MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 126940 bp
Accession: NZ_CP026212 Location: 1..126940 Organism: Citrobacter sp. CFNIH10 Replicon: plasmid pCIT-a850
Accession: NZ_CP026212 Location: 1..126940 Organism: Citrobacter sp. CFNIH10 Replicon: plasmid pCIT-a850
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2U53_RS00855 () | 1494..3803 | - | 2310 | Protein_1 | type IV conjugative transfer system coupling protein TraD | - |
| C2U53_RS29725 () | 3929..4621 | - | 693 | WP_009309879.1 | hypothetical protein | - |
| C2U53_RS00870 () | 5356..8031 | - | 2676 | Protein_3 | conjugal transfer mating pair stabilization protein TraG | - |
| C2U53_RS00885 () | 8313..9389 | + | 1077 | WP_000227969.1 | IS110 family transposase ISEc21 | Transposase |
| C2U53_RS00890 () | 9364..9603 | - | 240 | WP_147614328.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| C2U53_RS00895 () | 9603..10973 | - | 1371 | WP_009309877.1 | conjugal transfer protein TraH | - |
| C2U53_RS00900 () | 10960..11388 | - | 429 | WP_004152689.1 | hypothetical protein | - |
| C2U53_RS00905 () | 11381..11953 | - | 573 | WP_009309876.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| C2U53_RS00910 () | 11925..12164 | - | 240 | WP_009309875.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| C2U53_RS00915 () | 12175..12927 | - | 753 | WP_042946327.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| C2U53_RS00920 () | 12948..13274 | - | 327 | WP_004194451.1 | hypothetical protein | - |
| C2U53_RS00925 () | 13287..13535 | - | 249 | WP_004152675.1 | hypothetical protein | - |
| C2U53_RS00930 () | 13513..13767 | - | 255 | WP_004195500.1 | conjugal transfer protein TrbE | - |
| C2U53_RS00935 () | 13799..15754 | - | 1956 | WP_049192820.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| C2U53_RS00940 () | 15813..16460 | - | 648 | WP_039698503.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| C2U53_RS00945 () | 16604..17206 | - | 603 | WP_022631520.1 | hypothetical protein | - |
| C2U53_RS00955 () | 17927..18475 | - | 549 | WP_022631518.1 | hypothetical protein | - |
| C2U53_RS00960 () | 18490..19482 | - | 993 | WP_020323530.1 | conjugal transfer pilus assembly protein TraU | - |
| C2U53_RS00965 () | 19493..20119 | - | 627 | WP_020314628.1 | type-F conjugative transfer system protein TraW | - |
| C2U53_RS00970 () | 20119..20511 | - | 393 | WP_042946321.1 | type-F conjugative transfer system protein TrbI | - |
| C2U53_RS00975 () | 20508..23147 | - | 2640 | WP_042946320.1 | type IV secretion system protein TraC | - |
| C2U53_RS00980 () | 23219..23617 | - | 399 | WP_074186017.1 | hypothetical protein | - |
| C2U53_RS00985 () | 23625..23915 | - | 291 | WP_023340940.1 | hypothetical protein | - |
| C2U53_RS00990 () | 23912..24316 | - | 405 | WP_042939116.1 | hypothetical protein | - |
| C2U53_RS00995 () | 24383..24694 | - | 312 | WP_023316403.1 | hypothetical protein | - |
| C2U53_RS01000 () | 24695..24913 | - | 219 | WP_023316402.1 | hypothetical protein | - |
| C2U53_RS01005 () | 24937..25221 | - | 285 | WP_023316401.1 | hypothetical protein | - |
| C2U53_RS01010 () | 25226..25636 | - | 411 | WP_020805613.1 | hypothetical protein | - |
| C2U53_RS01015 () | 25768..26337 | - | 570 | WP_023340942.1 | type IV conjugative transfer system lipoprotein TraV | - |
| C2U53_RS01020 () | 26360..26956 | - | 597 | WP_023340943.1 | conjugal transfer protein TraP | - |
| C2U53_RS01025 () | 26949..28373 | - | 1425 | WP_042946342.1 | conjugal transfer protein TraB | - |
| C2U53_RS01030 () | 28373..29113 | - | 741 | WP_032738531.1 | type-F conjugative transfer system secretin TraK | - |
| C2U53_RS01035 () | 29100..29666 | - | 567 | WP_020316627.1 | type IV conjugative transfer system protein TraE | - |
| C2U53_RS01040 () | 29686..29991 | - | 306 | WP_004178059.1 | type IV conjugative transfer system protein TraL | - |
