MGE detailed information
MGE type: Genomic_island MGE length: 11793 bp
Accession: NZ_CP026853 Location: 4918012..4929804 Organism: Escherichia coli strain MS7163 Replicon: chromosome
Accession: NZ_CP026853 Location: 4918012..4929804 Organism: Escherichia coli strain MS7163 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MS7163_RS25690 () | 4913703..4915016 | - | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| MS7163_RS25695 () | 4915028..4915306 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| MS7163_RS25700 () | 4915303..4916424 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| MS7163_RS28470 () | 4916669..4916785 | - | 117 | Protein_4705 | VOC family protein | - |
| MS7163_RS25705 () | 4916823..4917041 | - | 219 | Protein_4706 | hypothetical protein | - |
| MS7163_RS25710 () | 4917210..4917956 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| MS7163_RS25715 () | 4918012..4918557 | - | 546 | WP_001338189.1 | N-acetyltransferase | Antitoxin Detail |
| MS7163_RS25720 () | 4918569..4918826 | - | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| MS7163_RS25730 () | 4919203..4919448 | - | 246 | Protein_4710 | GNAT family N-acetyltransferase | - |
| MS7163_RS25740 () | 4919564..4920804 | + | 1241 | Protein_4711 | helicase YjhR | - |
| MS7163_RS25745 () | 4921387..4922367 | - | 981 | WP_000991455.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| MS7163_RS25750 () | 4922432..4923538 | - | 1107 | WP_001299704.1 | N-acetylneuraminate epimerase | - |
| MS7163_RS25755 () | 4923558..4924274 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| MS7163_RS25770 () | 4925728..4926330 | + | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| MS7163_RS25775 () | 4926807..4927403 | + | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| MS7163_RS25785 () | 4927884..4928438 | + | 555 | WP_000695589.1 | Type-1 fimbrial protein, A chain | VF |
| MS7163_RS25790 () | 4928503..4929042 | + | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| MS7163_RS25795 () | 4929079..4929804 | + | 726 | WP_000066568.1 | Chaperone protein FimC | VF |
| MS7163_RS25800 () | 4929871..4932507 | + | 2637 | WP_000120948.1 | fimbrial usher FimD | - |
| MS7163_RS25805 () | 4932517..4933047 | + | 531 | WP_001244823.1 | type 1 fimbria minor subunit FimF | - |
| MS7163_RS25810 () | 4933060..4933563 | + | 504 | WP_000870589.1 | type 1 fimbria minor subunit FimG | - |
| MS7163_RS25815 () | 4933583..4934485 | + | 903 | WP_001338195.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0.01 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0.01 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0.01 |