MGE detailed information
MGE type: Conjugative plasmid MGE length: 98987 bp
Accession: NZ_CP027127 Location: 1..98987 Organism: Escherichia coli strain AR_0374 Replicon: plasmid unnamed2
Accession: NZ_CP027127 Location: 1..98987 Organism: Escherichia coli strain AR_0374 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC11_RS25340 () | 83..418 | + | 336 | WP_000157086.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| CSC11_RS25345 () | 504..1352 | - | 849 | WP_001077027.1 | DUF4942 domain-containing protein | - |
| CSC11_RS26670 () | 1701..1898 | + | 198 | WP_001161115.1 | hypothetical protein | - |
| CSC11_RS25360 () | 1932..2183 | + | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| CSC11_RS25365 () | 2214..2459 | - | 246 | WP_001260884.1 | hypothetical protein | - |
| CSC11_RS25370 () | 2459..3349 | - | 891 | WP_000038332.1 | Recombination-promoting nuclease RpnA | VF |
| CSC11_RS25375 () | 3414..3680 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| CSC11_RS25380 () | 3774..4208 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| CSC11_RS25395 () | 4937..5437 | - | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| CSC11_RS25405 () | 5884..7059 | - | 1176 | WP_000942657.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| CSC11_RS25410 () | 7189..7908 | - | 720 | WP_001276260.1 | plasmid SOS inhibition protein A | - |
| CSC11_RS25415 () | 7905..8339 | - | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| CSC11_RS25420 () | 8394..10352 | - | 1959 | WP_001145458.1 | ParB/RepB/Spo0J family partition protein | - |
| CSC11_RS25425 () | 10411..10644 | - | 234 | WP_000006012.1 | DUF905 family protein | - |
| CSC11_RS25430 () | 10702..11229 | - | 528 | WP_001276116.1 | single-stranded DNA-binding protein | - |
| CSC11_RS26675 () | 11598..11666 | + | 69 | Protein_15 | pilus protein | - |
| CSC11_RS25440 () | 11999..12190 | - | 192 | WP_001027500.1 | hypothetical protein | - |
| CSC11_RS25445 () | 12187..12609 | - | 423 | WP_000271725.1 | DUF1380 family protein | - |
| CSC11_RS25450 () | 12656..12958 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| CSC11_RS26350 () | 13499..14269 | - | 771 | WP_024133193.1 | hypothetical protein | - |
| CSC11_RS25465 () | 14320..14754 | - | 435 | WP_000274403.1 | DUF1380 family protein | - |
| CSC11_RS25470 () | 14766..14987 | - | 222 | WP_001104887.1 | hypothetical protein | - |
| CSC11_RS25475 () | 14988..15671 | - | 684 | WP_000086178.1 | DNA methylase | - |
| CSC11_RS25480 () | 15748..16059 | - | 312 | WP_010891263.1 | hypothetical protein | - |
| CSC11_RS25485 () | 16056..16958 | - | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| CSC11_RS25495 () | 17376..17624 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| CSC11_RS25500 () | 17621..18058 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CSC11_RS25505 () | 18058..19332 | + | 1275 | WP_000457493.1 | Y-family DNA polymerase | - |
| CSC11_RS25510 () | 19334..19750 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| CSC11_RS25515 () | 19743..20723 | - | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| CSC11_RS25520 () | 21137..21445 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| CSC11_RS25525 () | 21532..22176 | - | 645 | WP_001144036.1 | ParA family protein | - |
| CSC11_RS25530 () | 22356..23162 | - | 807 | WP_000016969.1 | site-specific integrase | - |
| CSC11_RS25535 () | 23163..23468 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| CSC11_RS25540 () | 23470..23688 | - | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| CSC11_RS25550 () | 24246..25172 | + | 927 | WP_001290416.1 | hypothetical protein | - |
| CSC11_RS25555 () | 25217..25471 | + | 255 | WP_000678527.1 | hypothetical protein | - |
| CSC11_RS25560 () | 25970..26314 | + | 345 | WP_000793307.1 | hypothetical protein | - |