| C2U53_RS01045 () | 30005..30373 | - | 369 | WP_042946346.1 | type IV conjugative transfer system pilin TraA | - |
| C2U53_RS01050 () | 30423..30641 | - | 219 | WP_172619300.1 | TraY domain-containing protein | - |
| C2U53_RS01055 () | 30791..31465 | - | 675 | WP_004197737.1 | hypothetical protein | - |
| C2U53_RS01060 () | 31704..32093 | - | 390 | WP_004197733.1 | relaxosome protein TraM | - |
| C2U53_RS01065 () | 32526..33011 | + | 486 | WP_022631514.1 | hypothetical protein | VF |
| C2U53_RS01070 () | 33044..33373 | - | 330 | WP_011977736.1 | hypothetical protein | - |
| C2U53_RS01075 () | 33406..34227 | - | 822 | WP_004152492.1 | DUF945 domain-containing protein | - |
| C2U53_RS01085 () | 35047..35880 | - | 834 | WP_004152751.1 | type I restriction-modification system subunit M | - |
| C2U53_RS01090 () | 35931..36077 | - | 147 | WP_004152750.1 | hypothetical protein | - |
| C2U53_RS01095 () | 36172..36519 | - | 348 | WP_004152749.1 | hypothetical protein | - |
| C2U53_RS01100 () | 36576..36929 | - | 354 | WP_004152748.1 | hypothetical protein | - |
| C2U53_RS01115 () | 37559..37909 | - | 351 | WP_004153414.1 | hypothetical protein | - |
| C2U53_RS01120 () | 37906..38178 | - | 273 | WP_004152661.1 | hypothetical protein | - |
| C2U53_RS01125 () | 38226..38585 | - | 360 | WP_022631513.1 | hypothetical protein | - |
| C2U53_RS01130 () | 38696..39019 | - | 324 | WP_004199367.1 | hypothetical protein | - |
| C2U53_RS01135 () | 39023..39745 | - | 723 | WP_022631512.1 | plasmid SOS inhibition protein A | - |
| C2U53_RS01140 () | 39742..40173 | - | 432 | WP_040217767.1 | conjugation system SOS inhibitor PsiB | - |
| C2U53_RS01145 () | 40219..42228 | - | 2010 | WP_004152656.1 | ParB/RepB/Spo0J family partition protein | - |
| C2U53_RS01150 () | 42297..42539 | - | 243 | WP_004152655.1 | DUF905 domain-containing protein | - |
| C2U53_RS01155 () | 42587..43099 | - | 513 | WP_004152654.1 | single-stranded DNA-binding protein | - |
| C2U53_RS01160 () | 43839..44156 | - | 318 | WP_004118473.1 | hypothetical protein | - |
| C2U53_RS01165 () | 44191..44445 | - | 255 | WP_074184110.1 | DNA polymerase III subunit theta | - |
| C2U53_RS01170 () | 44633..44824 | - | 192 | WP_001568047.1 | hypothetical protein | - |
| C2U53_RS01175 () | 44867..45373 | - | 507 | WP_042946350.1 | antirestriction protein ArdA | - |
| C2U53_RS30080 () | 45416..45844 | - | 429 | WP_004152356.1 | antirestriction protein | - |
| C2U53_RS01185 () | 46525..47292 | - | 768 | WP_013214013.1 | hypothetical protein | - |
| C2U53_RS01190 () | 47346..47765 | - | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| C2U53_RS01195 () | 47775..47996 | - | 222 | WP_001568042.1 | hypothetical protein | - |
| C2U53_RS01200 () | 47996..48697 | - | 702 | WP_032736797.1 | DNA methylase | - |
| C2U53_RS01205 () | 48769..48971 | - | 203 | Protein_64 | hypothetical protein | - |
| C2U53_RS01210 () | 49134..49364 | - | 231 | WP_001568040.1 | hypothetical protein | - |
| C2U53_RS01215 () | 49428..50099 | - | 672 | WP_032736798.1 | plasmid partitioning/stability family protein | - |
| C2U53_RS01220 () | 50102..51073 | - | 972 | WP_001568038.1 | hypothetical protein | - |
| C2U53_RS01225 () | 51307..51738 | + | 432 | WP_001568036.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| C2U53_RS01230 () | 51738..53009 | + | 1272 | WP_004197646.1 | Y-family DNA polymerase | - |
| C2U53_RS01235 () | 53421..54296 | + | 876 | WP_004098982.1 | RepB family plasmid replication initiator protein | - |
| C2U53_RS01240 () | 54929..55555 | + | 627 | WP_004197649.1 | Chromosome-partitioning ATPase Soj | VF |
| C2U53_RS30085 () | 55552..55854 | + | 303 | WP_071571079.1 | hypothetical protein | - |
| C2U53_RS01250 () | 56358..57152 | - | 795 | WP_004197635.1 | site-specific integrase | - |
