MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 189871 bp
Accession: NZ_CP026787        Location: 1..189871         Organism: Shigella dysenteriae strain NCTC 9718       Replicon: plasmid unnamed


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
C1P65_RS23860 () 1..350 - 350 WP_171764685.1 transposase -
C1P65_RS23865 () 414..605 + 192 WP_134801818.1 Outer membrane usher protein PapC VF
C1P65_RS23870 () 529..1117 + 589 Protein_2 IS3 family transposase -
C1P65_RS23875 () 1143..1284 - 142 Protein_3 IS21 family transposase -
C1P65_RS23885 () 1505..1802 + 298 Protein_4 replication regulatory protein RepA -
C1P65_RS23890 () 2021..2068 + 48 WP_077822033.1 hypothetical protein -
C1P65_RS23895 () 2061..2915 + 855 Protein_6 incFII family plasmid replication initiator RepA -
C1P65_RS26095 () 3695..3934 + 240 WP_158249426.1 hypothetical protein -
C1P65_RS23900 () 4007..4206 + 200 Protein_8 transposase -
C1P65_RS23905 () 4343..5035 - 693 WP_000625266.1 hypothetical protein VF
C1P65_RS23910 () 5091..5243 + 153 Protein_10 IS3 family transposase -
C1P65_RS23920 () 6624..7570 + 947 Protein_11 Outer membrane protease IcsP VF
C1P65_RS23930 () 8132..8378 - 247 Protein_12 IS3 family transposase -
C1P65_RS23940 () 8622..8741 + 120 Protein_13 Tn3 family transposase TnpA_ISNpu13 Transposase
C1P65_RS23945 () 8991..9857 + 867 WP_001046940.1 hypothetical protein VF
C1P65_RS23950 () 10186..10926 + 741 WP_000850660.1 PAP2 family phosphatase PhoN2 -
C1P65_RS23960 () 11267..12232 - 966 Protein_16 hypothetical protein VF
C1P65_RS23970 () 12309..13003 + 695 WP_134801664.1 IS1 family transposase -
C1P65_RS23975 () 13459..13977 - 519 Protein_18 IS66 family transposase IS679 Transposase
C1P65_RS23980 () 13994..14679 - 686 Protein_19 IS3 family transposase ISSfl11 Transposase
C1P65_RS23990 () 15369..17078 - 1710 WP_134802640.1 hypothetical protein VF
C1P65_RS24000 () 18846..19565 - 720 WP_001121864.1 Phosphothreonine lyase OspF VF
C1P65_RS24005 () 19735..20298 - 564 Protein_23 ISL3 family transposase ISKox3 Transposase
C1P65_RS24010 () 20294..20540 + 247 Protein_24 IS1 family transposase -
C1P65_RS24015 () 20649..21227 - 579 WP_000868555.1 hypothetical protein -
C1P65_RS26385 () 21653..21890 - 238 Protein_26 ATP-binding protein -
C1P65_RS24025 () 22077..22506 - 430 Protein_27 IS91 family transposase IS91 Transposase
C1P65_RS25985 () 22584..22871 + 288 WP_001082153.1 hypothetical protein -
C1P65_RS24040 () 22902..23549 + 648 Protein_29 IS66 family transposase ISCro1 Transposase
C1P65_RS24045 () 23549..23896 + 348 WP_000622997.1 IS66 family transposase ISCro1 Transposase
C1P65_RS24050 () 23916..25145 + 1230 Protein_31 IS66 family transposase IS679 Transposase
C1P65_RS24055 () 25149..25308 + 160 Protein_32 IS3 family transposase -
C1P65_RS24060 () 25897..26195 + 299 Protein_33 IS256 family transposase IS1414 Transposase
C1P65_RS24065 () 26277..26414 + 138 Protein_34 IS630 family transposase -
C1P65_RS24070 () 26786..27462 + 677 Protein_35 hypothetical protein VF
C1P65_RS26100 () 27974..28288 + 315 WP_011114726.1 hypothetical protein -
C1P65_RS24090 () 28570..29136 + 567 WP_024263014.1 hypothetical protein VF