| CSC11_RS25565 () | 26490..27491 | - | 1002 | WP_000774875.1 | DUF4238 domain-containing protein | - |
| CSC11_RS25570 () | 27843..28097 | + | 255 | WP_000343103.1 | hypothetical protein | - |
| CSC11_RS25575 () | 28097..28687 | + | 591 | WP_000194550.1 | hypothetical protein | - |
| CSC11_RS25580 () | 28705..29052 | - | 348 | WP_000142436.1 | hypothetical protein | - |
| CSC11_RS25585 () | 29171..29518 | + | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| CSC11_RS25590 () | 29536..31416 | - | 1881 | WP_001283341.1 | colicin 1B | - |
| CSC11_RS25595 () | 31695..32165 | - | 471 | Protein_44 | hypothetical protein | - |
| CSC11_RS25600 () | 32217..32534 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| CSC11_RS25605 () | 32531..33064 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| CSC11_RS25610 () | 33158..34303 | - | 1146 | WP_000976514.1 | Beta-lactamase | ARG |
| CSC11_RS25620 () | 34712..35409 | + | 698 | Protein_48 | IS1 family transposase | - |
| CSC11_RS25625 () | 35425..36666 | - | 1242 | Protein_49 | IS1380 family transposase ISEcp1 | Transposase |
| CSC11_RS25630 () | 36849..37733 | - | 885 | Protein_50 | hypothetical protein | - |
| CSC11_RS25640 () | 38087..38689 | + | 603 | WP_000517695.1 | hypothetical protein | - |
| CSC11_RS25645 () | 38745..39239 | + | 495 | WP_001459505.1 | hypothetical protein | - |
| CSC11_RS26680 () | 39239..39505 | + | 267 | WP_000955263.1 | hypothetical protein | - |
| CSC11_RS25660 () | 39982..40455 | - | 474 | WP_001334658.1 | hypothetical protein | - |
| CSC11_RS25665 () | 40572..41420 | - | 849 | WP_001057991.1 | 3'-5' exonuclease | - |
| CSC11_RS25670 () | 41460..41741 | - | 282 | WP_000970007.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CSC11_RS25675 () | 41738..42007 | - | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| CSC11_RS26540 () | 42062..42220 | - | 159 | WP_000841008.1 | hypothetical protein | - |
| CSC11_RS25690 () | 42916..43947 | - | 1032 | WP_000907873.1 | replication initiation protein | - |
| CSC11_RS25705 () | 44920..45183 | + | 264 | WP_001324596.1 | ash family protein | - |
| CSC11_RS25710 () | 45101..45388 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| CSC11_RS25725 () | 45996..46649 | + | 654 | WP_106087059.1 | conjugal transfer protein TraC | - |
| CSC11_RS25730 () | 46663..47229 | + | 567 | WP_000776428.1 | hypothetical protein | - |
| CSC11_RS25735 () | 47497..47751 | + | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| CSC11_RS25740 () | 47794..48246 | + | 453 | WP_000008892.1 | hypothetical protein | - |
| CSC11_RS25750 () | 48920..49987 | + | 1068 | WP_000742600.1 | hypothetical protein | VF |
| CSC11_RS25755 () | 49987..50424 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
| CSC11_RS25760 () | 50438..52120 | + | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| CSC11_RS25765 () | 52113..53408 | + | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| CSC11_RS25770 () | 53395..53847 | + | 453 | WP_001247336.1 | hypothetical protein | VF |
| CSC11_RS25775 () | 53858..55411 | + | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| CSC11_RS25780 () | 55424..56521 | + | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| CSC11_RS25785 () | 56539..57153 | + | 615 | WP_000959785.1 | hypothetical protein | VF |
| CSC11_RS25790 () | 57163..57723 | + | 561 | WP_000014116.1 | hypothetical protein | VF |
| CSC11_RS25795 () | 57708..58364 | + | 657 | WP_001193553.1 | hypothetical protein | VF |
| CSC11_RS25800 () | 58364..59788 | + | 1425 | WP_106087060.1 | hypothetical protein | VF |
| CSC11_RS26685 () | 59785..59982 | - | 198 | WP_032159596.1 | hypothetical protein | - |
| CSC11_RS25820 () | 60592..61746 | + | 1155 | WP_001139958.1 | integrase | - |
