MGE detailed information
MGE type: Prophage MGE length: 55624 bp
Accession: NZ_CP026961 Location: 93666..149289 Organism: Staphylococcus aureus strain FDAARGOS_10 Replicon: chromosome
Accession: NZ_CP026961 Location: 93666..149289 Organism: Staphylococcus aureus strain FDAARGOS_10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RK68_RS00635 () | 89850..90164 | - | 315 | Protein_121 | MAP domain-containing protein | - |
| RK68_RS00640 () | 90151..91905 | - | 1755 | WP_001549158.1 | extracellular adherence protein Eap/Map | - |
| RK68_RS00645 () | 92291..92541 | + | 251 | Protein_123 | sphingomyelin phosphodiesterase | - |
| RK68_RS00650 () | 92863..93042 | + | 180 | WP_000669789.1 | hypothetical protein | - |
| RK68_RS00660 () | 93353..93613 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| RK68_RS00665 () | 93666..94016 | - | 351 | WP_000702262.1 | Staphylococcal complement inhibitor | VF |
| RK68_RS00670 () | 94699..95148 | + | 450 | WP_000727643.1 | Chemotaxis inhibitory protein | VF |
| RK68_RS00675 () | 95243..95578 | - | 336 | Protein_128 | SH3 domain-containing protein | - |
| RK68_RS00685 () | 96228..96719 | - | 492 | WP_000920037.1 | Staphylokinase | VF |
| RK68_RS00690 () | 96910..97665 | - | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| RK68_RS00695 () | 97677..97931 | - | 255 | WP_000611512.1 | phage holin | - |
| RK68_RS00700 () | 97983..98090 | + | 108 | WP_001791821.1 | hypothetical protein | - |
| - () | 98012..98151 | + | 140 | NuclAT_0 | - | - |
| - () | 98012..98151 | + | 140 | NuclAT_0 | - | - |
| - () | 98012..98151 | + | 140 | NuclAT_0 | - | - |
| - () | 98012..98151 | + | 140 | NuclAT_0 | - | - |
| - () | 98020..98075 | + | 56 | - | - | Antitoxin Detail |
| RK68_RS00705 () | 98143..98319 | - | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| RK68_RS00710 () | 98469..98765 | - | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| RK68_RS00715 () | 98823..99110 | - | 288 | WP_001040261.1 | hypothetical protein | - |
| RK68_RS00720 () | 99157..99309 | - | 153 | WP_001153681.1 | hypothetical protein | - |
| RK68_RS00725 () | 99299..103084 | - | 3786 | WP_000582137.1 | hypothetical protein | - |
| RK68_RS00730 () | 103100..104590 | - | 1491 | WP_001154327.1 | phage tail family protein | - |
| RK68_RS00735 () | 104590..109242 | - | 4653 | WP_001133528.1 | phage tail tape measure protein | - |
| RK68_RS00740 () | 109298..109420 | - | 123 | WP_000570353.1 | hypothetical protein | - |
| RK68_RS00745 () | 109480..109926 | - | 447 | WP_000442601.1 | hypothetical protein | - |
| RK68_RS00750 () | 109991..110944 | - | 954 | WP_000570652.1 | Ig-like domain-containing protein | - |
| RK68_RS00755 () | 110945..111325 | - | 381 | WP_000611452.1 | hypothetical protein | - |
| RK68_RS00760 () | 111322..111699 | - | 378 | WP_000501244.1 | HK97 gp10 family phage protein | - |
| RK68_RS00765 () | 111699..112034 | - | 336 | WP_000975314.1 | head-tail adaptor protein | - |
| RK68_RS00770 () | 112021..112353 | - | 333 | WP_001177487.1 | head-tail connector protein | - |
| RK68_RS00775 () | 112362..112520 | - | 159 | WP_001252099.1 | hypothetical protein | - |
| RK68_RS00780 () | 112556..113803 | - | 1248 | WP_000849951.1 | phage major capsid protein | - |
