MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 99066 bp
Accession: NZ_CP026835 Location: 1..99066 Organism: Shigella dysenteriae strain ATCC 49347 Replicon: plasmid unnamed
Accession: NZ_CP026835 Location: 1..99066 Organism: Shigella dysenteriae strain ATCC 49347 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5B83_RS24580 | 198..1790 | + | 1593 | WP_001072392.1 | IS66 family transposase ISEc43 | Transposase |
| C5B83_RS25730 | 1797..1928 | - | 132 | Protein_2 | ATP-binding protein | - |
| C5B83_RS24590 | 2147..2821 | + | 675 | WP_046891833.1 | IS66 family transposase ISSfl3 | Transposase |
| C5B83_RS24595 | 2818..2982 | + | 165 | Protein_4 | IS66 family transposase ISSfl3 | Transposase |
| C5B83_RS24600 | 3131..3292 | + | 162 | Protein_5 | IS110 family transposase ISEc11 | Transposase |
| C5B83_RS24605 | 3365..4533 | + | 1169 | WP_094096743.1 | IS3 family transposase ISLad1 | Transposase |
| C5B83_RS24610 | 4591..5718 | - | 1128 | WP_001063816.1 | IS110 family transposase ISSso6 | Transposase |
| C5B83_RS24615 | 5848..6130 | - | 283 | Protein_8 | IS110 family transposase | - |
| C5B83_RS24630 | 7694..7963 | - | 270 | Protein_10 | IS3 family transposase ISEc48 | Transposase |
| C5B83_RS25735 | 8078..8716 | - | 639 | WP_000607008.1 | hypothetical protein | VF |
| C5B83_RS24640 | 8875..9372 | - | 498 | Protein_12 | IS1 family transposase | - |
| C5B83_RS24645 | 9372..10973 | - | 1602 | WP_004967149.1 | IS66 family transposase ISSfl3 | Transposase |
| C5B83_RS24650 | 10993..11175 | - | 183 | Protein_14 | IS66 family insertion sequence element accessory protein TnpB | - |
| C5B83_RS24660 | 11450..12469 | - | 1020 | WP_129592979.1 | IS110 family transposase ISEc11 | Transposase |
| C5B83_RS24665 | 12618..12782 | - | 165 | Protein_16 | IS66 family transposase ISSfl3 | Transposase |
| C5B83_RS24670 | 12779..13453 | - | 675 | WP_005031011.1 | IS66 family transposase ISSfl3 | Transposase |
| C5B83_RS24675 | 13755..14980 | + | 1226 | WP_171764169.1 | IS3 family transposase IS629 | Transposase |
| C5B83_RS24680 | 15005..15184 | + | 180 | Protein_19 | transposase | - |
| C5B83_RS26295 | 15501..15896 | - | 396 | Protein_20 | hypothetical protein | - |
| C5B83_RS24690 | 15791..16888 | + | 1098 | Protein_21 | group II intron reverse transcriptase/maturase | - |
| C5B83_RS24695 | 16971..17150 | + | 180 | Protein_22 | transposase domain-containing protein | - |
| C5B83_RS24700 | 17177..17662 | - | 486 | WP_000003223.1 | IS110 family transposase ISSde4 | Transposase |
| C5B83_RS24705 | 17918..18898 | - | 981 | WP_000431557.1 | ParB family protein | - |
| C5B83_RS24710 | 18898..20097 | - | 1200 | WP_000200287.1 | AAA family ATPase | - |
| C5B83_RS24715 | 20271..20405 | - | 135 | Protein_26 | hypothetical protein | - |
| C5B83_RS24720 | 20419..20757 | - | 339 | Protein_27 | IS1 family transposase IS1N | Transposase |
| C5B83_RS24725 | 20824..21606 | - | 783 | Protein_28 | IS21 family transposase IS100kyp | Transposase |
| C5B83_RS24730 | 21603..22614 | - | 1012 | Protein_29 | IS21 family transposase IS100kyp | Transposase |
| C5B83_RS24740 | 22701..23061 | - | 361 | Protein_30 | IS1 family transposase IS1N | Transposase |
