MGE detailed information
MGE type: Conjugative plasmid MGE length: 129356 bp
Accession: NZ_CP025677 Location: 1..129356 Organism: Escherichia albertii strain ChinaSP140150 Replicon: plasmid pEA-1
Accession: NZ_CP025677 Location: 1..129356 Organism: Escherichia albertii strain ChinaSP140150 Replicon: plasmid pEA-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C0R48_RS25225 () | 1873..2089 | + | 217 | Protein_1 | conjugal transfer protein TrbE | - |
| C0R48_RS25230 () | 2082..2823 | + | 742 | Protein_2 | type-F conjugative transfer system pilin assembly protein TraF | - |
| C0R48_RS25235 () | 2981..3216 | + | 236 | Protein_3 | type-F conjugative transfer system pilin chaperone TraQ | - |
| C0R48_RS25240 () | 3203..3700 | + | 498 | WP_102204221.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| C0R48_RS25245 () | 3750..4046 | + | 297 | Protein_5 | P-type conjugative transfer protein TrbJ | - |
| C0R48_RS25255 () | 4408..5745 | + | 1338 | WP_102204222.1 | conjugal transfer protein TraH | - |
| C0R48_RS27165 () | 5742..8547 | + | 2806 | Protein_7 | conjugal transfer mating pair stabilization protein TraG | - |
| C0R48_RS25280 () | 8580..9101 | + | 522 | WP_000632668.1 | conjugal transfer entry exclusion protein TraS | - |
| C0R48_RS25285 () | 9318..9856 | + | 539 | Protein_9 | complement resistance protein TraT | - |
| C0R48_RS25290 () | 10252..10794 | + | 543 | WP_089075763.1 | hypothetical protein | - |
| C0R48_RS25295 () | 10845..13069 | + | 2225 | Protein_11 | type IV conjugative transfer system coupling protein TraD | - |
| C0R48_RS25305 () | 13467..18336 | + | 4870 | Protein_12 | Multifunctional conjugation protein TraI | Relaxase |
| C0R48_RS25310 () | 18356..19102 | + | 747 | WP_000205770.1 | conjugal transfer pilus acetylase TraX | - |
| C0R48_RS25315 () | 19157..19717 | + | 561 | WP_000139328.1 | fertility inhibition protein FinO | - |
| C0R48_RS25320 () | 19849..20049 | + | 201 | WP_015059022.1 | hypothetical protein | - |
| C0R48_RS25325 () | 20435..21034 | + | 600 | WP_032083981.1 | hypothetical protein | - |
| C0R48_RS25330 () | 21198..21428 | + | 231 | WP_001736714.1 | hypothetical protein | - |
| - () | 21629..21688 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 21629..21688 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 21629..21688 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 21629..21688 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| C0R48_RS25340 () | 21733..21882 | + | 150 | WP_001312851.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| C0R48_RS25345 () | 22166..22414 | + | 249 | WP_000083837.1 | replication regulatory protein RepA | - |
| C0R48_RS25355 () | 22659..22733 | + | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| C0R48_RS25360 () | 22726..23583 | + | 858 | WP_032495102.1 | incFII family plasmid replication initiator RepA | - |
| C0R48_RS25370 () | 24522..25175 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| C0R48_RS27170 () | 25268..25525 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| C0R48_RS25375 () | 25458..25859 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| C0R48_RS25385 () | 26150..26854 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| C0R48_RS25390 () | 26919..27599 | - | 681 | Protein_26 | IS91 family transposase ISAzo26 | Transposase |
| C0R48_RS25395 () | 27871..28575 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| C0R48_RS27175 () | 28581..28721 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| C0R48_RS25405 () | 29207..29944 | + | 738 | WP_001446887.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| C0R48_RS25410 () | 29941..30165 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| C0R48_RS25415 () | 30376..31869 | + | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| C0R48_RS27370 () | 32338..32784 | + | 447 | Protein_32 | DUF3363 domain-containing protein | - |
