MGE detailed information
MGE type: Genomic_island MGE length: 57192 bp
Accession: NZ_CP027140 Location: 1072495..1129686 Organism: Escherichia coli strain AR_0369 Replicon: chromosome
Accession: NZ_CP027140 Location: 1072495..1129686 Organism: Escherichia coli strain AR_0369 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC06_RS07645 () | 1068404..1069786 | - | 1383 | Protein_1030 | bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase | - |
| CSC06_RS07650 () | 1069789..1070694 | + | 906 | Protein_1031 | IS3-like element ISEc52 family transposase | - |
| CSC06_RS07655 () | 1070592..1071890 | - | 1299 | WP_032177827.1 | IS256 family transposase | - |
| CSC06_RS07665 () | 1072108..1072272 | - | 165 | Protein_1033 | transposase domain-containing protein | - |
| CSC06_RS26420 () | 1072217..1072480 | - | 264 | WP_001247777.1 | transposase | - |
| CSC06_RS26425 () | 1072495..1072758 | + | 264 | WP_001295708.1 | hypothetical protein | - |
| CSC06_RS07675 () | 1073001..1073282 | + | 282 | WP_000643630.1 | helix-turn-helix domain-containing protein | - |
| CSC06_RS07680 () | 1073317..1073886 | + | 570 | WP_032177826.1 | small heat shock protein sHSP20 | - |
| CSC06_RS07685 () | 1073992..1076841 | + | 2850 | WP_000101613.1 | heat shock survival AAA family ATPase ClpK | - |
| CSC06_RS07690 () | 1076841..1077032 | + | 192 | WP_001295707.1 | hypothetical protein | - |
| CSC06_RS07695 () | 1077093..1078820 | + | 1728 | WP_105394183.1 | FtsH/Yme1/Tma family ATP-dependent metallopeptidase | - |
| CSC06_RS07700 () | 1078908..1079366 | + | 459 | WP_001275373.1 | small heat shock protein sHSP20-GI | - |
| CSC06_RS07705 () | 1079389..1080303 | + | 915 | WP_001022486.1 | heat resistance protein YfdX1 | - |
| CSC06_RS07710 () | 1080406..1081293 | + | 888 | WP_032177823.1 | heat resistance protein YfdX2 | - |
| CSC06_RS07715 () | 1081383..1081994 | + | 612 | WP_001090779.1 | heat resistance membrane protein HdeD-GI | - |
| CSC06_RS07720 () | 1082074..1083219 | + | 1146 | WP_032200811.1 | hypothetical protein | - |
| CSC06_RS07725 () | 1083209..1083649 | + | 441 | WP_000786816.1 | heat resistance system thioredoxin Trx-GI | - |
| CSC06_RS07730 () | 1083653..1085368 | + | 1716 | WP_032177822.1 | heat resistance system K+/H+ antiporter KefB-GI | - |
| CSC06_RS07735 () | 1085365..1085862 | + | 498 | WP_000843382.1 | heat resistance protein PsiE-GI | - |
| CSC06_RS07740 () | 1085840..1086528 | + | 689 | Protein_1049 | Zn-dependent protease | - |
| CSC06_RS07745 () | 1086553..1087704 | + | 1152 | WP_000323729.1 | trypsin-like peptidase domain-containing protein | - |
| CSC06_RS07750 () | 1087929..1088498 | - | 570 | Protein_1051 | IS5 family transposase | - |
| CSC06_RS07755 () | 1088494..1089188 | - | 695 | Protein_1052 | WYL domain-containing protein | - |
| CSC06_RS07760 () | 1089620..1090483 | + | 864 | WP_032200809.1 | GTPase family protein | - |
| CSC06_RS07765 () | 1090575..1091396 | + | 822 | WP_032200808.1 | DUF945 domain-containing protein | - |
| CSC06_RS07770 () | 1091613..1092314 | + | 702 | WP_001581462.1 | WYL domain-containing protein | - |
| CSC06_RS07775 () | 1092355..1092591 | + | 237 | WP_001144031.1 | hypothetical protein | - |
| CSC06_RS07780 () | 1092591..1093034 | + | 444 | WP_032199444.1 | hypothetical protein | - |
| CSC06_RS07785 () | 1093057..1093524 | + | 468 | WP_032200803.1 | hypothetical protein | - |
| CSC06_RS07790 () | 1093601..1093840 | + | 240 | WP_000194654.1 | DUF905 domain-containing protein | - |
| CSC06_RS07795 () | 1093938..1094396 | + | 459 | WP_032177818.1 | antirestriction protein | - |
| CSC06_RS07800 () | 1094412..1094888 | + | 477 | WP_000811693.1 | RadC family protein | - |
| CSC06_RS07805 () | 1094897..1095118 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| CSC06_RS07810 () | 1095137..1095454 | + | 318 | WP_000070396.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| CSC06_RS07815 () | 1095475..1095816 | + | 342 | WP_000854680.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| CSC06_RS07825 () | 1096388..1097641 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| CSC06_RS07830 () | 1097653..1098756 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| CSC06_RS07835 () | 1099044..1100099 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| CSC06_RS07840 () | 1100138..1100539 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| CSC06_RS07845 () | 1100597..1101841 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 1101257..1101337 | - | 81 | NuclAT_11 | - | - |
