MGE detailed information
MGE type: Conjugative plasmid MGE length: 131410 bp
Accession: NZ_CP027343 Location: 1..131410 Organism: Escherichia coli strain 2014C-4587 Replicon: plasmid unnamed
Accession: NZ_CP027343 Location: 1..131410 Organism: Escherichia coli strain 2014C-4587 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6N23_RS26105 () | 74..421 | - | 348 | WP_071532380.1 | P-type conjugative transfer protein TrbJ | - |
| C6N23_RS26110 () | 351..896 | - | 546 | WP_001457363.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| C6N23_RS26115 () | 883..1170 | - | 288 | WP_000335420.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| C6N23_RS26120 () | 1236..1682 | - | 447 | WP_077775024.1 | hypothetical protein | - |
| C6N23_RS26125 () | 1768..2007 | - | 240 | WP_000979752.1 | hypothetical protein | - |
| C6N23_RS26130 () | 2146..2889 | - | 744 | WP_001030373.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| C6N23_RS26135 () | 2882..3139 | - | 258 | WP_000864346.1 | conjugal transfer protein TrbE | - |
| C6N23_RS26140 () | 3153..4991 | - | 1839 | WP_096844697.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| C6N23_RS26145 () | 5151..5531 | - | 381 | WP_032206670.1 | hypothetical protein | - |
| C6N23_RS26150 () | 5528..6166 | - | 639 | WP_001035184.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| C6N23_RS26155 () | 6395..6728 | - | 334 | Protein_11 | hypothetical protein | - |
| C6N23_RS26160 () | 6755..6904 | - | 150 | Protein_12 | TraU family protein | - |
| C6N23_RS26165 () | 6908..7285 | - | 378 | WP_001365598.1 | hypothetical protein | - |
| C6N23_RS26175 () | 8081..8623 | - | 543 | WP_001365589.1 | hypothetical protein | - |
| C6N23_RS26180 () | 8637..9629 | - | 993 | WP_000817328.1 | conjugal transfer pilus assembly protein TraU | - |
| C6N23_RS26185 () | 9626..10258 | - | 633 | WP_000877291.1 | type-F conjugative transfer system protein TraW | - |
| C6N23_RS26190 () | 10255..10641 | - | 387 | WP_033817130.1 | type-F conjugative transfer system protein TrbI | - |
| C6N23_RS26195 () | 10638..13265 | - | 2628 | WP_052892069.1 | type IV secretion system protein TraC | - |
| C6N23_RS26200 () | 13425..13646 | - | 222 | WP_001278980.1 | conjugal transfer protein TraR | - |
| C6N23_RS26205 () | 13781..14296 | - | 516 | WP_000809868.1 | type IV conjugative transfer system lipoprotein TraV | - |
| C6N23_RS26210 () | 14293..14544 | - | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| C6N23_RS26215 () | 14537..14905 | - | 369 | WP_071532379.1 | conjugal transfer protein TrbD | - |
| C6N23_RS26220 () | 14844..15431 | - | 588 | WP_000002898.1 | conjugal transfer protein TraP | - |
| C6N23_RS26225 () | 15421..16851 | - | 1431 | WP_000146622.1 | conjugal transfer protein TraB | - |
| C6N23_RS26230 () | 16851..17579 | - | 729 | WP_001365587.1 | type-F conjugative transfer system secretin TraK | - |
| C6N23_RS26235 () | 17566..18132 | - | 567 | WP_000399759.1 | type IV conjugative transfer system protein TraE | - |
| C6N23_RS26240 () | 18154..18465 | - | 312 | WP_000012099.1 | type IV conjugative transfer system protein TraL | - |
| C6N23_RS26245 () | 18480..18833 | - | 354 | WP_021521309.1 | type IV conjugative transfer system pilin TraA | - |
| C6N23_RS26250 () | 18868..19095 | - | 228 | WP_032142519.1 | conjugal transfer relaxosome protein TraY | - |
| C6N23_RS26255 () | 19183..19872 | - | 690 | WP_000332473.1 | PAS domain-containing protein | - |
| C6N23_RS26260 () | 20065..20448 | - | 384 | WP_001151560.1 | relaxosome protein TraM | - |
| C6N23_RS26265 () | 20733..21380 | + | 648 | WP_135301269.1 | hypothetical protein | VF |
| C6N23_RS26270 () | 21676..22497 | - | 822 | WP_052892104.1 | DUF945 domain-containing protein | - |
| C6N23_RS26275 () | 22616..22903 | - | 288 | WP_106914345.1 | hypothetical protein | - |
