 | thermonuclease family protein | - |
| C6P65_RS26665 () | 58128..58685 | - | 558 | WP_028985878.1 | fertility inhibition protein FinO | - |
| C6P65_RS26670 () | 58721..59089 | - | 369 | WP_000722534.1 | NirD/YgiW/YdeI family stress tolerance protein | - |
| C6P65_RS26675 () | 59172..59918 | - | 747 | WP_028985879.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| C6P65_RS26680 () | 59938..64808 | - | 4871 | Protein_60 | Multifunctional conjugation protein TraI | Relaxase |
| C6P65_RS26685 () | 64832..65206 | - | 375 | WP_158249645.1 | Multifunctional conjugation protein TraI | Relaxase |
| C6P65_RS26690 () | 65288..65515 | + | 228 | WP_000450527.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| C6P65_RS26695 () | 65515..65913 | + | 399 | WP_000911320.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| C6P65_RS26700 () | 65922..68102 | - | 2181 | WP_106884365.1 | type IV conjugative transfer system coupling protein TraD | - |
| C6P65_RS26705 () | 68384..68863 | - | 480 | WP_001473214.1 | hypothetical protein | - |
| C6P65_RS26710 () | 69067..69798 | - | 732 | WP_028985894.1 | complement resistance protein TraT | - |
| C6P65_RS26715 () | 69830..70327 | - | 498 | WP_032211977.1 | entry exclusion protein | - |
| C6P65_RS26720 () | 70343..73165 | - | 2823 | WP_028985893.1 | conjugal transfer mating pair stabilization protein TraG | - |
| C6P65_RS26725 () | 73162..74535 | - | 1374 | WP_000944332.1 | conjugal transfer protein TraH | - |
| C6P65_RS26730 () | 74522..74947 | - | 426 | WP_071532414.1 | F-type conjugal transfer protein TrbF | - |
| C6P65_RS26735 () | 74868..75243 | - | 376 | Protein_71 | P-type conjugative transfer protein TrbJ | - |
| C6P65_RS26740 () | 75173..75718 | - | 546 | WP_001457363.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| C6P65_RS26745 () | 75705..75995 | - | 291 | WP_021521297.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| C6P65_RS26755 () | 76391..76732 | - | 342 | WP_000556797.1 | conjugal transfer protein TrbA | - |
| C6P65_RS26760 () | 76746..77488 | - | 743 | Protein_75 | type-F conjugative transfer system pilin assembly protein TraF | - |
| C6P65_RS26765 () | 77481..77738 | - | 258 | WP_000864346.1 | conjugal transfer protein TrbE | - |
| C6P65_RS26770 () | 77752..79581 | - | 1830 | WP_028985892.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| C6P65_RS26775 () | 79750..80130 | - | 381 | WP_028985891.1 | hypothetical protein | - |
| C6P65_RS26780 () | 80127..80765 | - | 639 | WP_001035184.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| C6P65_RS26785 () | 80958..81197 | + | 240 | WP_001066128.1 | hypothetical protein | - |
| C6P65_RS26790 () | 81194..81373 | - | 180 | WP_000970212.1 | hypothetical protein | - |
| C6P65_RS26795 () | 81394..81518 | - | 125 | Protein_82 | TraU family protein | - |
| C6P65_RS26800 () | 81567..81944 | - | 378 | WP_001365598.1 | hypothetical protein | - |
| C6P65_RS26810 () | 82740..83282 | - | 543 | WP_032211976.1 | hypothetical protein | - |
| C6P65_RS26815 () | 83296..84288 | - | 993 | WP_000817328.1 | conjugal transfer pilus assembly protein TraU | - |
| C6P65_RS26820 () | 84285..84917 | - | 633 | WP_000877293.1 | type-F conjugative transfer system protein TraW | - |
| C6P65_RS26825 () | 84914..85300 | - | 387 | WP_028985889.1 | type-F conjugative transfer system protein TrbI | - |
| C6P65_RS26830 () | 85297..87924 | - | 2628 | WP_028985888.1 | type IV secretion system protein TraC | - |
| C6P65_RS26835 () | 88084..88305 | - | 222 | WP_001278980.1 | conjugal transfer protein TraR | - |
| C6P65_RS26840 () | 88440..88955 | - | 516 | WP_028985887.1 | type IV conjugative transfer system lipoprotein TraV | - |
| C6P65_RS26845 () | 88952..89320 | - | 369 | WP_071999535.1 | conjugal transfer protein TrbD | - |
| C6P65_RS26850 () | 89259..89846 | - | 588 | WP_000002895.1 | conjugal transfer protein TraP | - |
| C6P65_RS26855 () | 89836..91266 | - | 1431 | WP_000146622.1 | conjugal transfer protein TraB | - |
| C6P65_RS26860 () | 91266..91994 | - | 729 | WP_028985884.1 | type-F conjugative transfer system secretin TraK | - |
| C6P65_RS26865 () | 91981..92547 | - | 567 | WP_000399759.1 | type IV conjugative transfer system protein TraE | - |
| C6P65_RS26870 () | 92569..92880 | - | 312 | WP_000012099.1 | type IV conjugative transfer system protein TraL | - |