| C5B83_RS24745 | 23401..23955 | - | 555 | Protein_31 | IS3 family transposase IS3H | Transposase |
| C5B83_RS24750 | 24098..24220 | + | 123 | Protein_32 | transposase domain-containing protein | - |
| C5B83_RS24755 | 24482..25048 | - | 567 | WP_024259653.1 | hypothetical protein | VF |
| C5B83_RS25740 | 25330..25644 | - | 315 | WP_011114726.1 | hypothetical protein | - |
| C5B83_RS25330 | 25722..25832 | - | 111 | Protein_35 | IS3 family transposase | - |
| C5B83_RS24775 | 26156..26833 | - | 678 | WP_000026472.1 | hypothetical protein | VF |
| C5B83_RS24780 | 27204..27341 | - | 138 | Protein_37 | IS630 family transposase | - |
| C5B83_RS24785 | 27423..27721 | - | 299 | Protein_38 | transposase | - |
| C5B83_RS24790 | 28310..28469 | - | 160 | Protein_39 | IS3 family transposase | - |
| C5B83_RS24795 | 28473..29627 | - | 1155 | Protein_40 | IS66 family transposase ISCro1 | Transposase |
| C5B83_RS24800 | 29647..29994 | - | 348 | WP_000622995.1 | IS66 family transposase ISCro1 | Transposase |
| C5B83_RS24805 | 29994..30370 | - | 377 | Protein_42 | IS66 family transposase ISCro1 | Transposase |
| C5B83_RS24810 | 30437..31839 | + | 1403 | Protein_43 | IS4 family transposase IS4 | Transposase |
| C5B83_RS25745 | 31796..32077 | - | 282 | Protein_44 | IS66 family transposase ISCro1 | Transposase |
| C5B83_RS25445 | 32108..32395 | - | 288 | WP_001077959.1 | hypothetical protein | - |
| C5B83_RS24825 | 32473..32902 | + | 430 | Protein_46 | IS91 family transposase ISEc37 | Transposase |
| C5B83_RS24830 | 33089..33326 | + | 238 | Protein_47 | ATP-binding protein | - |
| C5B83_RS26305 | 33440..33698 | + | 259 | Protein_48 | integrase core domain-containing protein | - |
| C5B83_RS24835 | 33747..34325 | + | 579 | WP_000868561.1 | hypothetical protein | - |
| C5B83_RS24840 | 34434..34692 | - | 259 | Protein_50 | IS1 family transposase | - |
| C5B83_RS24845 | 34676..35239 | + | 564 | Protein_51 | ISL3 family transposase ISKox3 | Transposase |
| C5B83_RS24850 | 35364..36083 | + | 720 | WP_001121865.1 | Phosphothreonine lyase OspF | VF |
| C5B83_RS24855 | 36515..38224 | + | 1710 | WP_005041841.1 | hypothetical protein | VF |
| C5B83_RS24860 | 38309..38575 | - | 267 | Protein_54 | hypothetical protein | - |
| C5B83_RS24865 | 38914..39599 | + | 686 | Protein_55 | IS3 family transposase ISSfl11 | Transposase |
| C5B83_RS24870 | 39616..40083 | + | 468 | Protein_56 | IS66 family transposase IS679 | Transposase |
| C5B83_RS24875 | 40085..41151 | + | 1067 | Protein_57 | IS3 family transposase IS2 | Transposase |
| C5B83_RS26310 | 41136..41542 | + | 407 | Protein_58 | type 3 secretion system effector OspC4 | - |
| C5B83_RS26470 | 42648..42770 | - | 123 | WP_000537156.1 | IS3 family transposase IS629 | Transposase |
| C5B83_RS24895 | 42843..43583 | - | 741 | WP_000850660.1 | PAP2 family phosphatase PhoN2 | - |
| C5B83_RS24900 | 43911..44777 | - | 867 | WP_001046941.1 | hypothetical protein | VF |
| C5B83_RS24905 | 45027..45146 | - | 120 | Protein_63 | DUF3440 domain-containing protein | - |
| C5B83_RS24910 | 45256..45692 | + | 437 | Protein_64 | IS3 family transposase IS2 | Transposase |
| C5B83_RS24920 | 47056..47820 | + | 765 | Protein_66 | IS3 family transposase IS2 | Transposase |
