MGE detailed information
MGE type: Mobilizable plasmid MGE length: 127217 bp
Accession: NZ_CP026404 Location: 1..127217 Organism: Escherichia coli strain ECONIH4 Replicon: plasmid pECO-6357
Accession: NZ_CP026404 Location: 1..127217 Organism: Escherichia coli strain ECONIH4 Replicon: plasmid pECO-6357
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C3F40_RS29210 () | 840..2462 | + | 1623 | WP_001324682.1 | hypothetical protein | - |
| C3F40_RS29215 () | 2554..2676 | + | 123 | Protein_2 | ATP-binding protein | - |
| C3F40_RS29220 () | 2946..3098 | - | 153 | Protein_3 | transposase domain-containing protein | - |
| C3F40_RS29225 () | 3055..3318 | - | 264 | WP_001446199.1 | IS66 family transposase ISPpu19 | Transposase |
| C3F40_RS29230 () | 3333..3596 | + | 264 | WP_001446200.1 | hypothetical protein | - |
| C3F40_RS29235 () | 3824..4105 | + | 282 | WP_000127020.1 | helix-turn-helix domain-containing protein | - |
| C3F40_RS29240 () | 4141..4710 | + | 570 | WP_000350432.1 | Spore protein SP21 | VF |
| C3F40_RS29245 () | 4808..7657 | + | 2850 | WP_000101609.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| C3F40_RS29250 () | 7674..9104 | + | 1431 | WP_023205563.1 | cardiolipin synthase | - |
| C3F40_RS29255 () | 9132..10961 | + | 1830 | WP_021567664.1 | ATP-dependent zinc metalloprotease FtsH 4 | VF |
| C3F40_RS29260 () | 11040..11498 | + | 459 | WP_023205562.1 | Spore protein SP21 | VF |
| C3F40_RS29265 () | 11520..12428 | + | 909 | WP_021567662.1 | heat resistance protein YfdX1 | - |
| C3F40_RS29270 () | 12531..13418 | + | 888 | WP_016239829.1 | heat resistance protein YfdX2 | - |
| C3F40_RS29275 () | 13515..14126 | + | 612 | WP_001090783.1 | heat resistance membrane protein HdeD-GI | - |
| C3F40_RS29280 () | 14206..15351 | + | 1146 | WP_001723515.1 | hypothetical protein | - |
| C3F40_RS29285 () | 15341..15781 | + | 441 | WP_000786816.1 | heat resistance system thioredoxin Trx-GI | - |
| C3F40_RS29290 () | 15785..17500 | + | 1716 | WP_001325264.1 | heat resistance system K+/H+ antiporter KefB-GI | - |
| C3F40_RS29295 () | 17497..17994 | + | 498 | WP_016239752.1 | heat resistance protein PsiE-GI | - |
| C3F40_RS29300 () | 17972..18937 | + | 966 | WP_001721693.1 | M48 family metalloprotease | - |
| C3F40_RS29305 () | 18962..20113 | + | 1152 | WP_016156528.1 | Putative serine protease HhoB | VF |
| C3F40_RS29310 () | 20338..20727 | - | 390 | Protein_21 | IS5 family transposase ISThi1 | Transposase |
| C3F40_RS29315 () | 20958..21953 | + | 996 | WP_000484498.1 | IS110 family transposase IS1663 | Transposase |
| C3F40_RS29325 () | 22060..22764 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| C3F40_RS29335 () | 23069..23329 | + | 261 | Protein_24 | recombinase family protein | - |
| C3F40_RS29340 () | 23386..24090 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| C3F40_RS29345 () | 24155..27076 | + | 2922 | Protein_26 | Tn3 family transposase ISEc63 | Transposase |
| C3F40_RS29350 () | 27306..27617 | + | 312 | WP_000558568.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| C3F40_RS29355 () | 27614..28033 | + | 420 | WP_000990392.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| C3F40_RS29360 () | 28070..28279 | - | 210 | WP_020806042.1 | hypothetical protein | - |