C1P65_RS26580 () 29398..29520 - 123 Protein_38 transposase domain-containing protein -
C1P65_RS24100 () 29708..30873 + 1166 WP_134801821.1 IS3 family transposase IS3H Transposase
C1P65_RS24105 () 31213..31574 + 362 Protein_40 IS1 family transposase IS1N Transposase
C1P65_RS24115 () 31661..32671 + 1011 Protein_41 IS21 family transposase IS100kyp Transposase
C1P65_RS24120 () 32668..33449 + 782 Protein_42 IS21 family transposase IS100 Transposase
C1P65_RS24125 () 33516..33854 + 339 Protein_43 IS1 family transposase -
C1P65_RS24135 () 34175..35374 + 1200 WP_000200286.1 AAA family ATPase -
C1P65_RS24140 () 35374..36354 + 981 WP_000431558.1 ParB/RepB/Spo0J family partition protein -
C1P65_RS24145 () 36610..37092 + 483 Protein_46 IS110 family transposase ISSde4 Transposase
C1P65_RS24150 () 37122..37301 - 180 Protein_47 transposase domain-containing protein -
C1P65_RS24155 () 37384..38616 - 1233 WP_023592848.1 group II intron reverse transcriptase/maturase -
C1P65_RS24165 () 39087..39266 - 180 Protein_49 IS66 family transposase IS679 Transposase
C1P65_RS24170 () 39291..40512 - 1222 Protein_50 IS3 family transposase IS629 Transposase
C1P65_RS24175 () 40564..42288 - 1725 WP_011379044.1 putative E3 ubiquitin-protein ligase ipaH4.5 VF
C1P65_RS24180 () 42716..44386 - 1671 WP_171764686.1 putative E3 ubiquitin-protein ligase ipaH7.8 VF
C1P65_RS24185 () 44743..44922 + 180 Protein_53 transposase -
C1P65_RS24190 () 44939..45153 - 215 Protein_54 IS1 family transposase -
C1P65_RS24195 () 45223..45987 - 765 Protein_55 IS3 family transposase ISSd1 Transposase
C1P65_RS24200 () 46003..46700 - 698 Protein_56 IS1 family transposase -
C1P65_RS24205 () 46756..47156 - 401 Protein_57 IS3 family transposase ISSfl10 Transposase
C1P65_RS26390 () 47221..47361 - 141 Protein_58 IS3 family transposase -
C1P65_RS24220 () 48223..48723 - 501 Protein_60 transposase -
C1P65_RS26395 () 48838..49476 - 639 WP_000607008.1 hypothetical protein VF
C1P65_RS24230 () 49635..50104 - 470 Protein_62 IS1 family transposase IS1N Transposase
C1P65_RS24240 () 50440..50625 + 186 Protein_63 IS21 family transposase IS100 Transposase
C1P65_RS24245 () 50725..50934 - 210 Protein_64 peptidoglycan-binding protein -
C1P65_RS24260 () 51686..51970 + 285 WP_001178088.1 ribbon-helix-helix domain-containing protein Antitoxin Detail
C1P65_RS24265 () 51970..52245 + 276 WP_000421263.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
C1P65_RS26400 () 52377..52514 - 138 WP_000766699.1 hypothetical protein -
C1P65_RS24270 () 52606..52971 - 366 WP_000361390.1 plasmid partitioning/stability family protein -
C1P65_RS24275 () 52974..53542 - 569 Protein_69 plasmid segregation protein ParM -
C1P65_RS24280 () 53550..54640 + 1091 Protein_70 IS66 family transposase ISEc49 Transposase
C1P65_RS24285 () 55016..55709 - 694 Protein_71 IS1 family transposase -
C1P65_RS24290 () 55949..56167 + 219 WP_000813626.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
C1P65_RS24295 () 56169..56474 + 306 WP_001159860.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
C1P65_RS24300 () 56510..56605 + 96 Protein_74 transposase domain-containing protein -