| C0R48_RS25425 () | 33001..34215 | + | 1215 | WP_023300759.1 | Bicyclomycin resistance protein | ARG |
| C0R48_RS25430 () | 34243..34548 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| C0R48_RS25435 () | 34660..34848 | + | 189 | Protein_35 | IS91 family transposase | - |
| C0R48_RS25440 () | 34815..36014 | - | 1200 | WP_032153701.1 | Tetracycline resistance protein, class C | ARG |
| C0R48_RS25445 () | 36120..36770 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| C0R48_RS25450 () | 36799..37044 | - | 246 | WP_058914914.1 | hypothetical protein | - |
| C0R48_RS25460 () | 37350..38186 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| C0R48_RS25465 () | 38186..38989 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| C0R48_RS25470 () | 39050..39865 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| C0R48_RS25485 () | 40195..40371 | + | 177 | WP_000954592.1 | Arm DNA-binding domain-containing protein | - |
| C0R48_RS25490 () | 40553..41557 | - | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| C0R48_RS25500 () | 41663..42367 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| C0R48_RS25505 () | 42476..42670 | + | 195 | Protein_45 | replication initiation protein | - |
| C0R48_RS25510 () | 42678..43127 | + | 450 | WP_023281052.1 | hypothetical protein | - |
| C0R48_RS27180 () | 43106..43255 | + | 150 | WP_152930637.1 | hypothetical protein | - |
| C0R48_RS25520 () | 43775..44314 | + | 540 | WP_039021305.1 | hypothetical protein | - |
| C0R48_RS25525 () | 44325..44774 | + | 450 | WP_039021304.1 | hypothetical protein | - |
| C0R48_RS25530 () | 44758..45300 | + | 543 | WP_039021303.1 | hypothetical protein | - |
| C0R48_RS25535 () | 45372..45779 | + | 408 | WP_001567331.1 | hypothetical protein | - |
| C0R48_RS25540 () | 45822..46025 | + | 204 | WP_001567330.1 | hypothetical protein | - |
| C0R48_RS25545 () | 46274..48322 | + | 2049 | WP_023281053.1 | site-specific DNA-methyltransferase | - |
| C0R48_RS25550 () | 48327..50963 | + | 2637 | WP_023281054.1 | DEAD/DEAH box helicase family protein | - |
| C0R48_RS25555 () | 51006..51590 | - | 585 | WP_023281055.1 | mobilization protein MobX | - |
| C0R48_RS25560 () | 51603..52406 | - | 804 | Protein_56 | Mobilization protein A | Relaxase |
| C0R48_RS25565 () | 52395..52571 | + | 177 | Protein_57 | IS6 family transposase IS26 | Transposase |
| C0R48_RS25575 () | 52628..53224 | + | 597 | WP_000583524.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| C0R48_RS25590 () | 54798..55502 | - | 705 | WP_032193599.1 | replication initiation protein | - |
| C0R48_RS25595 () | 55532..56236 | - | 705 | WP_102204227.1 | IS6 family transposase IS15DI | Transposase |
| C0R48_RS25600 () | 56435..56758 | - | 324 | WP_001175594.1 | helix-turn-helix domain-containing protein | - |
| C0R48_RS25605 () | 56863..57900 | + | 1038 | WP_044502555.1 | permease | - |
| C0R48_RS25610 () | 58193..58810 | - | 618 | WP_000521603.1 | hypothetical protein | - |
| C0R48_RS25615 () | 59001..60557 | - | 1557 | WP_024126035.1 | AAA family ATPase | - |
| C0R48_RS25620 () | 60820..61410 | - | 591 | WP_000194575.1 | hypothetical protein | - |
| C0R48_RS25625 () | 61410..61667 | - | 258 | WP_000343085.1 | hypothetical protein | - |
| C0R48_RS25630 () | 62021..64159 | + | 2139 | WP_000350635.1 | AAA family ATPase | - |
| C0R48_RS25635 () | 64321..64737 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| C0R48_RS25640 () | 64734..64964 | - | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| C0R48_RS25650 () | 65272..66837 | + | 1566 | WP_000741348.1 | ATP-binding protein | - |
| C0R48_RS25655 () | 66894..67763 | - | 870 | WP_000253407.1 | hypothetical protein | - |
| C0R48_RS25660 () | 67765..68853 | - | 1089 | WP_000952231.1 | hypothetical protein | - |
| C0R48_RS25665 () | 69151..70083 | - | 933 | WP_000991830.1 | hypothetical protein | - |
| C0R48_RS25670 () | 70087..71082 | - | 996 | WP_000246635.1 | hypothetical protein | - |