| RK68_RS00785 () | 113891..114475 | - | 585 | WP_000032525.1 | HK97 family phage prohead protease | - |
| RK68_RS00790 () | 114468..115718 | - | 1251 | WP_000511067.1 | phage portal protein | - |
| RK68_RS00795 () | 115724..115924 | - | 201 | WP_000365300.1 | hypothetical protein | - |
| RK68_RS00800 () | 115938..117632 | - | 1695 | WP_000133304.1 | phage terminase large subunit | - |
| RK68_RS00805 () | 117635..118102 | - | 468 | WP_000919026.1 | phage terminase small subunit P27 family | - |
| RK68_RS00810 () | 118232..118576 | - | 345 | WP_000817289.1 | HNH endonuclease | - |
| RK68_RS00815 () | 118592..119044 | - | 453 | WP_000406195.1 | nucleoside triphosphate pyrophosphohydrolase family protein | - |
| RK68_RS00820 () | 119159..119629 | - | 471 | WP_000282748.1 | hypothetical protein | - |
| RK68_RS00830 () | 119652..119852 | - | 201 | WP_001794311.1 | DUF1514 family protein | - |
| RK68_RS00835 () | 119852..120001 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| RK68_RS00840 () | 119998..120204 | - | 207 | WP_000195759.1 | DUF1381 domain-containing protein | - |
| RK68_RS00845 () | 120221..120394 | - | 174 | WP_001209216.1 | hypothetical protein | - |
| RK68_RS00850 () | 120431..120967 | - | 537 | WP_001066448.1 | dUTP diphosphatase | - |
| RK68_RS00855 () | 120960..121130 | - | 171 | WP_000714407.1 | hypothetical protein | - |
| RK68_RS00860 () | 121117..121371 | - | 255 | WP_001065078.1 | DUF1024 family protein | - |
| RK68_RS00865 () | 121364..121753 | - | 390 | WP_000219085.1 | acetyltransferase | - |
| RK68_RS00870 () | 121750..122097 | - | 348 | WP_000982695.1 | hypothetical protein | - |
| RK68_RS00875 () | 122161..122409 | - | 249 | WP_001126839.1 | phi PVL orf 51-like protein | - |
| RK68_RS00880 () | 122410..122781 | - | 372 | WP_001029545.1 | hypothetical protein | - |
| RK68_RS00885 () | 122782..122967 | - | 186 | WP_001187234.1 | DUF3113 family protein | - |
| RK68_RS00890 () | 122972..123376 | - | 405 | WP_000049810.1 | DUF1064 domain-containing protein | - |
| RK68_RS00895 () | 123387..123608 | - | 222 | WP_001123688.1 | DUF3269 family protein | - |
| RK68_RS00900 () | 123621..123779 | - | 159 | WP_000256590.1 | hypothetical protein | - |
| RK68_RS00905 () | 123773..124552 | - | 780 | WP_000803062.1 | ATP-binding protein | - |
| RK68_RS00910 () | 124562..125332 | - | 771 | WP_000190253.1 | conserved phage C-terminal domain-containing protein | - |
| RK68_RS00915 () | 125398..125679 | + | 282 | WP_000414755.1 | hypothetical protein | - |
| RK68_RS15330 () | 125672..125821 | - | 150 | WP_001081076.1 | hypothetical protein | - |
| RK68_RS00920 () | 125818..126489 | - | 672 | WP_001199416.1 | hypothetical protein | - |
| RK68_RS00925 () | 126502..127053 | - | 552 | WP_000704705.1 | single-stranded DNA-binding protein | - |
| RK68_RS00930 () | 127084..127863 | - | 780 | WP_000137070.1 | ATP-binding protein | - |
| RK68_RS00935 () | 127856..128077 | - | 222 | WP_000815404.1 | DUF2483 domain-containing protein | - |
| RK68_RS00940 () | 128087..128347 | - | 261 | WP_000291488.1 | hypothetical protein ; Integrase | Integrase |
| RK68_RS00945 () | 128440..128601 | - | 162 | WP_000066020.1 | DUF1270 domain-containing protein | - |