C1P65_RS24305 () 56733..57427 + 695 WP_087786203.1 IS1-like element IS1N family transposase -
C1P65_RS24310 () 57641..59278 + 1638 WP_000936810.1 E3 ubiquitin-protein ligase ipaH9.8 VF
C1P65_RS24315 () 59486..59755 + 270 WP_000079957.1 hypothetical protein -
C1P65_RS26585 () 59752..59978 + 227 Protein_78 type II toxin-antitoxin system RelE/ParE family toxin -
C1P65_RS24325 () 60007..60597 + 591 WP_000705601.1 Protein kinase OspG VF
C1P65_RS26405 () 60936..61220 + 285 Protein_80 IS66 family transposase ISCro1 Transposase
C1P65_RS24335 () 61283..62629 + 1347 Protein_81 IS4 family transposase IS4 Transposase
C1P65_RS26410 () 62643..62834 - 192 Protein_82 IS66 family insertion sequence element accessory protein TnpB -
C1P65_RS24345 () 62832..63156 + 325 Protein_83 IS3 family transposase -
C1P65_RS24350 () 63186..66098 - 2913 WP_023636847.1 ankyrin repeat protein -
C1P65_RS24355 () 66101..66217 + 117 WP_004996477.1 hypothetical protein -
C1P65_RS24360 () 66581..67422 + 842 Protein_86 polysaccharide deacetylase family protein -
C1P65_RS24365 () 67425..68513 + 1089 WP_005015483.1 putative hexosyltransferase CapU -
C1P65_RS24370 () 68518..69468 + 951 WP_004970430.1 virulence factor VirK -
C1P65_RS24375 () 69533..70476 + 944 Protein_89 Lipid A biosynthesis myristoyltransferase 2 VF
C1P65_RS24380 () 70674..71189 + 516 Protein_90 IS66 family transposase ISCro1 Transposase
C1P65_RS26590 () 71187..71318 + 132 Protein_91 IS66 family transposase ISCro1 Transposase
C1P65_RS24385 () 71463..71885 - 423 Protein_92 hypothetical protein -
C1P65_RS24390 () 72058..72816 + 759 Protein_93 IS4 family transposase IS421 Transposase
C1P65_RS24400 () 74079..75861 + 1783 Protein_95 type IV conjugative transfer system coupling protein TraD -
C1P65_RS24405 () 75870..76268 - 399 WP_000911312.1 tRNA(fMet)-specific endonuclease VapC Toxin Detail
C1P65_RS24410 () 76268..76495 - 228 WP_000450529.1 toxin-antitoxin system antitoxin VapB Antitoxin Detail
C1P65_RS24415 () 76577..76996 + 420 WP_011379018.1 Multifunctional conjugation protein TraI Relaxase
C1P65_RS24420 () 76983..81839 + 4857 WP_005015506.1 Multifunctional conjugation protein TraI Relaxase
C1P65_RS24425 () 81859..82605 + 747 WP_000205723.1 conjugal transfer pilus acetylase TraX -
C1P65_RS24430 () 82660..83220 + 561 WP_000139365.1 fertility inhibition protein FinO -
C1P65_RS24435 () 83350..83562 + 213 WP_004971339.1 ANR family transcriptional regulator -
C1P65_RS24445 () 83806..83967 + 162 Protein_103 endonuclease -
C1P65_RS24450 () 83983..84680 - 698 Protein_104 IS1 family transposase -
C1P65_RS24455 () 84727..85044 + 318 Protein_105 thermonuclease family protein -
C1P65_RS24460 () 85090..85298 + 209 Protein_106 hemolysin expression modulator Hha -
C1P65_RS24465 () 85447..86140 - 694 Protein_107 IS1 family transposase -
C1P65_RS24470 () 86188..86700 + 513 Protein_108 DUF2726 domain-containing protein -
C1P65_RS24475 () 86940..87200 + 261 WP_000083819.1 replication regulatory protein RepA -
C1P65_RS24485 () 87424..87498 + 75 WP_001365705.1 RepA leader peptide Tap -
C1P65_RS24490 () 87491..88348 + 858 WP_000130974.1 incFII family plasmid replication initiator RepA -