| C3F40_RS29365 () | 29019..29723 | - | 705 | WP_061872725.1 | IS6 family transposase IS15DI | Transposase |
| C3F40_RS29375 () | 30114..30811 | - | 698 | Protein_31 | IS1 family transposase IS1X2 | Transposase |
| C3F40_RS29380 () | 30868..31086 | - | 219 | Protein_32 | hypothetical protein | - |
| C3F40_RS29385 () | 31619..31954 | + | 336 | WP_001039462.1 | hypothetical protein | - |
| C3F40_RS29390 () | 31963..32154 | + | 192 | WP_000861578.1 | hypothetical protein | - |
| C3F40_RS29395 () | 32230..33255 | + | 1026 | WP_001101446.1 | IS110 family transposase ISAve1 | Transposase |
| C3F40_RS29400 () | 33550..34518 | + | 969 | WP_181545343.1 | IS5 family transposase IS903B | Transposase |
| C3F40_RS29405 () | 34564..35241 | - | 678 | WP_001181218.1 | carboxymuconolactone decarboxylase family protein | - |
| C3F40_RS29410 () | 35473..36282 | - | 810 | WP_023280897.1 | N-formylglutamate deformylase | - |
| C3F40_RS29415 () | 36294..37556 | - | 1263 | WP_001515701.1 | imidazolonepropionase | - |
| C3F40_RS29420 () | 37710..38510 | - | 801 | WP_001294851.1 | histidine utilization repressor | - |
| C3F40_RS29425 () | 38752..40125 | + | 1374 | WP_001112072.1 | formimidoylglutamate deiminase | - |
| C3F40_RS29430 () | 40122..40718 | + | 597 | WP_000148344.1 | HutD family protein | - |
| C3F40_RS29435 () | 40957..41943 | + | 987 | WP_000069054.1 | ABC transporter substrate-binding protein | - |
| C3F40_RS29440 () | 41955..42836 | + | 882 | WP_104457630.1 | ABC transporter permease | - |
| C3F40_RS29445 () | 42836..43621 | + | 786 | WP_000121312.1 | Aliphatic sulfonates import ATP-binding protein SsuB | VF |
| C3F40_RS29450 () | 43736..45286 | + | 1551 | WP_000741484.1 | histidine ammonia-lyase | - |
| C3F40_RS29455 () | 45330..47012 | + | 1683 | WP_000993475.1 | urocanate hydratase | - |
| C3F40_RS29460 () | 47071..48237 | + | 1167 | WP_000135555.1 | histidinol-phosphate transaminase | - |
| C3F40_RS29465 () | 48234..49391 | + | 1158 | WP_000217345.1 | alpha-hydroxy-acid oxidizing protein | - |
| C3F40_RS29470 () | 49425..50510 | + | 1086 | WP_001148851.1 | iron-containing alcohol dehydrogenase family protein | - |
| C3F40_RS31390 () | 50600..50911 | - | 312 | WP_024191312.1 | hypothetical protein | - |
| C3F40_RS29475 () | 50965..51945 | + | 981 | WP_032216024.1 | IS5 family transposase ISKpn26 | Transposase |
| C3F40_RS29485 () | 52093..53085 | - | 993 | WP_001145102.1 | hypothetical protein | - |
| C3F40_RS31630 () | 53134..53289 | - | 156 | WP_000074143.1 | hypothetical protein | - |
| C3F40_RS29495 () | 53572..54552 | - | 981 | WP_000019445.1 | IS5 family transposase ISKpn26 | Transposase |
| C3F40_RS29500 () | 54830..55111 | - | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| C3F40_RS29505 () | 55092..55421 | - | 330 | WP_000493286.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C3F40_RS29515 () | 56118..57500 | - | 1383 | WP_000426307.1 | diguanylate cyclase | - |
| C3F40_RS29520 () | 57699..58169 | - | 471 | Protein_59 | IS6 family transposase IS26 | Transposase |
