MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 69966 bp
Accession: NZ_CP026806 Location: 1..69966 Organism: Shigella dysenteriae strain 2017C-4522 Replicon: plasmid unnamed
Accession: NZ_CP026806 Location: 1..69966 Organism: Shigella dysenteriae strain 2017C-4522 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P73_RS24225 | 235..795 | + | 561 | WP_005056178.1 | fertility inhibition protein FinO | - |
| C1P73_RS24230 | 924..1136 | + | 213 | WP_011379083.1 | ANR family transcriptional regulator | - |
| C1P73_RS24240 | 1379..1840 | + | 462 | WP_001233866.1 | thermonuclease family protein | - |
| C1P73_RS24245 | 1886..2095 | + | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| C1P73_RS24250 | 2134..2724 | + | 591 | WP_000766818.1 | DUF2726 domain-containing protein | - |
| C1P73_RS24255 | 2964..3224 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| C1P73_RS24265 | 3448..3522 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| C1P73_RS24270 | 3515..4369 | + | 855 | Protein_8 | incFII family plasmid replication initiator RepA | - |
| C1P73_RS24280 | 5353..5676 | - | 324 | Protein_9 | IS110 family transposase IS1663 | Transposase |
| C1P73_RS24285 | 5848..6138 | - | 291 | Protein_10 | IS91 family transposase ISSbo1 | Transposase |
| C1P73_RS24290 | 6205..7547 | + | 1343 | Protein_11 | IS4 family transposase IS4 | Transposase |
| C1P73_RS24295 | 7564..8484 | - | 921 | Protein_12 | IS91-like element ISSbo1 family transposase | - |
| C1P73_RS25225 | 8494..8682 | - | 189 | WP_000957863.1 | hypothetical protein | - |
| C1P73_RS24305 | 8790..9044 | - | 255 | Protein_14 | IS3 family transposase IS1203 | Transposase |
| C1P73_RS24310 | 9099..9380 | + | 282 | Protein_15 | transposase domain-containing protein | - |
| C1P73_RS25860 | 9453..9530 | - | 78 | Protein_16 | IS630 family transposase IS630 | Transposase |
| C1P73_RS24315 | 9625..10468 | - | 844 | Protein_17 | IS5 family transposase ISSfl7 | Transposase |
| C1P73_RS24320 | 10893..12347 | + | 1455 | WP_000701106.1 | hypothetical protein | VF |
| C1P73_RS24790 | 12496..12624 | - | 129 | Protein_19 | IS5/IS1182 family transposase | - |
| C1P73_RS24335 | 12796..14004 | - | 1209 | WP_046891828.1 | IS91 family transposase ISSbo1 | Transposase |
| C1P73_RS24340 | 13985..14257 | - | 273 | WP_000019158.1 | hypothetical protein | - |
| C1P73_RS24350 | 14529..14831 | + | 303 | WP_010921625.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| C1P73_RS24355 | 14822..15304 | + | 483 | WP_000405248.1 | GNAT family N-acetyltransferase | Toxin Detail |
| C1P73_RS24360 | 15372..15895 | + | 524 | Protein_24 | transposase | - |
| C1P73_RS24365 | 15938..16276 | - | 339 | Protein_25 | IS3 family transposase IS629 | Transposase |
| C1P73_RS24370 | 16350..17517 | + | 1168 | Protein_26 | IS3 family transposase IS911 | Transposase |
| C1P73_RS24375 | 17541..18233 | - | 693 | WP_000625268.1 | hypothetical protein | VF |
| C1P73_RS24380 | 18289..18441 | + | 153 | Protein_28 | IS3 family transposase | - |
| C1P73_RS24905 | 18723..18860 | - | 138 | WP_005026553.1 | hypothetical protein | - |
| C1P73_RS24390 | 19822..20768 | + | 947 | Protein_30 | Outer membrane protease IcsP | VF |
| C1P73_RS24400 | 21330..21702 | - | 373 | Protein_31 | integrase core domain-containing protein | - |
| C1P73_RS24410 | 21944..22708 | - | 765 | Protein_32 | IS3 family transposase IS2 | Transposase |
| C1P73_RS24415 | 22823..24051 | + | 1229 | WP_134805288.1 | IS3 family transposase IS2 | Transposase |
| C1P73_RS24420 | 24072..24508 | - | 437 | Protein_34 | IS3 family transposase IS2 | Transposase |
| C1P73_RS24425 | 24618..24737 | + | 120 | Protein_35 | DUF3440 domain-containing protein | - |
| C1P73_RS24430 | 24987..25853 | + | 867 | WP_001046941.1 | hypothetical protein | VF |
| C1P73_RS24435 | 26181..26921 | + | 741 | WP_000850660.1 | PAP2 family phosphatase PhoN2 | - |
| C1P73_RS25865 | 26975..27115 | + | 141 | WP_158250354.1 | hypothetical protein | - |
| C1P73_RS24445 | 27509..28206 | + | 698 | WP_134795416.1 | IS1-like element IS1SD family transposase | - |
| C1P73_RS24455 | 28584..29333 | + | 750 | WP_000828661.1 | phosphatase PAP2 family protein | - |
| C1P73_RS25870 | 29388..29492 | - | 105 | Protein_41 | hypothetical protein | - |