C1P65_RS24495 () 89458..90666 - 1209 WP_000198558.1 IS91 family transposase ISSbo1 Transposase
C1P65_RS24500 () 90647..90919 - 273 WP_000019161.1 hypothetical protein -
C1P65_RS24505 () 90939..91121 - 183 WP_000895967.1 hypothetical protein -
C1P65_RS24510 () 91281..94998 + 3718 Protein_115 Serine protease SepA autotransporter VF
C1P65_RS26415 () 96264..96820 - 557 Protein_117 E3 ubiquitin--protein ligase -
C1P65_RS24525 () 96837..97534 - 698 Protein_118 IS1 family transposase -
C1P65_RS24530 () 97684..97950 - 267 WP_000957713.1 hypothetical protein VF
C1P65_RS24535 () 98132..98533 - 402 Protein_120 DDE-type integrase/transposase/recombinase -
C1P65_RS24540 () 98962..99750 + 789 WP_005116773.1 AraC family invasion system transcriptional regulator VirF -
C1P65_RS24545 () 99743..100066 - 324 Protein_122 IS21 family transposase IS100 Transposase
C1P65_RS24555 () 100264..101473 + 1210 Protein_123 IS3 family transposase IS629 Transposase
C1P65_RS24570 () 102796..103179 + 384 Protein_125 IS66 family transposase ISEc47 Transposase
C1P65_RS24575 () 103211..103846 + 636 Protein_126 IS21 family transposase ISEc10 Transposase
C1P65_RS24580 () 104015..104389 - 375 Protein_127 Serine protease SepA autotransporter VF
C1P65_RS24585 () 104456..105612 + 1157 WP_134802642.1 IS3 family transposase ISSd1 Transposase
C1P65_RS24590 () 105836..107044 - 1209 WP_119178644.1 IS91 family transposase ISSbo1 Transposase
C1P65_RS24595 () 107025..107297 - 273 WP_000019161.1 hypothetical protein -
C1P65_RS26595 () 107372..108169 + 798 Protein_131 putative E3 ubiquitin-protein ligase ipaH7.8 VF
C1P65_RS26600 () 108152..108835 + 684 Protein_132 putative E3 ubiquitin-protein ligase ipaH7.8 VF
C1P65_RS24605 () 108878..109401 - 524 Protein_133 IS3 family transposase ISSfl11 Transposase
C1P65_RS24610 () 109469..109951 - 483 WP_000405248.1 GNAT family N-acetyltransferase Toxin Detail
C1P65_RS24615 () 109942..110244 - 303 WP_162147618.1 DUF1778 domain-containing protein Antitoxin Detail
C1P65_RS24620 () 110658..111392 - 735 Protein_136 IS21 family transposase IS100kyp Transposase
C1P65_RS24625 () 111525..112667 - 1143 Protein_137 IS91 family transposase ISSbo1 Transposase
C1P65_RS24630 () 112648..112920 - 273 WP_000019161.1 hypothetical protein -
C1P65_RS24640 () 113003..113527 - 525 Protein_139 IS66 family transposase ISSfl3 Transposase
C1P65_RS24645 () 113664..113837 - 174 WP_011379008.1 transposase -
C1P65_RS24650 () 114178..115632 + 1455 WP_011379007.1 hypothetical protein VF
C1P65_RS24660 () 115971..117127 + 1157 WP_134801813.1 IS3 family transposase IS600 Transposase
C1P65_RS24665 () 117171..117971 + 801 Protein_143 IS3 family transposase -
C1P65_RS26425 () 118086..118427 + 342 Protein_144 IS4 family transposase ISEc13 Transposase
C1P65_RS26605 () 118410..119247 + 838 Protein_145 IS4 family transposase ISEc13 Transposase
C1P65_RS24675 () 119295..120491 - 1197 WP_011379003.1 IS110 family transposase ISEc20 Transposase
C1P65_RS24680 () 120683..121676 - 994 Protein_147 IS21 family transposase IS100kyp Transposase
C1P65_RS26440 () 122290..122427 + 138 WP_001102512.1 hypothetical protein -
