MGE detailed information
MGE type: Prophage MGE length: 50619 bp
Accession: NZ_CP026063 Location: 88710..139328 Organism: Staphylococcus aureus strain FDAARGOS_14 Replicon: chromosome
Accession: NZ_CP026063 Location: 88710..139328 Organism: Staphylococcus aureus strain FDAARGOS_14 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RK72_RS00520 () | 85214..85504 | - | 291 | WP_000671712.1 | MAP domain-containing protein | - |
| RK72_RS00525 () | 85519..86949 | - | 1431 | WP_001557458.1 | extracellular adherence protein Eap/Map | - |
| RK72_RS00530 () | 87335..87585 | + | 251 | Protein_86 | sphingomyelin phosphodiesterase | - |
| RK72_RS00535 () | 87907..88086 | + | 180 | WP_000669789.1 | hypothetical protein | - |
| RK72_RS00545 () | 88397..88657 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| RK72_RS00550 () | 88710..89060 | - | 351 | WP_000702262.1 | Staphylococcal complement inhibitor | VF |
| RK72_RS00555 () | 89743..90192 | + | 450 | WP_000727643.1 | Chemotaxis inhibitory protein | VF |
| RK72_RS00560 () | 90287..90622 | - | 336 | Protein_91 | SH3 domain-containing protein | - |
| RK72_RS00570 () | 91272..91763 | - | 492 | WP_000920041.1 | Staphylokinase | VF |
| RK72_RS00575 () | 91954..92709 | - | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| RK72_RS00580 () | 92721..92975 | - | 255 | WP_000611512.1 | phage holin | - |
| RK72_RS00585 () | 93027..93134 | + | 108 | WP_001791821.1 | hypothetical protein | - |
| - () | 93056..93195 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 93056..93195 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 93056..93195 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 93056..93195 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 93064..93119 | + | 56 | - | - | Antitoxin Detail |
| RK72_RS00590 () | 93187..93363 | - | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| RK72_RS00595 () | 93513..93809 | - | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| RK72_RS00600 () | 93867..94154 | - | 288 | WP_001040261.1 | hypothetical protein | - |
| RK72_RS00605 () | 94201..94353 | - | 153 | WP_001153681.1 | hypothetical protein | - |
| RK72_RS00610 () | 94343..98128 | - | 3786 | WP_000582137.1 | hypothetical protein | - |
| RK72_RS00615 () | 98144..99634 | - | 1491 | WP_001154327.1 | phage tail family protein | - |
| RK72_RS00620 () | 99634..104286 | - | 4653 | WP_001133528.1 | phage tail tape measure protein | - |
| RK72_RS00625 () | 104342..104464 | - | 123 | WP_000570353.1 | hypothetical protein | - |
| RK72_RS00630 () | 104524..104970 | - | 447 | WP_000442601.1 | hypothetical protein | - |
| RK72_RS00635 () | 105035..105988 | - | 954 | WP_000570652.1 | Ig-like domain-containing protein | - |
| RK72_RS00640 () | 105989..106369 | - | 381 | WP_000611452.1 | hypothetical protein | - |
| RK72_RS00645 () | 106366..106743 | - | 378 | WP_000501244.1 | HK97 gp10 family phage protein | - |
| RK72_RS00650 () | 106743..107078 | - | 336 | WP_000975314.1 | head-tail adaptor protein | - |
| RK72_RS00655 () | 107065..107397 | - | 333 | WP_001177487.1 | head-tail connector protein | - |
| RK72_RS00660 () | 107406..107564 | - | 159 | WP_001252099.1 | hypothetical protein | - |
| RK72_RS00665 () | 107600..108847 | - | 1248 | WP_000849950.1 | phage major capsid protein | - |
| RK72_RS00670 () | 108935..109519 | - | 585 | WP_000032525.1 | HK97 family phage prohead protease | - |
| RK72_RS00675 () | 109512..110762 | - | 1251 | WP_000511067.1 | phage portal protein | - |
| RK72_RS00680 () | 110768..110968 | - | 201 | WP_000365300.1 | hypothetical protein | - |
| RK72_RS00685 () | 110982..112676 | - | 1695 | WP_000133304.1 | phage terminase large subunit | - |
| RK72_RS00690 () | 112679..113146 | - | 468 | WP_000919026.1 | phage terminase small subunit P27 family | - |
| RK72_RS00695 () | 113276..113620 | - | 345 | WP_000817289.1 | HNH endonuclease | - |
| RK72_RS00700 () | 113636..114088 | - | 453 | WP_000406194.1 | nucleoside triphosphate pyrophosphohydrolase family protein | - |
| RK72_RS00705 () | 114203..114691 | - | 489 | WP_000282749.1 | hypothetical protein | - |
| RK72_RS00715 () | 114714..114914 | - | 201 | WP_001794311.1 | DUF1514 family protein | - |
| RK72_RS00720 () | 114914..115063 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| RK72_RS00725 () | 115060..115266 | - | 207 | WP_000195759.1 | DUF1381 domain-containing protein | - |
| RK72_RS00730 () | 115283..115456 | - | 174 | WP_001209216.1 | hypothetical protein | - |
| RK72_RS00735 () | 115493..116029 | - | 537 | WP_001066448.1 | dUTP diphosphatase | - |