| C1P73_RS24465 | 30395..30760 | - | 366 | WP_073691780.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| C1P73_RS24470 | 30853..32081 | + | 1229 | Protein_44 | IS3-like element IS2 family transposase | - |
| C1P73_RS24475 | 32249..32644 | - | 396 | WP_000445931.1 | plasmid partitioning/stability family protein | - |
| C1P73_RS24480 | 32644..33603 | - | 960 | WP_046891834.1 | plasmid segregation protein ParM | - |
| C1P73_RS24505 | 35863..36024 | - | 162 | Protein_48 | IS110 family transposase ISEc11 | Transposase |
| C1P73_RS24510 | 36173..36337 | - | 165 | Protein_49 | IS66 family transposase ISSfl3 | Transposase |
| C1P73_RS24515 | 36334..37008 | - | 675 | WP_046891833.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P73_RS24525 | 37227..37334 | + | 108 | Protein_51 | ATP-binding protein | - |
| C1P73_RS24535 | 37465..38592 | + | 1128 | WP_001063816.1 | IS110 family transposase ISSso6 | Transposase |
| C1P73_RS24545 | 38885..40477 | - | 1593 | WP_001072392.1 | IS66 family transposase ISEc43 | Transposase |
| C1P73_RS24550 | 40508..40858 | - | 351 | WP_129593018.1 | IS66 family transposase ISEc47 | Transposase |
| C1P73_RS24555 | 40855..41211 | - | 357 | WP_000239757.1 | IS66 family transposase IS682 | Transposase |
| C1P73_RS25875 | 41363..41464 | + | 102 | Protein_56 | ATP-binding protein | - |
| C1P73_RS24560 | 41546..41755 | - | 210 | Protein_57 | peptidoglycan-binding protein | - |
| C1P73_RS24565 | 41805..42056 | - | 252 | WP_000433928.1 | transporter | - |
| C1P73_RS24575 | 42508..42792 | + | 285 | WP_001178088.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| C1P73_RS24580 | 42792..43067 | + | 276 | WP_000421262.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C1P73_RS25230 | 43199..43336 | - | 138 | WP_000766699.1 | hypothetical protein | - |
| C1P73_RS25880 | 43612..43794 | - | 183 | WP_241547534.1 | plasmid partitioning/stability family protein | - |
| C1P73_RS24590 | 43797..44363 | - | 567 | Protein_63 | plasmid segregation protein ParM | - |
| C1P73_RS24600 | 44371..45462 | + | 1092 | Protein_64 | IS66 family transposase ISEc49 | Transposase |
| C1P73_RS24605 | 45657..46787 | - | 1131 | WP_050546159.1 | IS91 family transposase ISSbo1 | Transposase |
| C1P73_RS24620 | 48159..48431 | - | 273 | WP_000019158.1 | hypothetical protein | - |
| C1P73_RS24630 | 48888..50116 | - | 1229 | Protein_68 | IS3-like element IS2 family transposase | - |
| C1P73_RS24635 | 50360..50578 | + | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C1P73_RS24640 | 50580..50885 | + | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C1P73_RS24645 | 50921..51016 | + | 96 | Protein_71 | transposase domain-containing protein | - |
| C1P73_RS24650 | 51278..52915 | + | 1638 | WP_129593020.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| C1P73_RS24655 | 53123..53392 | + | 270 | WP_000079956.1 | type II toxin-antitoxin system antitoxin YacA | - |
| C1P73_RS25885 | 53392..53561 | + | 170 | Protein_74 | type II toxin-antitoxin system toxin YacB | - |
| C1P73_RS24665 | 53644..54126 | + | 483 | Protein_75 | Protein kinase OspG | VF |
| C1P73_RS25890 | 54893..55045 | - | 153 | Protein_77 | hypothetical protein | - |
| C1P73_RS25240 | 55011..55163 | + | 153 | WP_171763767.1 | hypothetical protein | - |
| C1P73_RS24675 | 55527..56369 | + | 843 | WP_000931198.1 | polysaccharide deacetylase family protein | - |
| C1P73_RS24680 | 56372..57460 | + | 1089 | WP_005027207.1 | putative hexosyltransferase CapU | - |
| C1P73_RS24685 | 57465..58415 | + | 951 | WP_005045525.1 | virulence factor VirK | - |
| C1P73_RS24690 | 58480..59424 | + | 945 | WP_005027201.1 | Lipid A biosynthesis myristoyltransferase 2 | VF |
| C1P73_RS24695 | 59578..60249 | - | 672 | Protein_83 | IS630 family transposase IS630 | Transposase |
| C1P73_RS24710 | 61210..63390 | + | 2181 | WP_069661558.1 | type IV conjugative transfer system coupling protein TraD | - |
| C1P73_RS24715 | 63399..63797 | - | 399 | WP_000911318.1 | type II toxin-antitoxin system VapC family toxin | - |
| C1P73_RS24720 | 63797..64024 | - | 228 | WP_000450530.1 | toxin-antitoxin system antitoxin VapB | - |
| C1P73_RS25245 | 64106..66847 | + | 2742 | WP_171765939.1 | Multifunctional conjugation protein TraI | Relaxase |
| C1P73_RS25895 | 67045..68721 | + | 1677 | Protein_89 | conjugative transfer relaxase/helicase TraI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|