C1P65_RS24690 () 123027..123806 + 780 WP_024263024.1 Cysteine protease IpaJ VF
C1P65_RS24695 () 124752..125681 - 930 WP_000227976.1 virulence regulon transcriptional activator VirB -
C1P65_RS24700 () 125888..126124 - 237 WP_000588956.1 Acyl carrier protein VF
C1P65_RS24705 () 126128..128029 - 1902 WP_011379000.1 Invasin IpaA VF
C1P65_RS24710 () 128038..129036 - 999 WP_001028028.1 Invasin IpaD VF
C1P65_RS24715 () 129087..130178 - 1092 WP_000405469.1 Invasin IpaC VF
C1P65_RS24720 () 130198..131940 - 1743 WP_000552051.1 Invasin IpaB VF
C1P65_RS24725 () 131946..132413 - 468 WP_000055835.1 Chaperone protein IpgC VF
C1P65_RS24730 () 132471..133097 - 627 WP_001166524.1 hypothetical protein VF
C1P65_RS24735 () 133113..133502 - 390 WP_010921664.1 hypothetical protein VF
C1P65_RS24740 () 133515..134999 - 1485 WP_000601046.1 hypothetical protein VF
C1P65_RS24750 () 135313..136929 + 1617 WP_000548332.1 Inositol phosphate phosphatase IpgD VF
C1P65_RS24755 () 136939..137301 + 363 WP_000389733.1 Chaperone protein IpgE VF
C1P65_RS24760 () 137301..137759 + 459 WP_000086107.1 hypothetical protein VF
C1P65_RS24765 () 137768..138883 + 1116 WP_001287355.1 Protein MxiG VF
C1P65_RS24770 () 138891..139142 + 252 WP_011378999.1 Protein MxiH VF
C1P65_RS24775 () 139155..139448 + 294 WP_001106824.1 hypothetical protein VF
C1P65_RS24780 () 139454..140179 + 726 WP_000621939.1 Lipoprotein PrgK VF
C1P65_RS24785 () 140176..140703 + 528 WP_000620626.1 Oxygen-regulated invasion protein OrgA VF
C1P65_RS24790 () 140645..141340 + 696 WP_011378997.1 Oxygen-regulated invasion protein OrgB VF
C1P65_RS24795 () 141333..141740 + 408 WP_000609864.1 hypothetical protein VF
C1P65_RS24800 () 141724..142152 + 429 WP_011378996.1 Lipoprotein MxiM VF
C1P65_RS24805 () 142282..142914 + 633 WP_000398257.1 Invasion protein InvF VF
C1P65_RS24810 () 142901..144601 + 1701 WP_000714402.1 Outer membrane protein MxiD VF
C1P65_RS24815 () 144620..145687 + 1068 WP_000887827.1 Protein MxiC VF
C1P65_RS24820 () 145700..147760 + 2061 WP_024263027.1 Protein MxiA VF
C1P65_RS24825 () 147773..148174 + 402 WP_011378994.1 Surface presentation of antigens protein SpaK VF
C1P65_RS24830 () 148178..149470 + 1293 WP_000122614.1 putative ATP synthase SpaL/MxiB VF
C1P65_RS24835 () 149563..149901 + 339 WP_024263028.1 hypothetical protein VF
C1P65_RS24840 () 149888..150766 + 879 WP_001162452.1 Surface presentation of antigens protein SpaN VF
C1P65_RS24845 () 150760..151641 + 882 WP_000944986.1 Surface presentation of antigens protein SpaO VF
C1P65_RS24850 () 151646..152296 + 651 WP_000947538.1 Surface presentation of antigens protein SpaP VF
C1P65_RS24855 () 152311..152571 + 261 WP_001280546.1 hypothetical protein VF
C1P65_RS24860 () 152571..153341 + 771 WP_000355395.1 Surface presentation of antigens protein SpaR VF
C1P65_RS26445 () 153348..154375 + 1028 Protein_183 Surface presentation of antigens protein SpaS VF
C1P65_RS24875 () 154388..154630 + 243 WP_010921676.1 hypothetical protein -
C1P65_RS24880 () 155237..156078 - 842 Protein_185 IS3 family transposase ISSfl11 Transposase