| C2U53_RS01255 () | 57350..58366 | - | 1017 | WP_017899884.1 | hypothetical protein | - |
| C2U53_RS01260 () | 58377..58691 | - | 315 | WP_053389906.1 | hypothetical protein | - |
| C2U53_RS01265 () | 58718..59113 | - | 396 | WP_017899885.1 | hypothetical protein | - |
| C2U53_RS01270 () | 59282..59587 | - | 306 | WP_013023785.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C2U53_RS01275 () | 59589..59807 | - | 219 | WP_001568025.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C2U53_RS01290 () | 60404..60634 | + | 231 | WP_001261276.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| C2U53_RS01295 () | 60631..61047 | + | 417 | WP_020804312.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| C2U53_RS01300 () | 61088..61966 | - | 879 | WP_032427228.1 | restriction endonuclease | - |
| C2U53_RS01305 () | 62628..63905 | + | 1278 | WP_103214963.1 | HlyD family secretion protein | - |
| C2U53_RS01310 () | 63895..66003 | + | 2109 | WP_032427226.1 | peptidase domain-containing ABC transporter | - |
| C2U53_RS01315 () | 66003..66638 | + | 636 | WP_009309912.1 | CPBP family intramembrane metalloprotease | - |
| C2U53_RS01320 () | 66746..67087 | - | 342 | WP_071844672.1 | hypothetical protein | - |
| C2U53_RS01325 () | 67410..68346 | + | 937 | Protein_86 | CAAX protease | - |
| C2U53_RS01330 () | 68537..68977 | - | 441 | WP_047057603.1 | hypothetical protein | - |
| C2U53_RS01335 () | 68996..69589 | - | 594 | WP_009309909.1 | hypothetical protein | - |
| C2U53_RS01340 () | 69688..69924 | - | 237 | Protein_89 | hypothetical protein | - |
| C2U53_RS01345 () | 69881..70111 | + | 231 | WP_001261282.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| C2U53_RS01350 () | 70108..70524 | + | 417 | WP_001044770.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| C2U53_RS01355 () | 70598..72157 | + | 1560 | WP_103215780.1 | AAA family ATPase | - |
| C2U53_RS01360 () | 72199..73167 | - | 969 | WP_072269234.1 | IS5 family transposase IS903B | Transposase |
| C2U53_RS01365 () | 73211..74233 | + | 1023 | WP_000361404.1 | helicase UvrD | - |
| C2U53_RS01370 () | 74777..75685 | + | 909 | WP_032425603.1 | HNH endonuclease | - |
| C2U53_RS01375 () | 75871..76221 | - | 351 | WP_004187110.1 | DUF305 domain-containing protein | - |
| C2U53_RS01380 () | 76369..76800 | - | 432 | WP_020803533.1 | silver-binding protein SilE | - |
| C2U53_RS01385 () | 77051..77329 | - | 279 | Protein_98 | GHKL domain-containing protein | - |
| C2U53_RS01390 () | 77387..78355 | - | 969 | WP_013815099.1 | IS5 family transposase IS903B | Transposase |
| C2U53_RS01400 () | 78728..80920 | + | 2193 | WP_004099052.1 | 1,4-alpha-glucan branching enzyme | - |
| C2U53_RS01405 () | 81050..82333 | + | 1284 | WP_004099051.1 | glucose-1-phosphate adenylyltransferase | - |
| C2U53_RS01410 () | 82422..83855 | + | 1434 | WP_009653212.1 | glycogen synthase GlgA | - |
| C2U53_RS01415 () | 83874..86321 | + | 2448 | WP_023157975.1 | glycogen phosphorylase | - |
| C2U53_RS01420 () | 86435..88078 | + | 1644 | WP_004197675.1 | phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) | - |
| C2U53_RS01425 () | 88203..88769 | + | 567 | WP_004197678.1 | LuxR family transcriptional regulator | - |
| C2U53_RS01430 () | 89104..89382 | + | 279 | WP_004197671.1 | hypothetical protein | - |
| C2U53_RS01435 () | 89410..89601 | - | 192 | Protein_107 | hypothetical protein | - |
| C2U53_RS01440 () | 89622..91019 | - | 1398 | WP_009653207.1 | ISNCY family transposase ISKpn21 | Transposase |
| C2U53_RS01445 () | 91130..92662 | + | 1533 | WP_009310015.1 | IS3 family transposase ISKpn38 | Transposase |
| C2U53_RS01450 () | 92810..93205 | - | 396 | WP_004143398.1 | ISNCY family transposase ISKpn21 | Transposase |
| C2U53_RS01455 () | 93254..94600 | - | 1347 | WP_077253535.1 | ISNCY family transposase ISLad2 | Transposase |