| C6N23_RS26285 () | 23059..23361 | - | 303 | WP_001272235.1 | hypothetical protein | - |
| C6N23_RS27325 () | 23661..24021 | + | 361 | Protein_36 | hypothetical protein | - |
| C6N23_RS26305 () | 24259..24420 | - | 162 | WP_000775238.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 24486..24679 | - | 194 | NuclAT_0 | - | Antitoxin Detail |
| - () | 24486..24679 | - | 194 | NuclAT_0 | - | Antitoxin Detail |
| - () | 24486..24679 | - | 194 | NuclAT_0 | - | Antitoxin Detail |
| - () | 24486..24679 | - | 194 | NuclAT_0 | - | Antitoxin Detail |
| C6N23_RS26310 () | 24628..24942 | - | 315 | WP_000872086.1 | hypothetical protein | - |
| C6N23_RS26315 () | 24939..25658 | - | 720 | WP_001276237.1 | plasmid SOS inhibition protein A | - |
| C6N23_RS26320 () | 25655..26089 | - | 435 | WP_000845923.1 | conjugation system SOS inhibitor PsiB | - |
| C6N23_RS26325 () | 26144..28102 | - | 1959 | WP_052892092.1 | ParB/RepB/Spo0J family partition protein | - |
| C6N23_RS26330 () | 28163..28396 | - | 234 | WP_000005993.1 | DUF905 family protein | - |
| C6N23_RS26340 () | 28454..28975 | - | 522 | WP_032107538.1 | single-stranded DNA-binding protein | - |
| C6N23_RS27330 () | 29457..29825 | + | 369 | WP_141033683.1 | pilus protein | - |
| C6N23_RS26355 () | 29806..30369 | - | 564 | WP_052892102.1 | class I SAM-dependent methyltransferase | - |
| C6N23_RS26360 () | 30414..31775 | - | 1362 | WP_047091120.1 | DUF3560 domain-containing protein | - |
| C6N23_RS26365 () | 31827..32057 | - | 231 | WP_032209728.1 | hypothetical protein | - |
| C6N23_RS27335 () | 32731..33039 | + | 309 | WP_071830340.1 | pilus assembly protein | - |
| C6N23_RS26380 () | 33018..33209 | - | 192 | WP_001027048.1 | hypothetical protein | - |
| C6N23_RS26385 () | 33209..33628 | - | 420 | WP_000271696.1 | DUF1380 family protein | - |
| C6N23_RS26390 () | 33675..33977 | - | 303 | WP_001364029.1 | antirestriction protein | - |
| C6N23_RS26400 () | 34515..35285 | - | 771 | WP_032305180.1 | hypothetical protein | - |
| C6N23_RS26405 () | 35330..35764 | - | 435 | WP_000274463.1 | DUF1380 family protein | - |
| C6N23_RS26410 () | 35778..35999 | - | 222 | WP_001104895.1 | hypothetical protein | - |
| C6N23_RS26415 () | 36000..36653 | - | 654 | WP_052892101.1 | DNA methylase | - |
| C6N23_RS26420 () | 37233..38933 | + | 1701 | WP_000125552.1 | group II intron reverse transcriptase/maturase | - |
| C6N23_RS26425 () | 39163..39475 | - | 313 | Protein_57 | hypothetical protein | - |
| C6N23_RS26430 () | 39501..40427 | - | 927 | WP_106914347.1 | DUF1281 domain-containing protein | - |
| C6N23_RS26440 () | 40792..41040 | + | 249 | WP_000618108.1 | DinI-like family protein | - |
| C6N23_RS26445 () | 41037..41474 | + | 438 | WP_000109074.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| C6N23_RS26450 () | 41474..42744 | + | 1271 | Protein_61 | translesion error-prone DNA polymerase V subunit UmuC | - |
| C6N23_RS26460 () | 42749..43141 | - | 393 | WP_000340836.1 | plasmid partitioning/stability family protein | - |
| C6N23_RS26465 () | 43146..44117 | - | 972 | WP_001103695.1 | hypothetical protein | - |
| C6N23_RS26470 () | 44346..44990 | + | 645 | WP_000633912.1 | AAA family ATPase | - |
| C6N23_RS26475 () | 44984..45259 | + | 276 | WP_000239527.1 | hypothetical protein | - |
| C6N23_RS26480 () | 45397..46206 | - | 810 | WP_000016958.1 | site-specific integrase | - |
| C6N23_RS26485 () | 46207..46512 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C6N23_RS26490 () | 46514..46732 | - | 219 | WP_000813639.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C6N23_RS26495 () | 47328..47588 | + | 261 | WP_000343084.1 | hypothetical protein | - |
| C6N23_RS26500 () | 47585..48175 | + | 591 | WP_000194564.1 | hypothetical protein | - |
| C6N23_RS27340 () | 48193..48540 | - | 348 | WP_000142428.1 | hypothetical protein | - |