| - () | 1101257..1101337 | - | 81 | NuclAT_11 | - | - |
| - () | 1101257..1101337 | - | 81 | NuclAT_11 | - | - |
| - () | 1101257..1101337 | - | 81 | NuclAT_11 | - | - |
| CSC06_RS07850 () | 1101933..1102391 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| CSC06_RS07855 () | 1102652..1104109 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| CSC06_RS07860 () | 1104166..1104687 | - | 522 | Protein_1072 | peptide chain release factor H | - |
| CSC06_RS07865 () | 1104686..1104889 | - | 204 | Protein_1073 | RNA ligase RtcB family protein | - |
| CSC06_RS07870 () | 1105135..1105587 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| CSC06_RS07875 () | 1105597..1105995 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| CSC06_RS07880 () | 1105998..1106291 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| CSC06_RS07885 () | 1106343..1107398 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| CSC06_RS07890 () | 1107469..1108254 | - | 786 | WP_000207587.1 | putative lateral flagellar export/assembly protein LafU | - |
| CSC06_RS07895 () | 1108226..1109938 | + | 1713 | Protein_1079 | flagellar biosynthesis protein FlhA | - |
| CSC06_RS07900 () | 1110154..1110651 | - | 498 | WP_000006261.1 | REP-associated tyrosine transposase RayT | - |
| CSC06_RS07905 () | 1110827..1111600 | - | 774 | WP_123907333.1 | C40 family peptidase | - |
| CSC06_RS07910 () | 1111786..1112046 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| CSC06_RS07915 () | 1112049..1112327 | + | 279 | WP_000615979.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| CSC06_RS07920 () | 1112483..1113223 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| CSC06_RS07925 () | 1113194..1113961 | - | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| CSC06_RS07930 () | 1114167..1114745 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
| CSC06_RS07935 () | 1114985..1117429 | + | 2445 | WP_000973083.1 | acyl-CoA dehydrogenase FadE | - |
| CSC06_RS07940 () | 1117472..1117918 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| CSC06_RS07945 () | 1118099..1118869 | + | 771 | WP_001118040.1 | 2-oxoglutaramate amidase | - |
| CSC06_RS07950 () | 1118920..1119294 | - | 375 | Protein_1090 | ISAs1 family transposase | - |
| CSC06_RS26430 () | 1119473..1119649 | - | 177 | WP_000008098.1 | hypothetical protein | - |
| CSC06_RS07955 () | 1119646..1119864 | - | 219 | WP_001101836.1 | hypothetical protein | - |
| CSC06_RS07960 () | 1119842..1121251 | - | 1410 | Protein_1093 | RHS domain-containing protein | - |
| CSC06_RS07965 () | 1121251..1122138 | + | 888 | Protein_1094 | type VI secretion system baseplate subunit TssE | - |
| CSC06_RS07970 () | 1122149..1123501 | + | 1353 | WP_001087741.1 | type VI secretion system ImpA and VasL domain-containing protein | - |
| CSC06_RS07975 () | 1123525..1124007 | + | 483 | WP_105394186.1 | Hcp family type VI secretion system effector | - |
| CSC06_RS07980 () | 1124051..1124965 | + | 915 | WP_000908052.1 | hypothetical protein | - |
| CSC06_RS07985 () | 1124975..1125454 | + | 480 | WP_001236645.1 | hypothetical protein | - |
| CSC06_RS07990 () | 1125591..1126376 | - | 786 | WP_001053630.1 | hypothetical protein | - |
| CSC06_RS08005 () | 1126915..1127646 | - | 732 | WP_001300756.1 | DNA polymerase III subunit epsilon | - |
| CSC06_RS08010 () | 1127711..1128178 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| CSC06_RS08015 () | 1128175..1128897 | - | 723 | WP_001297210.1 | class I SAM-dependent methyltransferase | - |
| CSC06_RS08020 () | 1128931..1129686 | + | 756 | WP_001052717.1 | hydroxyacylglutathione hydrolase | - |
| CSC06_RS08025 () | 1129758..1131116 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| CSC06_RS08030 () | 1131164..1131760 | - | 597 | Protein_1105 | methyltransferase domain-containing protein | - |
| CSC06_RS08035 () | 1131791..1132591 | - | 801 | WP_105394187.1 | endonuclease/exonuclease/phosphatase family protein | - |
| CSC06_RS08040 () | 1132832..1133746 | + | 915 | WP_000648577.1 | LysR family transcriptional regulator | - |
| CSC06_RS08045 () | 1133743..1134546 | - | 804 | WP_000997033.1 | 2,5-didehydrogluconate reductase DkgB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|