| RK68_RS00950 () | 128598..128918 | - | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| RK68_RS00955 () | 128977..129609 | + | 633 | WP_000275058.1 | hypothetical protein | - |
| RK68_RS00960 () | 129624..129764 | - | 141 | WP_000939496.1 | hypothetical protein | - |
| RK68_RS00965 () | 129795..129992 | - | 198 | WP_001148855.1 | hypothetical protein | - |
| RK68_RS00970 () | 130008..130757 | - | 750 | Protein_186 | phage antirepressor KilAC domain-containing protein | - |
| RK68_RS00975 () | 130814..131353 | + | 540 | WP_000351241.1 | hypothetical protein | - |
| RK68_RS00980 () | 131377..131637 | - | 261 | WP_000435341.1 | transcriptional regulator | - |
| RK68_RS00985 () | 131655..131879 | - | 225 | WP_000338186.1 | DUF739 family protein | - |
| RK68_RS00990 () | 132038..132808 | + | 771 | WP_001208482.1 | helix-turn-helix domain-containing protein | - |
| RK68_RS00995 () | 133008..133189 | + | 182 | Protein_191 | hypothetical protein | - |
| RK68_RS01000 () | 133225..133371 | + | 147 | WP_001013104.1 | hypothetical protein | - |
| RK68_RS01005 () | 133368..133982 | - | 615 | WP_000191459.1 | hypothetical protein | - |
| RK68_RS01010 () | 134090..135127 | + | 1038 | WP_000857176.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| RK68_RS01015 () | 135178..136008 | + | 831 | Protein_195 | Phospholipase C | VF |
| RK68_RS01020 () | 136246..137262 | - | 1017 | WP_000595324.1 | putative leukocidin-like protein 1 | VF |
| RK68_RS01025 () | 137284..138339 | - | 1056 | WP_000791407.1 | putative leukocidin-like protein 2 | VF |
| RK68_RS01030 () | 138774..139997 | + | 1224 | WP_000206638.1 | ArgE/DapE family deacylase | - |
| RK68_RS01035 () | 140369..141214 | - | 846 | WP_000812008.1 | class I SAM-dependent methyltransferase | - |
| RK68_RS01040 () | 141276..142187 | - | 912 | WP_000825510.1 | Iron(3+)-hydroxamate-binding protein FhuD | VF |
| RK68_RS01045 () | 142348..143655 | + | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| RK68_RS01055 () | 144508..144951 | - | 444 | WP_000022887.1 | GNAT family N-acetyltransferase | - |
| RK68_RS01060 () | 145057..145494 | - | 438 | WP_011447041.1 | hypothetical protein | - |
| RK68_RS01065 () | 145812..146402 | - | 591 | WP_001293058.1 | terminase small subunit | - |
| RK68_RS01070 () | 146399..146611 | - | 213 | WP_000128898.1 | hypothetical protein | - |
| RK68_RS01075 () | 146672..147218 | + | 547 | Protein_206 | site-specific integrase | - |
| RK68_RS01080 () | 147313..148929 | - | 1617 | WP_000240645.1 | 60 kDa chaperonin | VF |
| RK68_RS01085 () | 149005..149289 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| RK68_RS01090 () | 149464..150207 | + | 744 | WP_000197635.1 | CPBP family intramembrane metalloprotease | - |
| RK68_RS01095 () | 150232..151491 | - | 1260 | WP_000120314.1 | hypothetical protein | - |
| RK68_RS01100 () | 151688..152314 | + | 627 | WP_000522384.1 | nitroreductase family protein | - |
| RK68_RS01105 () | 152675..153460 | + | 786 | WP_000867960.1 | carbon-nitrogen family hydrolase | - |
| RK68_RS01110 () | 154057..154191 | - | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus NCTC 8325 | Prophage | TA21487 | NC_007795 | 2033113..2088736 | 0 | |
| Staphylococcus aureus strain HG003 isolate RN1 Scaffold_5 | Prophage | TA10146 | NZ_JPPU01000005 | 180..39322 | 0.009 |