| RK72_RS00740 () | 116022..116192 | - | 171 | WP_000714407.1 | hypothetical protein | - |
| RK72_RS00745 () | 116179..116433 | - | 255 | WP_001065078.1 | DUF1024 family protein | - |
| RK72_RS00750 () | 116426..116815 | - | 390 | WP_000219085.1 | acetyltransferase | - |
| RK72_RS00755 () | 116812..117159 | - | 348 | WP_000982695.1 | hypothetical protein | - |
| RK72_RS00760 () | 117223..117471 | - | 249 | WP_001126839.1 | phi PVL orf 51-like protein | - |
| RK72_RS00765 () | 117472..117843 | - | 372 | WP_001029545.1 | hypothetical protein | - |
| RK72_RS00770 () | 117844..118029 | - | 186 | WP_001187234.1 | DUF3113 family protein | - |
| RK72_RS00775 () | 118034..118438 | - | 405 | Protein_132 | DUF1064 domain-containing protein | - |
| RK72_RS00780 () | 118449..118670 | - | 222 | WP_001123674.1 | DUF3269 family protein | - |
| RK72_RS00785 () | 118683..118841 | - | 159 | WP_000256589.1 | hypothetical protein | - |
| RK72_RS00790 () | 118835..119614 | - | 780 | WP_000803062.1 | ATP-binding protein | - |
| RK72_RS00795 () | 119624..120394 | - | 771 | WP_000190253.1 | conserved phage C-terminal domain-containing protein | - |
| RK72_RS00800 () | 120460..120741 | + | 282 | WP_000414755.1 | hypothetical protein | - |
| RK72_RS14410 () | 120734..120883 | - | 150 | WP_001081076.1 | hypothetical protein | - |
| RK72_RS00805 () | 120880..121551 | - | 672 | WP_001199416.1 | hypothetical protein | - |
| RK72_RS00810 () | 121564..122115 | - | 552 | WP_000704705.1 | single-stranded DNA-binding protein | - |
| RK72_RS00815 () | 122146..122925 | - | 780 | WP_025444512.1 | ATP-binding protein | - |
| RK72_RS00820 () | 122918..123139 | - | 222 | WP_000815404.1 | DUF2483 domain-containing protein | - |
| RK72_RS00825 () | 123149..123409 | - | 261 | WP_000291488.1 | hypothetical protein ; Integrase | Integrase |
| RK72_RS00830 () | 123502..123663 | - | 162 | WP_000066020.1 | DUF1270 domain-containing protein | - |
| RK72_RS00835 () | 123660..123980 | - | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| RK72_RS00840 () | 124039..124671 | + | 633 | WP_000275058.1 | hypothetical protein | - |
| RK72_RS00845 () | 124686..124826 | - | 141 | WP_000939496.1 | hypothetical protein | - |
| RK72_RS00850 () | 124857..125054 | - | 198 | WP_001148855.1 | hypothetical protein | - |
| RK72_RS00855 () | 125070..125819 | - | 750 | WP_001148337.1 | phage antirepressor KilAC domain-containing protein | - |
| RK72_RS00860 () | 125876..126415 | + | 540 | WP_000351243.1 | hypothetical protein | - |
| RK72_RS00865 () | 126439..126699 | - | 261 | WP_000435341.1 | transcriptional regulator | - |
| RK72_RS00870 () | 126717..126941 | - | 225 | WP_000338185.1 | DUF739 family protein | - |
| RK72_RS00875 () | 127100..127870 | + | 771 | WP_001208482.1 | helix-turn-helix domain-containing protein | - |
| RK72_RS00880 () | 128070..128252 | + | 183 | WP_000705243.1 | hypothetical protein | - |
| RK72_RS00885 () | 128288..128434 | + | 147 | WP_001013104.1 | hypothetical protein | - |
| RK72_RS00890 () | 128431..129045 | - | 615 | WP_000191459.1 | hypothetical protein | - |
| RK72_RS00895 () | 129153..130190 | + | 1038 | WP_000857176.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| RK72_RS00900 () | 130241..131071 | + | 831 | Protein_158 | Phospholipase C | VF |
| RK72_RS00905 () | 131309..132325 | - | 1017 | WP_000595392.1 | putative leukocidin-like protein 1 | VF |
| RK72_RS00910 () | 132347..133402 | - | 1056 | WP_000791411.1 | putative leukocidin-like protein 2 | VF |
| RK72_RS00915 () | 133838..135061 | + | 1224 | WP_000206625.1 | ArgE/DapE family deacylase | - |
| RK72_RS00920 () | 135505..136812 | + | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| RK72_RS00930 () | 137352..138968 | - | 1617 | WP_000240642.1 | 60 kDa chaperonin | VF |
| RK72_RS00935 () | 139044..139328 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| RK72_RS00940 () | 139503..140246 | + | 744 | WP_000197635.1 | CPBP family intramembrane metalloprotease | - |
| RK72_RS00945 () | 140271..141530 | - | 1260 | WP_000120297.1 | hypothetical protein | - |
| RK72_RS00950 () | 141727..142353 | + | 627 | WP_000522381.1 | nitroreductase family protein | - |
| RK72_RS00955 () | 142714..143499 | + | 786 | WP_000867951.1 | carbon-nitrogen family hydrolase | - |
| RK72_RS00960 () | 144099..144233 | - | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus NCTC 8325 | Prophage | TA21487 | NC_007795 | 2033113..2088736 | 0.005 | |
| Staphylococcus aureus strain HG003 isolate RN1 Scaffold_5 | Prophage | TA10146 | NZ_JPPU01000005 | 180..39322 | 0.007 |