| C3F40_RS29525 () | 58224..58928 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| C3F40_RS29530 () | 59156..59416 | + | 261 | WP_011787805.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| C3F40_RS29535 () | 59416..59727 | + | 312 | WP_011918375.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C3F40_RS29540 () | 59751..62831 | + | 3081 | WP_011787830.1 | Tn3 family transposase ISPsy42 | Transposase |
| C3F40_RS31395 () | 63005..63262 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| C3F40_RS29545 () | 63195..63596 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| C3F40_RS29555 () | 63910..64607 | + | 698 | Protein_66 | IS1 family transposase IS1R | Transposase |
| C3F40_RS29560 () | 64624..64854 | - | 231 | Protein_67 | transposase | - |
| C3F40_RS29565 () | 64919..65623 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| C3F40_RS29575 () | 65689..65991 | + | 303 | Protein_69 | Tn3 family transposase TnpR_ISArsp6 | Transposase |
| C3F40_RS29580 () | 66043..66747 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| C3F40_RS29585 () | 66812..67354 | - | 543 | Protein_71 | IS6 family transposase IS15DI | Transposase |
| C3F40_RS29590 () | 67417..72918 | - | 5502 | Protein_72 | DUF4347 domain-containing protein | - |
| C3F40_RS29595 () | 73466..74446 | + | 981 | WP_016236480.1 | IS5 family transposase ISKpn26 | Transposase |
| C3F40_RS29615 () | 75665..76636 | - | 972 | WP_000817039.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| C3F40_RS29620 () | 76636..77802 | - | 1167 | WP_000523813.1 | Sporulation initiation inhibitor protein Soj | VF |
| C3F40_RS29625 () | 78554..79564 | + | 1011 | WP_000200071.1 | RepB family plasmid replication initiator protein | - |
| C3F40_RS29635 () | 80281..81021 | - | 741 | WP_001515717.1 | tyrosine-type recombinase/integrase | - |
| C3F40_RS29645 () | 81670..81936 | - | 267 | WP_024144810.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| C3F40_RS29650 () | 82167..83840 | - | 1674 | WP_000026497.1 | hypothetical protein | - |
| C3F40_RS29660 () | 84405..85214 | - | 810 | WP_000654269.1 | hypothetical protein | - |
| C3F40_RS29665 () | 85232..85594 | - | 363 | WP_000533745.1 | hypothetical protein | - |
| C3F40_RS31635 () | 85778..86200 | - | 423 | WP_162534719.1 | hypothetical protein | - |
| C3F40_RS29675 () | 86157..86387 | + | 231 | WP_001261282.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| C3F40_RS29680 () | 86384..86800 | + | 417 | WP_001044765.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| C3F40_RS29685 () | 86874..88436 | + | 1563 | WP_001128475.1 | AAA family ATPase | - |
| C3F40_RS29690 () | 88421..89443 | + | 1023 | WP_000361404.1 | helicase UvrD | - |
| C3F40_RS29700 () | 90372..90593 | + | 222 | Protein_88 | IS5 family transposase ISKpn26 | Transposase |
| C3F40_RS29710 () | 90742..91059 | - | 318 | Protein_89 | hypothetical protein | - |
| C3F40_RS29715 () | 91056..91541 | - | 486 | WP_000045622.1 | hypothetical protein | - |
| C3F40_RS29720 () | 92299..93099 | + | 801 | WP_001515712.1 | hypothetical protein | - |
| C3F40_RS29725 () | 93193..94173 | + | 981 | WP_016236480.1 | IS5 family transposase ISKpn26 | Transposase |
| C3F40_RS29730 () | 94203..94900 | - | 698 | Protein_93 | IS1 family transposase | - |
| C3F40_RS29735 () | 95229..97934 | + | 2706 | WP_016239750.1 | HTH-type transcriptional regulator MalT | VF |
| C3F40_RS29740 () | 97977..98720 | - | 744 | Protein_95 | RNA 3'-terminal phosphate cyclase | - |