| C6P65_RS26875 () | 92895..93247 | - | 353 | Protein_97 | type IV conjugative transfer system pilin TraA | - |
| C6P65_RS26880 () | 93282..93521 | - | 240 | WP_050481378.1 | conjugal transfer relaxosome protein TraY | - |
| C6P65_RS26885 () | 93628..94275 | - | 648 | WP_028985882.1 | transcriptional regulator TraJ family protein | - |
| C6P65_RS26890 () | 94469..94852 | - | 384 | WP_001151535.1 | relaxosome protein TraM | - |
| C6P65_RS26895 () | 95128..95775 | + | 648 | WP_000602507.1 | hypothetical protein | VF |
| C6P65_RS26900 () | 96071..96892 | - | 822 | WP_001234499.1 | DUF945 domain-containing protein | - |
| C6P65_RS26905 () | 97011..97298 | - | 288 | WP_000107543.1 | hypothetical protein | - |
| C6P65_RS26915 () | 97455..97757 | - | 303 | WP_001272236.1 | hypothetical protein | - |
| C6P65_RS26930 () | 98683..98844 | - | 162 | WP_000775238.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 98890..99103 | - | 214 | NuclAT_0 | - | Antitoxin Detail |
| - () | 98890..99103 | - | 214 | NuclAT_0 | - | Antitoxin Detail |
| - () | 98890..99103 | - | 214 | NuclAT_0 | - | Antitoxin Detail |
| - () | 98890..99103 | - | 214 | NuclAT_0 | - | Antitoxin Detail |
| C6P65_RS26935 () | 99052..99366 | - | 315 | WP_001562885.1 | hypothetical protein | - |
| C6P65_RS26940 () | 99363..100082 | - | 720 | WP_001276237.1 | plasmid SOS inhibition protein A | - |
| C6P65_RS26945 () | 100079..100513 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| C6P65_RS26950 () | 100568..102526 | - | 1959 | WP_000117328.1 | ParB/RepB/Spo0J family partition protein | - |
| C6P65_RS26955 () | 102587..102820 | - | 234 | WP_000005993.1 | DUF905 family protein | - |
| C6P65_RS26960 () | 102878..103399 | - | 522 | WP_000290784.1 | single-stranded DNA-binding protein | - |
| C6P65_RS26980 () | 103872..104137 | - | 266 | Protein_112 | hypothetical protein | - |
| C6P65_RS26990 () | 104289..104852 | - | 564 | WP_028985918.1 | class I SAM-dependent methyltransferase | - |
| C6P65_RS26995 () | 104898..106259 | - | 1362 | WP_028985917.1 | DUF3560 domain-containing protein | - |
| C6P65_RS27000 () | 106311..106541 | - | 231 | WP_000155845.1 | hypothetical protein | - |
| C6P65_RS27525 () | 107054..107599 | + | 546 | Protein_116 | hypothetical protein | - |
| C6P65_RS27015 () | 107578..107769 | - | 192 | WP_001027494.1 | hypothetical protein | - |
| C6P65_RS27020 () | 107766..108188 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| C6P65_RS27025 () | 108235..108537 | - | 303 | WP_072148062.1 | antirestriction protein | - |
| C6P65_RS27530 () | 109073..109849 | - | 777 | WP_001005035.1 | hypothetical protein | - |
| C6P65_RS27040 () | 109895..110449 | - | 555 | WP_077248347.1 | DUF1380 family protein | - |
| C6P65_RS27045 () | 110343..110564 | - | 222 | WP_001104870.1 | hypothetical protein | - |
| C6P65_RS27050 () | 110565..111248 | - | 684 | WP_000085939.1 | DNA methylase | - |
| C6P65_RS27055 () | 111325..111630 | - | 306 | WP_010891292.1 | hypothetical protein | - |
| C6P65_RS27535 () | 111634..112535 | - | 902 | Protein_125 | DUF1281 domain-containing protein | - |
| C6P65_RS27070 () | 113187..114158 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| C6P65_RS27075 () | 114158..115324 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| C6P65_RS27080 () | 115912..116667 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| C6P65_RS27085 () | 117419..118225 | - | 807 | Protein_129 | site-specific integrase | - |
| C6P65_RS27090 () | 118226..118531 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C6P65_RS27095 () | 118533..118751 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C6P65_RS27100 () | 119331..120419 | + | 1089 | WP_028985936.1 | transcriptional repressor PifC | - |
| C6P65_RS27105 () | 120421..122646 | + | 2226 | WP_028985935.1 | exclusion suppressor FxsA | - |
| C6P65_RS27110 () | 122696..122914 | - | 219 | Protein_134 | nucleotide-binding protein | - |
| C6P65_RS27115 () | 123004..123429 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| C6P65_RS27120 () | 123426..123776 | + | 351 | WP_000624720.1 | IS66 family transposase ISEc23 | Transposase |
| C6P65_RS27125 () | 123807..125420 | + | 1614 | WP_000080191.1 | IS66 family transposase ISEc23 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|