C1P65_RS24885 () 156075..156654 - 580 Protein_186 IS3 family transposase IS3H Transposase
C1P65_RS26450 () 156717..157120 - 404 Protein_187 hypothetical protein -
C1P65_RS24900 () 157671..158387 - 717 WP_005059327.1 hypothetical protein -
C1P65_RS24905 () 158971..159378 - 408 Protein_189 IS110 family transposase -
C1P65_RS24910 () 159402..159863 - 462 Protein_190 ISL3 family transposase ISKox3 Transposase
C1P65_RS24915 () 159916..161125 + 1210 Protein_191 IS3 family transposase IS629 Transposase
C1P65_RS24920 () 161152..161301 - 150 Protein_192 ISL3 family transposase ISEc53 Transposase
C1P65_RS24925 () 161482..161911 - 430 Protein_193 IS91 family transposase IS91 Transposase
C1P65_RS24930 () 162067..162324 - 258 WP_023592977.1 hypothetical protein -
C1P65_RS26455 () 163077..163475 - 399 Protein_195 group II intron reverse transcriptase/maturase -
C1P65_RS24945 () 163478..163844 - 367 Protein_196 IS3 family transposase IS629 Transposase
C1P65_RS24950 () 163846..164530 - 685 Protein_197 IS3 family transposase -
C1P65_RS26115 () 164708..165908 - 1201 Protein_198 alpha-tubulin-specific protease -
C1P65_RS24970 () 167211..170519 + 3309 WP_001071790.1 Outer membrane protein IcsA autotransporter VF
C1P65_RS24980 () 172037..172228 + 192 WP_134801818.1 IS3 family transposase IS629 Transposase
C1P65_RS24985 () 172152..172730 + 579 Protein_203 IS3 family transposase IS629 Transposase
C1P65_RS24990 () 172769..172909 - 141 Protein_204 IS21 family transposase -
C1P65_RS24995 () 172905..173060 + 156 Protein_205 IS110 family transposase -
C1P65_RS25000 () 173132..173392 + 261 WP_000078111.1 replication regulatory protein RepA -
C1P65_RS25010 () 173627..173701 + 75 WP_001365705.1 RepA leader peptide Tap -
C1P65_RS25015 () 173694..174551 + 858 WP_000131021.1 incFII family plasmid replication initiator RepA -
C1P65_RS25020 () 175099..175572 + 474 WP_001217111.1 hypothetical protein -
C1P65_RS25025 () 175645..175844 + 200 Protein_210 transposase -
C1P65_RS25030 () 175981..176673 - 693 WP_000625266.1 hypothetical protein VF
C1P65_RS25035 () 176729..176881 + 153 Protein_212 IS3 family transposase -
C1P65_RS25045 () 178262..179209 + 948 WP_011378982.1 Outer membrane protease IcsP VF
C1P65_RS25055 () 179771..180017 - 247 Protein_214 IS3 family transposase -
C1P65_RS25065 () 180261..180380 + 120 Protein_215 Tn3 family transposase TnpA_ISNpu13 Transposase
C1P65_RS25070 () 180630..181496 + 867 WP_001046940.1 hypothetical protein VF
C1P65_RS25075 () 181825..182565 + 741 WP_000850660.1 PAP2 family phosphatase PhoN2 -
C1P65_RS26460 () 182906..183870 - 965 Protein_218 T3SS effector OspC family protein -
C1P65_RS25105 () 183947..184641 + 695 WP_134801664.1 IS1 family transposase -
C1P65_RS25110 () 185097..185614 - 518 Protein_220 IS66 family transposase IS679 Transposase
C1P65_RS25115 () 185631..186316 - 686 Protein_221 IS3 family transposase ISSfl11 Transposase
C1P65_RS25125 () 187006..188710 - 1705 Protein_222 ShET2/EspL2 family type III secretion system effector toxin -
C1P65_RS25130 () 189070..189871 - 802 Protein_223 IS3 family transposase IS2 Transposase

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance