MGE detailed information
MGE type: Conjugative plasmid MGE length: 106432 bp
Accession: NZ_CP027106 Location: 1..106432 Organism: Escherichia coli strain RM14721 Replicon: plasmid pRM14721
Accession: NZ_CP027106 Location: 1..106432 Organism: Escherichia coli strain RM14721 Replicon: plasmid pRM14721
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5097_RS24310 () | 988..1227 | + | 240 | Protein_1 | IS21 family transposase ISEc12 | Transposase |
| C5097_RS24315 () | 1269..1742 | - | 474 | Protein_2 | IS3 family transposase IS629 | Transposase |
| C5097_RS24320 () | 1832..3340 | - | 1509 | WP_001189123.1 | group II intron reverse transcriptase/maturase | - |
| C5097_RS24330 () | 4013..4752 | - | 740 | Protein_4 | IS3 family transposase IS629 | Transposase |
| C5097_RS24335 () | 4821..5006 | + | 186 | WP_106668556.1 | hypothetical protein | - |
| C5097_RS24340 () | 5445..9356 | + | 3912 | WP_106668519.1 | Outer membrane protein IcsA autotransporter | VF |
| C5097_RS24345 () | 9452..9823 | + | 372 | WP_106668520.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| C5097_RS24350 () | 10039..10809 | + | 771 | WP_106668521.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| C5097_RS24360 () | 11351..11767 | + | 417 | WP_199796834.1 | IS66 family transposase ISEc8 | Transposase |
| C5097_RS24365 () | 11834..12856 | + | 1023 | WP_069916572.1 | IS21 family transposase IS100kyp | Transposase |
| C5097_RS24370 () | 12853..13635 | + | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| C5097_RS24375 () | 13708..14055 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| C5097_RS24380 () | 14105..15643 | + | 1539 | WP_106668522.1 | IS66 family transposase ISEc8 | Transposase |
| C5097_RS24385 () | 15682..16338 | + | 657 | Protein_14 | IS3 family transposase ISEhe3 | Transposase |
| C5097_RS24390 () | 16359..16568 | + | 210 | Protein_15 | IS1 family transposase IS1X2 | Transposase |
| C5097_RS24395 () | 16989..17810 | - | 822 | WP_106668523.1 | Leader peptidase PppA | VF |
| C5097_RS24400 () | 17813..18859 | - | 1047 | WP_106668524.1 | colonization factor CofJ | - |
| C5097_RS24405 () | 18873..19898 | - | 1026 | WP_106668525.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| C5097_RS24410 () | 19882..21216 | - | 1335 | WP_106668558.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| C5097_RS24415 () | 21414..21899 | - | 486 | WP_106668526.1 | type 4b pilus CFA/III biogenesis protein CofG | - |
| C5097_RS24420 () | 21887..22714 | - | 828 | WP_059259589.1 | type 4b pilus CFA/III biogenesis protein CofF | - |
| C5097_RS25240 () | 22716..23276 | - | 561 | WP_032220572.1 | type 4b pilus CFA/III biogenesis protein CofE | - |
| C5097_RS24430 () | 23278..24735 | - | 1458 | WP_106668527.1 | type 4b pilus CFA/III secretin CofD | - |
| C5097_RS24435 () | 24753..25166 | - | 414 | WP_059259582.1 | type 4b pilus CFA/III biogenesis protein CofC | - |
| C5097_RS24440 () | 25183..26754 | - | 1572 | WP_106668528.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| C5097_RS24445 () | 26822..27535 | - | 714 | WP_158701379.1 | Toxin coregulated pilin | VF |
| C5097_RS24450 () | 27836..28279 | - | 444 | WP_001407527.1 | hypothetical protein | VF |
| C5097_RS24455 () | 28292..29143 | - | 852 | WP_106668560.1 | type 4b pilus CFA/III transcriptional regulator CofS | - |
| C5097_RS24460 () | 29436..29738 | - | 303 | WP_059259578.1 | Major pilu subunit operon regulatory protein PapB | VF |
| C5097_RS24465 () | 30316..31013 | - | 698 | Protein_30 | IS1 family transposase IS1G | Transposase |
| C5097_RS24475 () | 31055..32089 | + | 1035 | WP_158701380.1 | hypothetical protein | - |
| C5097_RS25245 () | 32160..32390 | + | 231 | WP_158701381.1 | IS256 family transposase IS1414 | Transposase |
| C5097_RS24485 () | 32362..33108 | - | 747 | Protein_33 | IS3 family transposase IS629 | Transposase |
| C5097_RS24490 () | 33179..35158 | + | 1980 | WP_106668530.1 | PhoX family phosphatase | - |
| C5097_RS24495 () | 35433..36776 | - | 1344 | WP_001316853.1 | esterase-like activity of phytase family protein | - |
| C5097_RS24500 () | 36939..37474 | + | 536 | Protein_36 | IS1 family transposase IS1X2 | Transposase |
| C5097_RS24505 () | 37707..37874 | + | 168 | WP_106668531.1 | transcriptional regulator | - |
| C5097_RS24510 () | 37995..38735 | + | 741 | WP_001066925.1 | IS91 family transposase ISMno23 | Transposase |
| C5097_RS24515 () | 38978..39955 | - | 978 | WP_106668532.1 | RepB family plasmid replication initiator protein | - |
| C5097_RS24525 () | 40733..41323 | - | 591 | WP_106668533.1 | hypothetical protein | - |
| C5097_RS24530 () | 41323..41586 | - | 264 | WP_106668534.1 | hypothetical protein | - |
| C5097_RS24540 () | 42174..42392 | + | 219 | WP_000813631.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C5097_RS24545 () | 42394..42699 | + | 306 | WP_001159861.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C5097_RS24550 () | 42700..43254 | + | 555 | Protein_44 | tyrosine-type recombinase/integrase | - |
| C5097_RS24555 () | 43263..44168 | - | 906 | Protein_45 | IS3 family transposase | - |
| C5097_RS24560 () | 44233..45383 | + | 1151 | Protein_46 | IS30 family transposase | - |
| C5097_RS24565 () | 45390..46286 | + | 897 | Protein_47 | IS3 family transposase ISSd1 | Transposase |
| C5097_RS24575 () | 46331..46498 | - | 168 | Protein_48 | IS3 family transposase IS911 | Transposase |
| C5097_RS24585 () | 47117..48283 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| C5097_RS24590 () | 48283..49254 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| C5097_RS24600 () | 50078..50978 | + | 901 | Protein_51 | DUF1281 domain-containing protein | - |
| C5097_RS24605 () | 50982..51287 | + | 306 | WP_106668537.1 | hypothetical protein | - |
| C5097_RS24610 () | 51516..53216 | - | 1701 | WP_106668538.1 | group II intron reverse transcriptase/maturase | - |
| C5097_RS24615 () | 53796..54449 | + | 654 | WP_106668539.1 | DNA methylase | - |
| C5097_RS24620 () | 54450..54671 | + | 222 | WP_001104893.1 | hypothetical protein | - |
| C5097_RS24625 () | 54685..55119 | + | 435 | WP_106668540.1 | DUF1380 family protein | - |
| C5097_RS24630 () | 55164..55934 | + | 771 | WP_106668541.1 | hypothetical protein | - |
| C5097_RS24635 () | 56124..57236 | - | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| C5097_RS24645 () | 57588..57890 | + | 303 | WP_077693994.1 | antirestriction protein | - |
| C5097_RS24650 () | 57937..58359 | + | 423 | WP_001599376.1 | DUF1380 family protein | - |
| C5097_RS25375 () | 58356..58547 | + | 192 | WP_106668543.1 | hypothetical protein | - |
| C5097_RS24675 () | 59520..59753 | + | 234 | WP_106668544.1 | hypothetical protein | - |
| C5097_RS24680 () | 59849..61021 | + | 1173 | WP_106668445.1 | IS21 family transposase IS21 | Transposase |
| C5097_RS24685 () | 61021..61818 | + | 798 | WP_123001400.1 | IS21 family transposase IS21 | Transposase |
| C5097_RS24690 () | 61937..63298 | + | 1362 | WP_106668545.1 | DUF3560 domain-containing protein | - |
| C5097_RS24695 () | 63346..63609 | + | 264 | Protein_66 | class I SAM-dependent methyltransferase | - |
| C5097_RS24700 () | 63644..64348 | + | 705 | WP_199796835.1 | chromosome partitioning protein ParB | - |
| C5097_RS24705 () | 64403..64837 | + | 435 | WP_096115306.1 | conjugation system SOS inhibitor PsiB | - |
| C5097_RS24710 () | 64834..65553 | + | 720 | WP_106668546.1 | plasmid SOS inhibition protein A | - |
| C5097_RS25255 () | 65565..65753 | - | 189 | WP_032189914.1 | hypothetical protein | - |
| - () | 65565..65789 | + | 225 | NuclAT_0 | - | - |
| - () | 65565..65789 | + | 225 | NuclAT_0 | - | - |
| - () | 65565..65789 | + | 225 | NuclAT_0 | - | - |
| - () | 65565..65789 | + | 225 | NuclAT_0 | - | - |
| C5097_RS24715 () | 65833..65991 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| C5097_RS25380 () | 66226..66405 | - | 180 | Protein_72 | pilus assembly protein | - |
| C5097_RS25385 () | 66654..66845 | + | 192 | Protein_73 | single-stranded DNA-binding protein | - |
| C5097_RS24740 () | 67008..68012 | - | 1005 | WP_024186362.1 | IS110 family transposase IS1663 | Transposase |
| C5097_RS24750 () | 68404..69423 | + | 1020 | WP_053901803.1 | IS110 family transposase ISEc66 | Transposase |
| C5097_RS24760 () | 69720..70217 | + | 498 | Protein_76 | DUF932 domain-containing protein | - |
| C5097_RS24765 () | 70533..71018 | - | 486 | WP_106668548.1 | hypothetical protein | VF |
| C5097_RS24770 () | 71488..71874 | + | 387 | WP_001137413.1 | relaxosome protein TraM | - |
