MGE detailed information
MGE type: IS/Tn MGE length: 981 bp
Accession: NZ_CP025944 Location: 29421..30401 Organism: Escherichia coli strain SCEC020023 Replicon: plasmid pOXA10_020023
Accession: NZ_CP025944 Location: 29421..30401 Organism: Escherichia coli strain SCEC020023 Replicon: plasmid pOXA10_020023
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1A20_RS00145 () | 24496..25239 | - | 744 | WP_000129823.1 | hypothetical protein | - |
| C1A20_RS00150 () | 25290..25640 | - | 351 | WP_000493378.1 | hypothetical protein | - |
| C1A20_RS00160 () | 26034..27107 | + | 1074 | WP_077890912.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| C1A20_RS00165 () | 27400..28314 | + | 915 | WP_052686739.1 | Abi family protein | - |
| C1A20_RS00170 () | 28569..28799 | + | 231 | WP_001261276.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| C1A20_RS00175 () | 28796..29212 | + | 417 | WP_044864680.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| C1A20_RS00180 () | 29421..30437 | - | 1017 | WP_001310555.1 | IS5 family transposase IS5D | Transposase |
| C1A20_RS00185 () | 30602..33667 | - | 3066 | WP_000002334.1 | tetrathionate reductase subunit TtrA | - |
| C1A20_RS00190 () | 33660..34682 | - | 1023 | WP_044864557.1 | tetrathionate reductase subunit TtrC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | IS/Tn | TA6348 | CP009789 | 3666255..3667235 | 0.003 | |
| Escherichia coli str. K-12 substr. MG1655 | IS/Tn | TA6364 | NC_000913 | 3652182..3653162 | 0.003 |