| CSC11_RS25825 () | 61897..62721 | + | 825 | WP_001238927.1 | hypothetical protein | - |
| CSC11_RS25830 () | 62807..64009 | + | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| CSC11_RS25835 () | 64069..64653 | + | 585 | WP_000977517.1 | histidine phosphatase family protein | - |
| CSC11_RS25840 () | 65048..65506 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| CSC11_RS25845 () | 65503..66321 | + | 819 | WP_000646097.1 | hypothetical protein | VF |
| CSC11_RS25850 () | 66318..67466 | + | 1149 | WP_001024972.1 | putative protein YggR | VF |
| CSC11_RS25855 () | 67463..67753 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| CSC11_RS25860 () | 67768..68319 | + | 552 | WP_000014584.1 | Phospholipase D | VF |
| CSC11_RS25865 () | 68409..72176 | + | 3768 | WP_001141535.1 | hypothetical protein | - |
| CSC11_RS25870 () | 72194..72541 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| CSC11_RS25875 () | 72538..73230 | + | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| CSC11_RS25880 () | 73241..74224 | + | 984 | WP_001191878.1 | hypothetical protein | VF |
| CSC11_RS25885 () | 74227..75516 | + | 1290 | WP_001271997.1 | conjugal transfer protein TraO | - |
| CSC11_RS25890 () | 75516..76220 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| CSC11_RS25895 () | 76220..76747 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| CSC11_RS25900 () | 76798..77202 | + | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| CSC11_RS25905 () | 77266..77454 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| CSC11_RS25910 () | 77438..78238 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| CSC11_RS25915 () | 78328..81372 | + | 3045 | WP_001024751.1 | IncI1-type conjugal transfer protein TraU | - |
| CSC11_RS25920 () | 81372..81986 | + | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| CSC11_RS25925 () | 81953..83155 | + | 1203 | WP_001189158.1 | IncI1-type conjugal transfer protein TraW | - |
| CSC11_RS25930 () | 83184..83768 | + | 585 | WP_001037998.1 | conjugal transfer protein TraX | - |
| CSC11_RS25935 () | 83865..86033 | + | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| CSC11_RS25940 () | 86104..86766 | + | 663 | WP_000644794.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| CSC11_RS25945 () | 86838..87047 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| CSC11_RS26545 () | 87439..87615 | + | 177 | WP_001054900.1 | hypothetical protein | - |
| - () | 88101..88152 | + | 52 | NuclAT_1 | - | - |
| - () | 88101..88152 | + | 52 | NuclAT_1 | - | - |
| - () | 88101..88152 | + | 52 | NuclAT_1 | - | - |
| - () | 88101..88152 | + | 52 | NuclAT_1 | - | - |
| CSC11_RS25960 () | 88336..89358 | + | 1023 | WP_001572805.1 | IS21 family transposase IS100kyp | Transposase |
| CSC11_RS25965 () | 89355..90137 | + | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| CSC11_RS25970 () | 90498..90749 | + | 252 | WP_001291965.1 | hypothetical protein | - |
| CSC11_RS25975 () | 90821..90973 | - | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| - () | 91023..91085 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 91023..91085 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 91023..91085 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 91023..91085 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| CSC11_RS25980 () | 91265..92473 | + | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| CSC11_RS25985 () | 92492..93562 | + | 1071 | WP_000151575.1 | IncI1-type conjugal transfer protein TrbB | - |
| CSC11_RS25990 () | 93555..95846 | + | 2292 | WP_001289271.1 | hypothetical protein | - |
| CSC11_RS25995 () | 95883..98582 | - | 2700 | WP_001474686.1 | Protein TraI | Relaxase |
| CSC11_RS26000 () | 98593..98925 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|