| C6N23_RS26515 () | 48725..49003 | + | 279 | WP_001365566.1 | hypothetical protein | - |
| C6N23_RS26520 () | 49010..49345 | - | 336 | Protein_73 | colicin | - |
| C6N23_RS26525 () | 49440..50171 | - | 732 | WP_000850413.1 | complement resistance protein TraT | - |
| C6N23_RS27345 () | 50405..50621 | - | 217 | Protein_75 | hypothetical protein | - |
| C6N23_RS26545 () | 51184..52161 | + | 978 | WP_050864229.1 | RepB family plasmid replication initiator protein | - |
| C6N23_RS26550 () | 52400..52682 | - | 283 | Protein_77 | ISL3 family transposase ISEc53 | Transposase |
| C6N23_RS26555 () | 52839..53069 | - | 231 | WP_032279745.1 | hypothetical protein | - |
| C6N23_RS26565 () | 53199..53693 | - | 495 | WP_000377256.1 | Transcriptional repressor MprA | VF |
| C6N23_RS26570 () | 53814..55253 | - | 1440 | WP_021293303.1 | Hemolysin secretion protein D, chromosomal | VF |
| C6N23_RS26575 () | 55257..57377 | - | 2121 | WP_072094473.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| C6N23_RS26580 () | 57427..60423 | - | 2997 | WP_000217728.1 | Hemolysin, chromosomal | VF |
| C6N23_RS26585 () | 60425..60940 | - | 516 | WP_001365635.1 | RTX-I toxin-activating lysine-acyltransferase ApxIC | VF |
| C6N23_RS26595 () | 61368..62170 | - | 803 | Protein_84 | Outer membrane protein A | VF |
| C6N23_RS26600 () | 62195..66520 | - | 4326 | WP_000791279.1 | Autotransporter adhesin SadA | VF |
| C6N23_RS26605 () | 66656..66943 | - | 288 | WP_050864264.1 | Major pilu subunit operon regulatory protein PapB | VF |
| C6N23_RS27350 () | 66885..67136 | + | 252 | WP_001365625.1 | hypothetical protein | - |
| C6N23_RS26610 () | 67760..69316 | + | 1557 | WP_050864262.1 | L-lactate permease | - |
| C6N23_RS26615 () | 69366..70085 | + | 720 | WP_001102131.1 | (Fe-S)-binding protein | - |
| C6N23_RS26620 () | 70096..71511 | + | 1416 | WP_000054160.1 | iron-sulfur cluster-binding protein | - |
| C6N23_RS26625 () | 71516..72214 | + | 699 | WP_000431492.1 | lactate utilization protein C | - |
| C6N23_RS26630 () | 72255..72491 | - | 237 | WP_001369996.1 | hypothetical protein | - |
| C6N23_RS26635 () | 72559..73023 | - | 465 | WP_077629759.1 | IS3 family transposase ISKpn8 | Transposase |
| C6N23_RS26640 () | 73139..73450 | - | 312 | WP_000204186.1 | hypothetical protein | - |
| C6N23_RS26645 () | 73478..73669 | - | 192 | WP_000264906.1 | hypothetical protein | - |
| C6N23_RS26650 () | 73679..74044 | - | 366 | WP_000997727.1 | hypothetical protein | - |
| C6N23_RS26660 () | 74178..74387 | + | 210 | WP_062896385.1 | hypothetical protein | - |
| C6N23_RS26665 () | 74550..78452 | - | 3903 | WP_047091594.1 | Serine protease EspP | VF |
| C6N23_RS26670 () | 78949..79335 | - | 387 | WP_000598953.1 | thermonuclease family protein | - |
| C6N23_RS26675 () | 79494..80171 | + | 678 | WP_001158025.1 | hypothetical protein | - |
| C6N23_RS26690 () | 80661..80981 | - | 321 | WP_000220092.1 | hypothetical protein | - |
| C6N23_RS26695 () | 81039..82083 | - | 1045 | Protein_102 | IS3 family transposase IS3 | Transposase |
| C6N23_RS27200 () | 82166..82315 | - | 150 | WP_000539306.1 | hypothetical protein | - |
| C6N23_RS26700 () | 82581..84074 | - | 1494 | WP_135279680.1 | autoagglutinating adhesin Saa | - |
| C6N23_RS27355 () | 84328..84417 | + | 90 | Protein_105 | transposase | - |
| C6N23_RS26705 () | 84484..85529 | + | 1046 | WP_106914348.1 | IS3 family transposase ISEc17 | Transposase |
| C6N23_RS26710 () | 85874..86053 | + | 180 | Protein_107 | integrase core domain-containing protein | - |
| C6N23_RS26720 () | 86361..88447 | + | 2087 | Protein_108 | bifunctional siderophore receptor/adhesin Iha | - |
| C6N23_RS26725 () | 88708..89130 | - | 423 | WP_001212725.1 | Exc2 family lipoprotein | - |
| C6N23_RS26730 () | 89465..89647 | - | 183 | Protein_110 | IS110 family transposase | - |