| C5B83_RS24930 | 48062..48434 | + | 373 | Protein_67 | integrase core domain-containing protein | - |
| C5B83_RS24940 | 48996..49943 | - | 948 | WP_005041436.1 | Outer membrane protease IcsP | VF |
| C5B83_RS25455 | 50905..51042 | + | 138 | WP_005026553.1 | hypothetical protein | - |
| C5B83_RS24950 | 51324..51476 | - | 153 | Protein_70 | IS3 family transposase | - |
| C5B83_RS24955 | 51532..52224 | + | 693 | WP_000625268.1 | hypothetical protein | VF |
| C5B83_RS24960 | 52248..53415 | - | 1168 | Protein_72 | IS3 family transposase IS911 | Transposase |
| C5B83_RS24965 | 53489..53827 | + | 339 | Protein_73 | IS3 family transposase IS629 | Transposase |
| C5B83_RS24970 | 53870..54393 | - | 524 | Protein_74 | transposase | - |
| C5B83_RS24975 | 54461..54943 | - | 483 | WP_000405248.1 | GNAT family N-acetyltransferase | Toxin Detail |
| C5B83_RS24980 | 54934..55236 | - | 303 | WP_010921625.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| C5B83_RS24990 | 55508..55780 | + | 273 | WP_000019158.1 | hypothetical protein | - |
| C5B83_RS24995 | 55761..56969 | + | 1209 | WP_046891828.1 | IS91 family transposase ISSbo1 | Transposase |
| C5B83_RS25340 | 57141..57269 | + | 129 | Protein_79 | IS5/IS1182 family transposase | - |
| C5B83_RS25010 | 57418..58872 | - | 1455 | WP_000701106.1 | hypothetical protein | VF |
| C5B83_RS25015 | 59297..60141 | + | 845 | WP_094096542.1 | IS5 family transposase ISSfl7 | Transposase |
| C5B83_RS26315 | 60236..60313 | + | 78 | Protein_82 | IS630 family transposase IS630 | Transposase |
| C5B83_RS25020 | 60386..60667 | - | 282 | Protein_83 | transposase domain-containing protein | - |
| C5B83_RS25025 | 60722..60976 | + | 255 | Protein_84 | IS3 family transposase IS1203 | Transposase |
| C5B83_RS25750 | 61084..61272 | + | 189 | WP_000957863.1 | hypothetical protein | - |
| C5B83_RS25035 | 61282..62202 | + | 921 | Protein_86 | IS91-like element ISSbo1 family transposase | - |
| C5B83_RS25040 | 62219..63561 | - | 1343 | Protein_87 | IS4 family transposase IS4 | Transposase |
| C5B83_RS25045 | 63628..63918 | + | 291 | Protein_88 | IS91 family transposase ISSbo1 | Transposase |
| C5B83_RS25050 | 64090..64413 | + | 324 | Protein_89 | IS110 family transposase IS1663 | Transposase |
| C5B83_RS25060 | 65397..66254 | - | 858 | WP_000130973.1 | incFII family plasmid replication initiator RepA | - |
| C5B83_RS25065 | 66247..66321 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| C5B83_RS25075 | 66545..66805 | - | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| C5B83_RS25080 | 67045..67635 | - | 591 | WP_000766818.1 | DUF2726 domain-containing protein | - |
| C5B83_RS25085 | 67674..67883 | - | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| C5B83_RS25090 | 67929..68390 | - | 462 | WP_001233866.1 | thermonuclease family protein | - |
| C5B83_RS25100 | 68634..68846 | - | 213 | WP_011379083.1 | ANR family transcriptional regulator | - |
| C5B83_RS25105 | 68977..69537 | - | 561 | WP_005056178.1 | fertility inhibition protein FinO | - |
| C5B83_RS25110 | 69592..70338 | - | 747 | WP_000205722.1 | Multifunctional conjugation protein TraI | Relaxase |
| C5B83_RS25115 | 70358..75634 | - | 5277 | Protein_99 | Multifunctional conjugation protein TraI | Relaxase |