| C3F40_RS29745 () | 98737..99434 | - | 698 | Protein_96 | IS1 family transposase IS1R | Transposase |
| C3F40_RS29755 () | 99467..100045 | + | 579 | WP_032142246.1 | DUF2726 domain-containing protein | - |
| C3F40_RS29760 () | 100285..100542 | + | 258 | WP_000083825.1 | replication regulatory protein RepA | - |
| C3F40_RS29770 () | 100777..100851 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| C3F40_RS29775 () | 100844..101701 | + | 858 | Protein_100 | incFII family plasmid replication initiator RepA | - |
| C3F40_RS29790 () | 102639..103301 | + | 663 | WP_104457632.1 | CPBP family intramembrane metalloprotease | - |
| C3F40_RS29795 () | 103767..105257 | + | 1491 | WP_011787801.1 | SulP family inorganic anion transporter | - |
| C3F40_RS29800 () | 105292..106149 | + | 858 | WP_055329964.1 | universal stress protein | - |
| C3F40_RS29805 () | 106240..106572 | + | 333 | WP_011787803.1 | TraR/DksA C4-type zinc finger protein | - |
| C3F40_RS29810 () | 106690..107154 | - | 465 | Protein_105 | Tn3 family transposase TnpR_ISArsp6 | Transposase |
| C3F40_RS29815 () | 107208..107912 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| C3F40_RS29820 () | 107971..108222 | + | 252 | WP_001515736.1 | hypothetical protein | - |
| C3F40_RS29825 () | 108336..109481 | + | 1146 | WP_001325018.1 | ABC transporter permease | - |
| C3F40_RS29830 () | 109487..110278 | + | 792 | WP_001325019.1 | putative ribonucleotide transport ATP-binding protein mkl | VF |
| C3F40_RS29835 () | 110280..111218 | + | 939 | WP_000449980.1 | MCE family protein | - |
| C3F40_RS29840 () | 111218..111859 | + | 642 | WP_000948259.1 | membrane integrity-associated transporter subunit PqiC | - |
| C3F40_RS29845 () | 112207..113484 | + | 1278 | WP_001515737.1 | serine dehydratase subunit alpha family protein | - |
| C3F40_RS29850 () | 113566..114084 | + | 519 | Protein_113 | PLP-dependent transferase | - |
| C3F40_RS29860 () | 114141..114838 | + | 698 | Protein_114 | IS1 family transposase | - |
| C3F40_RS29865 () | 114941..116122 | - | 1182 | WP_001086278.1 | tyrosine-type recombinase/integrase | - |
| C3F40_RS29870 () | 116337..116549 | + | 213 | WP_001324690.1 | hypothetical protein | - |
| C3F40_RS29875 () | 116726..117367 | + | 642 | WP_001220537.1 | hypothetical protein | - |
| C3F40_RS29880 () | 117647..118720 | + | 1074 | WP_001232451.1 | hypothetical protein | - |
| C3F40_RS29890 () | 118977..119453 | - | 477 | WP_024176560.1 | hypothetical protein | - |
| C3F40_RS31640 () | 119533..119763 | - | 231 | WP_000119305.1 | hypothetical protein | - |
| C3F40_RS29905 () | 120148..120540 | + | 393 | WP_000341069.1 | hypothetical protein | - |
| C3F40_RS29915 () | 120953..121156 | + | 204 | WP_000493077.1 | hypothetical protein | - |
| C3F40_RS29920 () | 121562..121939 | + | 378 | Protein_123 | HNH endonuclease | - |
| C3F40_RS29925 () | 122056..122883 | + | 828 | WP_000017067.1 | heteromeric transposase endonuclease subunit TnsA | - |
| C3F40_RS29930 () | 122897..124957 | + | 2061 | WP_001324683.1 | DDE-type integrase/transposase/recombinase | - |
| C3F40_RS29935 () | 124950..126560 | + | 1611 | WP_104457633.1 | ATP-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|