| C6N23_RS26735 () | 89709..89897 | + | 189 | Protein_111 | IS66 family transposase IS682 | Transposase |
| C6N23_RS26745 () | 90181..90606 | - | 426 | WP_001373081.1 | subtilase AB5 cytotoxin subunit B | - |
| C6N23_RS26750 () | 90623..91666 | - | 1044 | WP_000912970.1 | subtilase AB5 cytotoxin subunit A | - |
| C6N23_RS26755 () | 91720..92684 | - | 965 | Protein_114 | transposase | - |
| C6N23_RS26760 () | 92715..93063 | - | 349 | Protein_115 | IS66 family transposase IS682 | Transposase |
| C6N23_RS26765 () | 93060..93485 | - | 426 | WP_000435654.1 | IS66 family transposase IS682 | Transposase |
| C6N23_RS26775 () | 93790..93975 | - | 186 | WP_071531845.1 | hypothetical protein | - |
| C6N23_RS26780 () | 93975..95273 | - | 1299 | Protein_118 | VENN motif pre-toxin domain-containing protein | - |
| C6N23_RS26785 () | 95529..95702 | + | 174 | Protein_119 | Tn3 family transposase | - |
| C6N23_RS26790 () | 95899..96894 | + | 996 | Protein_120 | IS110 family transposase IS4321R | Transposase |
| C6N23_RS26795 () | 97313..97501 | - | 189 | WP_169301900.1 | hypothetical protein | - |
| C6N23_RS26800 () | 97494..98110 | - | 617 | Protein_122 | tRNA nuclease CdiA | VF |
| C6N23_RS26805 () | 98120..106933 | - | 8814 | Protein_123 | tRNA nuclease CdiA | VF |
| C6N23_RS26810 () | 106946..108712 | - | 1767 | WP_052892072.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| C6N23_RS26820 () | 109327..109566 | - | 240 | WP_001365702.1 | MarR family transcriptional regulator | - |
| C6N23_RS26825 () | 109579..109839 | - | 261 | WP_072122678.1 | hypothetical protein | - |
| C6N23_RS26840 () | 110542..111399 | - | 858 | WP_000130991.1 | incFII family plasmid replication initiator RepA | - |
| C6N23_RS26845 () | 111392..111466 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| C6N23_RS26855 () | 111701..111958 | - | 258 | WP_000084404.1 | replication regulatory protein RepA | - |
| C6N23_RS26860 () | 112242..112391 | - | 150 | WP_001336447.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 112439..112495 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 112439..112495 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 112439..112495 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 112439..112495 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| C6N23_RS26870 () | 112670..113053 | - | 384 | WP_001109065.1 | hypothetical protein | - |
| C6N23_RS26875 () | 113156..113617 | - | 462 | WP_052892071.1 | thermonuclease family protein | - |
| C6N23_RS26885 () | 114716..115273 | - | 558 | WP_000139380.1 | fertility inhibition protein FinO | - |
| C6N23_RS26890 () | 115309..115677 | - | 369 | WP_000722534.1 | NirD/YgiW/YdeI family stress tolerance protein | - |
| C6N23_RS26895 () | 115760..116506 | - | 747 | WP_000205708.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| C6N23_RS26900 () | 116526..121796 | - | 5271 | WP_033817123.1 | Multifunctional conjugation protein TraI | Relaxase |
| C6N23_RS26905 () | 121878..122105 | + | 228 | WP_000450527.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| C6N23_RS26910 () | 122105..122503 | + | 399 | WP_000911320.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| C6N23_RS26915 () | 122512..124701 | - | 2190 | WP_096844695.1 | type IV conjugative transfer system coupling protein TraD | - |
| C6N23_RS26920 () | 124758..125489 | - | 732 | WP_000199918.1 | hypothetical protein | - |
| C6N23_RS26925 () | 125665..126453 | - | 789 | WP_033817126.1 | hypothetical protein | - |
| C6N23_RS26930 () | 126621..126932 | + | 312 | WP_000522220.1 | heavy metal-binding domain-containing protein | - |
| C6N23_RS26935 () | 126935..129754 | - | 2820 | WP_033817127.1 | conjugal transfer mating pair stabilization protein TraG | - |
| C6N23_RS26940 () | 129751..131124 | - | 1374 | WP_000944332.1 | conjugal transfer protein TraH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|