| C5097_RS24775 () | 72356..72637 | + | 282 | WP_000974581.1 | hypothetical protein | - |
| C5097_RS25260 () | 72853..73020 | + | 168 | WP_157187929.1 | hypothetical protein | - |
| C5097_RS24780 () | 73118..73477 | + | 360 | WP_001054135.1 | type IV conjugative transfer system pilin TraA | - |
| C5097_RS24785 () | 73479..73784 | + | 306 | WP_000016323.1 | type IV conjugative transfer system protein TraL | - |
| C5097_RS24790 () | 73804..74367 | + | 564 | WP_000406018.1 | type IV conjugative transfer system protein TraE | - |
| C5097_RS24795 () | 74357..75097 | + | 741 | WP_106668549.1 | type-F conjugative transfer system secretin TraK | - |
| C5097_RS24800 () | 75084..76448 | + | 1365 | Protein_85 | F-type conjugal transfer pilus assembly protein TraB | - |
| C5097_RS24805 () | 76560..76751 | + | 192 | Protein_86 | TraR/DksA C4-type zinc finger protein | - |
| C5097_RS24810 () | 76720..77208 | + | 489 | WP_106668562.1 | conjugal transfer protein TraC | - |
| C5097_RS24815 () | 77205..77669 | + | 465 | WP_000206177.1 | type-F conjugative transfer system protein TrbI | - |
| C5097_RS24820 () | 77669..78304 | + | 636 | WP_000286241.1 | type-F conjugative transfer system protein TraW | - |
| C5097_RS24825 () | 78301..79287 | + | 987 | WP_001083236.1 | conjugal transfer pilus assembly protein TraU | - |
| C5097_RS24830 () | 79298..79666 | + | 369 | WP_000961329.1 | hypothetical protein | - |
| C5097_RS24835 () | 79663..80277 | + | 615 | WP_000832605.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| C5097_RS24840 () | 80274..82103 | + | 1830 | WP_106668550.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| C5097_RS24845 () | 82100..82879 | + | 780 | WP_001398574.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| C5097_RS24850 () | 82903..83505 | + | 603 | WP_000906493.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| C5097_RS24855 () | 83511..84392 | + | 882 | Protein_96 | conjugal transfer protein TraH | - |
| C5097_RS24860 () | 84479..84904 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| C5097_RS24865 () | 84901..85251 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| C5097_RS24870 () | 85282..86895 | + | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| C5097_RS24875 () | 86909..87412 | + | 504 | Protein_100 | conjugal transfer protein TraH | - |
| C5097_RS24880 () | 87414..90296 | + | 2883 | WP_047627586.1 | conjugal transfer mating pair stabilization protein TraG | - |
| C5097_RS24885 () | 90306..90881 | + | 576 | WP_000869347.1 | hypothetical protein | - |
| C5097_RS24890 () | 91049..91786 | + | 738 | WP_000812365.1 | complement resistance protein TraT | - |
| C5097_RS24895 () | 91928..93451 | + | 1524 | Protein_104 | type IV conjugative transfer system coupling protein TraD | - |
| C5097_RS24900 () | 93527..97456 | + | 3930 | Protein_105 | Multifunctional conjugation protein TraI | Relaxase |
| C5097_RS24905 () | 97541..98287 | - | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| C5097_RS24910 () | 98302..99609 | - | 1308 | Protein_107 | IS21 family transposase ISEc12 | Transposase |
| C5097_RS24915 () | 99662..100875 | + | 1214 | WP_139371347.1 | IS3 family transposase IS629 | Transposase |
| C5097_RS24925 () | 101941..102798 | - | 858 | WP_158701383.1 | incFII family plasmid replication initiator RepA | - |
| C5097_RS24930 () | 102791..102865 | - | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| C5097_RS24940 () | 103100..103357 | - | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
| C5097_RS24945 () | 103641..103847 | - | 207 | WP_001362723.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 103839..103895 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 103839..103895 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 103839..103895 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 103839..103895 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| C5097_RS24955 () | 104070..104354 | - | 285 | WP_106668553.1 | hypothetical protein | - |
| C5097_RS24960 () | 104544..105275 | - | 732 | WP_106668554.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| C5097_RS24965 () | 105272..105838 | - | 567 | WP_000469208.1 | DUF2726 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|