| C5B83_RS25125 | 75716..75943 | + | 228 | WP_000450530.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| C5B83_RS25130 | 75943..76341 | + | 399 | WP_000911318.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| C5B83_RS25135 | 76350..78530 | - | 2181 | WP_069661558.1 | type IV conjugative transfer system coupling protein TraD | - |
| C5B83_RS25140 | 78778..79475 | + | 698 | WP_094106546.1 | IS1 family transposase | - |
| C5B83_RS25145 | 79491..80162 | + | 672 | Protein_104 | IS630 family transposase IS630 | Transposase |
| C5B83_RS25150 | 80316..81259 | - | 944 | Protein_105 | Lipid A biosynthesis myristoyltransferase 2 | VF |
| C5B83_RS25155 | 81324..82274 | - | 951 | WP_005045525.1 | virulence factor VirK | - |
| C5B83_RS25160 | 82279..83367 | - | 1089 | WP_005027207.1 | putative hexosyltransferase CapU | - |
| C5B83_RS25165 | 83370..84212 | - | 843 | WP_000931198.1 | polysaccharide deacetylase family protein | - |
| C5B83_RS26320 | 84695..84847 | + | 153 | Protein_109 | hypothetical protein | - |
| C5B83_RS25175 | 84899..85596 | + | 698 | WP_094106546.1 | IS1 family transposase | - |
| C5B83_RS25180 | 85614..86096 | - | 483 | Protein_111 | Protein kinase OspG | VF |
| C5B83_RS26325 | 86179..86348 | - | 170 | Protein_112 | type II toxin-antitoxin system toxin YacB | - |
| C5B83_RS25190 | 86348..86617 | - | 270 | WP_000079956.1 | type II toxin-antitoxin system antitoxin YacA | - |
| C5B83_RS25195 | 86825..88462 | - | 1638 | WP_129593020.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| C5B83_RS25200 | 88724..88831 | - | 108 | WP_023592908.1 | transposase domain-containing protein | - |
| C5B83_RS25205 | 88855..89160 | - | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C5B83_RS25210 | 89162..89380 | - | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C5B83_RS25215 | 89624..90852 | + | 1229 | Protein_118 | IS3-like element IS2 family transposase | - |
| C5B83_RS25225 | 91309..91581 | + | 273 | WP_000019158.1 | hypothetical protein | - |
| C5B83_RS25230 | 91676..92889 | + | 1214 | WP_167544920.1 | IS3 family transposase IS629 | Transposase |
| C5B83_RS25240 | 92953..94083 | + | 1131 | WP_050546159.1 | IS91 family transposase ISSbo1 | Transposase |
| C5B83_RS25245 | 94278..95369 | - | 1092 | Protein_122 | IS66 family transposase ISEc49 | Transposase |
| C5B83_RS25250 | 95377..95944 | + | 568 | Protein_123 | plasmid segregation protein ParM | - |
| C5B83_RS26330 | 95947..96129 | + | 183 | WP_241547534.1 | plasmid partitioning/stability family protein | - |
| C5B83_RS25755 | 96405..96542 | + | 138 | WP_000766699.1 | hypothetical protein | - |
| C5B83_RS25260 | 96674..96949 | - | 276 | WP_000421262.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C5B83_RS25265 | 96949..97233 | - | 285 | WP_001178088.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| C5B83_RS25275 | 97685..97936 | + | 252 | WP_000433928.1 | transporter | - |
| C5B83_RS25280 | 97986..98195 | + | 210 | Protein_129 | peptidoglycan-binding protein | - |
| C5B83_RS26335 | 98277..98378 | - | 102 | Protein_130 | ATP-binding protein | - |
| C5B83_RS25285 | 98530..98886 | + | 357 | WP_000239757.1 | IS66 family transposase IS682 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|