MGE detailed information
MGE type: IScluster/Tn MGE length: 28132 bp
Accession: NZ_CP026791 Location: 4240..32371 Organism: Shigella flexneri strain 61-4982 Replicon: plasmid unnamed
Accession: NZ_CP026791 Location: 4240..32371 Organism: Shigella flexneri strain 61-4982 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P80_RS00010 () | 269..479 | + | 211 | Protein_1 | hemolysin expression modulator Hha | - |
| C1P80_RS00015 () | 517..1107 | + | 591 | WP_000766818.1 | DUF2726 domain-containing protein | - |
| C1P80_RS00020 () | 1347..1607 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| C1P80_RS00025 () | 1829..1903 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| C1P80_RS00030 () | 1896..2938 | + | 1043 | Protein_5 | incFII family plasmid replication initiator RepA | - |
| C1P80_RS24340 () | 3449..3640 | + | 192 | WP_000829592.1 | hypothetical protein | - |
| C1P80_RS00045 () | 3870..5064 | - | 1195 | Protein_7 | IS91 family transposase ISSbo1 | Transposase |
| C1P80_RS00050 () | 5074..5262 | - | 189 | WP_000957853.1 | hypothetical protein | - |
| C1P80_RS00060 () | 5665..9757 | + | 4093 | Protein_9 | serine protease autotransporter toxin SepA | - |
| C1P80_RS00065 () | 9926..10540 | - | 615 | Protein_10 | IS21 family transposase ISEc10 | Transposase |
| C1P80_RS00070 () | 10572..10982 | - | 411 | Protein_11 | IS66 family transposase ISEc23 | Transposase |
| C1P80_RS00075 () | 11026..12236 | - | 1211 | Protein_12 | IS3 family transposase IS629 | Transposase |
| C1P80_RS00080 () | 12262..12905 | - | 644 | Protein_13 | IS1 family transposase | - |
| C1P80_RS00085 () | 13309..14763 | + | 1455 | WP_075332747.1 | hypothetical protein | VF |
| C1P80_RS24210 () | 14912..15040 | - | 129 | Protein_15 | IS5/IS1182 family transposase | - |
| C1P80_RS00105 () | 16400..16672 | - | 273 | WP_000019158.1 | hypothetical protein | - |
| C1P80_RS00115 () | 16944..17246 | + | 303 | WP_010921625.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| C1P80_RS00120 () | 17237..17719 | + | 483 | WP_000405245.1 | GNAT family N-acetyltransferase | Toxin Detail |
| C1P80_RS00125 () | 17787..18310 | + | 524 | Protein_20 | IS3 family transposase ISSfl11 | Transposase |
| C1P80_RS00130 () | 18353..19562 | - | 1210 | Protein_21 | IS3 family transposase IS629 | Transposase |
| C1P80_RS00135 () | 19614..21305 | - | 1692 | WP_134796984.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| C1P80_RS00145 () | 22840..23109 | - | 270 | Protein_24 | IS3 family transposase ISEc48 | Transposase |
| C1P80_RS24345 () | 23224..23862 | - | 639 | WP_000607008.1 | hypothetical protein | VF |
| C1P80_RS00155 () | 24021..24491 | - | 471 | Protein_26 | IS1 family transposase IS1N | Transposase |
| C1P80_RS00165 () | 24690..25364 | + | 675 | WP_004967157.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P80_RS00170 () | 25361..25710 | + | 350 | Protein_28 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P80_RS00175 () | 25707..26258 | + | 552 | Protein_29 | IS66 family transposase ISSfl3 | Transposase |
| C1P80_RS00180 () | 26316..27472 | + | 1157 | WP_134796986.1 | IS3 family transposase IS600 | Transposase |
| C1P80_RS00185 () | 27516..28445 | + | 930 | Protein_31 | IS66 family transposase ISSfl3 | Transposase |
| C1P80_RS00190 () | 28634..28818 | + | 185 | Protein_32 | ATP-binding protein | - |
| C1P80_RS00195 () | 28918..29127 | - | 210 | Protein_33 | peptidoglycan-binding protein | - |
| C1P80_RS00200 () | 29177..29356 | - | 180 | Protein_34 | MFS transporter | - |
| C1P80_RS00210 () | 29880..30164 | + | 285 | WP_024260696.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| C1P80_RS00215 () | 30164..30439 | + | 276 | WP_000421262.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C1P80_RS00225 () | 30665..31362 | - | 698 | Protein_37 | IS1 family transposase | - |
| C1P80_RS00230 () | 31418..32371 | + | 954 | Protein_38 | IS66 family transposase ISEc49 | Transposase |
| C1P80_RS00235 () | 32907..33125 | + | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C1P80_RS00240 () | 33127..33432 | + | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C1P80_RS00245 () | 33468..33563 | + | 96 | Protein_41 | transposase domain-containing protein | - |
| C1P80_RS00250 () | 33825..35462 | + | 1638 | WP_000936806.1 | T3SS effector E3 ubiquitin-protein ligase IpaH9.8 | - |
| C1P80_RS00255 () | 35670..35939 | + | 270 | Protein_43 | hypothetical protein | - |
| C1P80_RS24600 () | 35936..36162 | + | 227 | Protein_44 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C1P80_RS00265 () | 36191..36781 | + | 591 | WP_000705601.1 | type III secretion system effector protein kinase OspG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|