| C0R48_RS25680 () | 71762..72112 | + | 351 | WP_000493378.1 | hypothetical protein | - |
| C0R48_RS25685 () | 72163..72906 | + | 744 | WP_000129823.1 | hypothetical protein | - |
| C0R48_RS25690 () | 72903..73679 | + | 777 | WP_000015958.1 | site-specific integrase | - |
| C0R48_RS25695 () | 73737..73994 | - | 258 | WP_000764642.1 | hypothetical protein | - |
| C0R48_RS27375 () | 74123..74227 | - | 105 | WP_032409716.1 | hypothetical protein | - |
| C0R48_RS25700 () | 74457..74645 | + | 189 | WP_000957857.1 | hypothetical protein | - |
| C0R48_RS25705 () | 74655..75854 | + | 1200 | WP_072648941.1 | IS91 family transposase ISSbo1 | Transposase |
| C0R48_RS25715 () | 76340..76762 | - | 423 | WP_179292036.1 | DNA distortion polypeptide 3 | - |
| C0R48_RS25720 () | 76830..77276 | - | 447 | WP_001074384.1 | hypothetical protein | - |
| C0R48_RS25725 () | 77280..78122 | - | 843 | WP_000435064.1 | replication initiation protein | - |
| C0R48_RS25730 () | 78143..78982 | - | 840 | WP_024129959.1 | replication initiation protein | - |
| C0R48_RS25735 () | 80217..80468 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| C0R48_RS25740 () | 80458..80739 | + | 282 | WP_000220561.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C0R48_RS27185 () | 80978..81070 | - | 93 | Protein_88 | IS6 family transposase | - |
| C0R48_RS25750 () | 81236..82435 | - | 1200 | WP_072648941.1 | IS91 family transposase ISSbo1 | Transposase |
| C0R48_RS25755 () | 82445..82633 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| C0R48_RS25760 () | 82753..84183 | + | 1431 | Protein_91 | IS4 family transposase IS50R | Transposase |
| C0R48_RS25765 () | 84212..85006 | + | 795 | WP_000572405.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| C0R48_RS25770 () | 85027..85263 | + | 237 | Protein_93 | hypothetical protein | - |
| C0R48_RS25775 () | 85313..86017 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| C0R48_RS25780 () | 86106..86585 | + | 480 | WP_000888203.1 | Rrf2 family transcriptional regulator | - |
| C0R48_RS25785 () | 86655..89807 | - | 3153 | WP_058914901.1 | Efflux pump membrane transporter BepE | VF |
| C0R48_RS25790 () | 89831..91006 | - | 1176 | WP_063865358.1 | Efflux pump periplasmic linker BepF | VF |
| C0R48_RS25795 () | 91326..92030 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| C0R48_RS25800 () | 92085..92501 | + | 417 | Protein_99 | serine hydrolase | - |
| C0R48_RS25805 () | 92760..93236 | + | 477 | WP_013023839.1 | WbuC family cupin fold metalloprotein | - |
| C0R48_RS25810 () | 93283..94158 | - | 876 | WP_015387340.1 | Beta-lactamase CTX-M-1 | ARG |
| C0R48_RS25820 () | 94580..95284 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| C0R48_RS27380 () | 95350..95415 | + | 66 | Protein_103 | IS1 family transposase | - |
| C0R48_RS25840 () | 96864..97098 | + | 235 | Protein_104 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C0R48_RS25845 () | 97226..97507 | + | 282 | WP_001333089.1 | hypothetical protein | - |
| C0R48_RS25850 () | 97630..97980 | - | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| C0R48_RS25855 () | 97983..98945 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| C0R48_RS25860 () | 99092..99385 | + | 294 | WP_032146011.1 | hypothetical protein | - |
| C0R48_RS25870 () | 99462..100145 | + | 684 | WP_000085883.1 | DNA methylase | - |
| C0R48_RS25875 () | 100146..100367 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| C0R48_RS25880 () | 100381..100815 | + | 435 | WP_000274503.1 | DUF1380 family protein | - |
| C0R48_RS27385 () | 100866..101642 | + | 777 | WP_001383963.1 | hypothetical protein | - |
| C0R48_RS25895 () | 102183..102485 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| C0R48_RS25900 () | 102532..102954 | + | 423 | WP_000271762.1 | DUF1380 family protein | - |
| C0R48_RS25905 () | 102951..103142 | + | 192 | WP_001027493.1 | hypothetical protein | - |