| C2U53_RS01460 () | 94826..95458 | + | 633 | WP_001567369.1 | hypothetical protein | - |
| C2U53_RS01465 () | 95487..96890 | - | 1404 | WP_001567368.1 | ISNCY family transposase ISKpn21 | Transposase |
| C2U53_RS01470 () | 97002..98534 | + | 1533 | WP_009310015.1 | IS3 family transposase ISKpn38 | Transposase |
| C2U53_RS01475 () | 98693..99175 | - | 483 | WP_003026803.1 | GNAT family N-acetyltransferase | Toxin Detail |
| C2U53_RS01480 () | 99163..99429 | - | 267 | WP_003026799.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| C2U53_RS01490 () | 99874..100104 | - | 231 | WP_004206660.1 | hypothetical protein | - |
| C2U53_RS01495 () | 100118..100321 | - | 204 | WP_004206661.1 | hemolysin expression modulator Hha | - |
| C2U53_RS01500 () | 100382..100873 | - | 492 | WP_004206662.1 | hypothetical protein | - |
| C2U53_RS01505 () | 101007..102218 | - | 1212 | WP_032415728.1 | hypothetical protein | - |
| C2U53_RS01510 () | 102215..102463 | - | 249 | WP_004193994.1 | hypothetical protein | - |
| C2U53_RS01515 () | 102821..103171 | + | 351 | WP_004206664.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| C2U53_RS01520 () | 103223..103585 | + | 363 | WP_004206665.1 | arsenite efflux transporter metallochaperone ArsD | - |
| C2U53_RS01525 () | 103603..105354 | + | 1752 | WP_016151356.1 | arsenite efflux transporter ATPase subunit ArsA | - |
| C2U53_RS01530 () | 105402..106691 | + | 1290 | WP_004206668.1 | arsenite efflux transporter membrane subunit ArsB | - |
| C2U53_RS01535 () | 106704..107129 | + | 426 | WP_004206670.1 | glutaredoxin-dependent arsenate reductase | - |
| C2U53_RS01540 () | 107162..107590 | - | 429 | WP_004206671.1 | GNAT family N-acetyltransferase | - |
| C2U53_RS01545 () | 107712..108710 | - | 999 | WP_103215775.1 | Arsenical pump-driving ATPase | VF |
| C2U53_RS01550 () | 108704..109012 | - | 309 | Protein_129 | IS3 family transposase ISLad1 | Transposase |
| C2U53_RS01555 () | 109029..110105 | - | 1077 | WP_000227969.1 | IS110 family transposase ISEc21 | Transposase |
| C2U53_RS01565 () | 110387..110566 | - | 180 | Protein_131 | DDE-type integrase/transposase/recombinase | - |
| C2U53_RS01570 () | 110647..112155 | - | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| C2U53_RS01580 () | 112828..113499 | - | 672 | Protein_133 | IS3 family transposase ISEc52 | Transposase |
| C2U53_RS01585 () | 113655..113816 | + | 162 | WP_001326844.1 | hypothetical protein | - |
| C2U53_RS01590 () | 113813..114424 | - | 612 | WP_000176305.1 | DUF2913 family protein | - |
| C2U53_RS01595 () | 114478..114759 | - | 282 | WP_040212832.1 | hypothetical protein | - |
| C2U53_RS01600 () | 114932..115267 | + | 336 | WP_011977766.1 | C2H2-type zinc finger protein | - |
| C2U53_RS01605 () | 116255..117268 | - | 1014 | WP_015065551.1 | replication protein | - |
| C2U53_RS01610 () | 117261..117812 | - | 552 | WP_022631532.1 | hypothetical protein | - |
| C2U53_RS01615 () | 117805..117882 | - | 78 | WP_014386216.1 | RepA leader peptide Tap | - |
| C2U53_RS01620 () | 118094..118363 | - | 270 | WP_022631531.1 | replication regulatory protein RepA | - |
| C2U53_RS01625 () | 118499..118978 | - | 480 | WP_023157996.1 | Phospholipase D | VF |
| C2U53_RS01630 () | 119154..119462 | - | 309 | WP_015065549.1 | hypothetical protein | - |
| C2U53_RS01635 () | 119459..120109 | - | 651 | WP_014343480.1 | DUF2726 domain-containing protein | - |
| C2U53_RS01640 () | 120165..120809 | - | 645 | WP_004153014.1 | hypothetical protein | - |
| C2U53_RS01645 () | 120859..121461 | - | 603 | WP_013023836.1 | hypothetical protein | - |
| C2U53_RS01650 () | 121622..122215 | - | 594 | WP_042946331.1 | fertility inhibition protein FinO | - |
| C2U53_RS01655 () | 122371..123096 | - | 726 | WP_015065543.1 | type-F conjugative transfer system pilin acetylase TraX | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|