| C0R48_RS25925 () | 104180..104410 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| C0R48_RS25930 () | 104462..105823 | + | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| C0R48_RS25935 () | 105868..106431 | + | 564 | WP_015059007.1 | class I SAM-dependent methyltransferase | - |
| C0R48_RS27390 () | 106517..106972 | - | 456 | WP_001424978.1 | hypothetical protein | - |
| C0R48_RS25960 () | 107274..107801 | + | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| C0R48_RS25965 () | 107859..108092 | + | 234 | WP_000006003.1 | DUF905 family protein | - |
| C0R48_RS25970 () | 108153..110176 | + | 2024 | Protein_122 | ParB/RepB/Spo0J family partition protein | - |
| C0R48_RS25975 () | 110245..110679 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| C0R48_RS25980 () | 110676..111395 | + | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| - () | 111407..111631 | + | 225 | NuclAT_0 | - | - |
| - () | 111407..111631 | + | 225 | NuclAT_0 | - | - |
| - () | 111407..111631 | + | 225 | NuclAT_0 | - | - |
| - () | 111407..111631 | + | 225 | NuclAT_0 | - | - |
| C0R48_RS27190 () | 111416..111595 | - | 180 | WP_001309233.1 | hypothetical protein | - |
| - () | 111564..111629 | + | 66 | - | - | Antitoxin Detail |
| C0R48_RS25985 () | 111675..111833 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| C0R48_RS27395 () | 112071..112448 | - | 378 | Protein_127 | hypothetical protein | - |
| C0R48_RS26005 () | 112748..113044 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| C0R48_RS26010 () | 113155..113976 | + | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| C0R48_RS26015 () | 114273..114920 | - | 648 | WP_015059008.1 | hypothetical protein | VF |
| C0R48_RS26020 () | 115197..115580 | + | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| C0R48_RS26025 () | 115771..116457 | + | 687 | WP_015059009.1 | PAS domain-containing protein | - |
| C0R48_RS26030 () | 116551..116778 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| C0R48_RS26035 () | 116812..117177 | + | 366 | WP_021519752.1 | type IV conjugative transfer system pilin TraA | - |
| C0R48_RS26040 () | 117192..117503 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| C0R48_RS26045 () | 117525..118091 | + | 567 | WP_000399794.1 | type IV conjugative transfer system protein TraE | - |
| C0R48_RS26050 () | 118102..118806 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| C0R48_RS26055 () | 118806..120233 | + | 1428 | WP_032297072.1 | conjugal transfer protein TraB | - |
| C0R48_RS26060 () | 120223..120813 | + | 591 | WP_000002778.1 | conjugal transfer protein TraP | - |
| C0R48_RS26065 () | 120767..120997 | + | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| C0R48_RS26070 () | 121009..121260 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| C0R48_RS26075 () | 121257..121772 | + | 516 | WP_000809902.1 | type IV conjugative transfer system lipoprotein TraV | - |
| C0R48_RS26080 () | 121907..122128 | + | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| C0R48_RS26085 () | 122288..124915 | + | 2628 | WP_015059012.1 | type IV secretion system protein TraC | - |
| C0R48_RS26090 () | 124912..125298 | + | 387 | WP_015059013.1 | type-F conjugative transfer system protein TrbI | - |
| C0R48_RS26095 () | 125295..125927 | + | 633 | WP_001203735.1 | type-F conjugative transfer system protein TraW | - |
| C0R48_RS26100 () | 125924..126916 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| C0R48_RS26105 () | 126943..127251 | + | 309 | WP_000412447.1 | hypothetical protein | - |
| C0R48_RS26110 () | 127314..127835 | + | 522 | WP_015059014.1 | hypothetical protein | - |
| C0R48_RS26115 () | 127862..128500 | + | 639 | WP_000087532.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| C0R48_RS26120 () | 128497..128868 | + | 372 | WP_000056336.1 | hypothetical protein | - |
| C0R48_RS26125 () | 128894..129316 | + | 423 | WP_001229309.1 | HNH endonuclease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|