MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 53948 bp
Accession: NZ_CP025256 Location: 968351..1022298 Organism: Streptococcus pneumoniae strain Xen35 Replicon: chromosome
Accession: NZ_CP025256 Location: 968351..1022298 Organism: Streptococcus pneumoniae strain Xen35 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXP32_RS05105 () | 963452..964531 | + | 1080 | WP_001028831.1 | peptide chain release factor 1 | - |
| CXP32_RS05110 () | 964531..965370 | + | 840 | WP_000761894.1 | peptide chain release factor N(5)-glutamine methyltransferase | - |
| CXP32_RS05115 () | 965354..965956 | + | 603 | WP_000969302.1 | threonylcarbamoyl-AMP synthase | - |
| CXP32_RS05120 () | 965958..966389 | + | 432 | WP_000942962.1 | GNAT family N-acetyltransferase | - |
| CXP32_RS05125 () | 966451..967707 | + | 1257 | WP_000575527.1 | serine hydroxymethyltransferase | - |
| CXP32_RS05130 () | 967715..968689 | + | 975 | WP_000356096.1 | nucleoid-associated protein | - |
| CXP32_RS05135 () | 968689..969303 | + | 615 | WP_000476386.1 | cell wall hydrolase Pmp23 | - |
| CXP32_RS05140 () | 969377..970351 | + | 975 | WP_001227736.1 | DUF1002 domain-containing protein | - |
| CXP32_RS05145 () | 970425..972056 | + | 1632 | WP_000914584.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| CXP32_RS05150 () | 972270..972548 | + | 279 | WP_000710803.1 | hypothetical protein | - |
| CXP32_RS05155 () | 972794..973012 | + | 219 | WP_001207345.1 | helix-turn-helix transcriptional regulator | - |
| CXP32_RS05165 () | 973405..974430 | + | 1026 | WP_000790743.1 | iron-siderophore ABC transporter substrate-binding protein | - |
| CXP32_RS05170 () | 974420..975427 | + | 1008 | WP_001244687.1 | hypothetical protein | VF |
| CXP32_RS05175 () | 975427..976434 | + | 1008 | WP_001180357.1 | hypothetical protein | VF |
| CXP32_RS05180 () | 976434..977228 | + | 795 | WP_000677519.1 | hypothetical protein | VF |
| CXP32_RS05185 () | 977616..978005 | + | 390 | WP_074017679.1 | restriction endonuclease subunit S | - |
| CXP32_RS11895 () | 977971..978285 | + | 315 | WP_161801538.1 | hypothetical protein | - |
| CXP32_RS12045 () | 978969..979130 | + | 162 | WP_000368174.1 | hypothetical protein | - |
| CXP32_RS05200 () | 979222..980901 | + | 1680 | WP_000031829.1 | hypothetical protein ; Integrase | Integrase |
| CXP32_RS05205 () | 981169..981735 | + | 567 | WP_000234983.1 | hypothetical protein | - |
| CXP32_RS05210 () | 982057..982245 | + | 189 | WP_000179769.1 | hypothetical protein | - |
| CXP32_RS05215 () | 982307..983065 | + | 759 | WP_000262024.1 | ATP-grasp domain-containing protein | - |
| CXP32_RS05220 () | 983123..983977 | + | 855 | WP_000900015.1 | ADP-ribosylglycohydrolase family protein | - |
| CXP32_RS05225 () | 984089..984973 | + | 885 | WP_000710115.1 | diacylglycerol kinase family lipid kinase | - |
| CXP32_RS05230 () | 985137..985499 | + | 363 | WP_000423476.1 | alpha amylase N-terminal ig-like domain-containing protein | - |
| CXP32_RS05235 () | 985480..986876 | + | 1397 | Protein_970 | glycoside hydrolase family 13 protein | - |
| CXP32_RS05240 () | 986962..987279 | + | 318 | WP_000995815.1 | hypothetical protein | - |
| CXP32_RS05245 () | 987325..987606 | + | 282 | WP_000266234.1 | hypothetical protein | - |
| CXP32_RS05250 () | 988051..988527 | + | 477 | WP_000579608.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| CXP32_RS05255 () | 988527..989288 | + | 762 | WP_000405360.1 | toxin PezT | Toxin Detail |
| CXP32_RS05260 () | 989316..990472 | + | 1157 | Protein_975 | hypothetical protein | - |
| CXP32_RS05270 () | 991304..991660 | + | 357 | WP_000817623.1 | hypothetical protein | - |
| CXP32_RS05275 () | 991665..992030 | + | 366 | WP_000401239.1 | MobC family plasmid mobilization relaxosome protein | - |
| CXP32_RS05280 () | 992017..993840 | + | 1824 | WP_000237143.1 | relaxase/mobilization nuclease domain-containing protein | - |
| CXP32_RS05285 () | 993954..994820 | + | 867 | WP_000537005.1 | helix-turn-helix domain-containing protein | - |
| CXP32_RS05290 () | 995411..995662 | + | 252 | WP_000098314.1 | hypothetical protein | - |
| CXP32_RS05295 () | 995891..996193 | + | 303 | WP_000792536.1 | hypothetical protein | - |
| CXP32_RS05300 () | 996190..997536 | + | 1347 | WP_001105427.1 | protein kinase | - |
| CXP32_RS05305 () | 997550..998467 | + | 918 | WP_000995574.1 | hypothetical protein | VF |
| CXP32_RS05310 () | 998464..999264 | + | 801 | WP_000642567.1 | ABC transporter permease | - |
| CXP32_RS05315 () | 999422..999895 | + | 474 | WP_001206386.1 | IS200-IS605 family transposase ISSpn6 | Transposase |
| CXP32_RS05320 () | 1000152..1000373 | + | 222 | WP_000286244.1 | helix-turn-helix domain-containing protein | - |
| CXP32_RS05330 () | 1000820..1001122 | + | 303 | Protein_987 | IS5 family transposase IS1381A | Transposase |
| CXP32_RS05335 () | 1001278..1002507 | + | 1230 | WP_000703352.1 | FtsW/RodA/SpoVE family cell cycle protein | - |
| CXP32_RS05340 () | 1002527..1005223 | + | 2697 | WP_000058203.1 | phosphoenolpyruvate carboxylase | - |
| CXP32_RS05345 () | 1005636..1006640 | + | 1005 | WP_000792163.1 | hypothetical protein | VF |
| CXP32_RS05350 () | 1006709..1007575 | + | 867 | WP_000637238.1 | ABC transporter permease | - |
| CXP32_RS05355 () | 1007572..1008330 | + | 759 | WP_000125408.1 | ABC transporter ATP-binding protein | - |
| CXP32_RS05360 () | 1008420..1010180 | + | 1761 | WP_000227862.1 | DNA primase | - |
| CXP32_RS05365 () | 1010183..1011292 | + | 1110 | WP_000201898.1 | RNA polymerase sigma factor RpoD | - |
| CXP32_RS05370 () | 1011306..1011635 | + | 330 | WP_000331928.1 | metal-sulfur cluster assembly factor | - |
| CXP32_RS05375 () | 1011750..1012793 | + | 1044 | WP_000412280.1 | alpha-galactosylglucosyldiacylglycerol synthase | - |
| CXP32_RS05380 () | 1012809..1014134 | + | 1326 | WP_001219427.1 | glycosyltransferase family 4 protein | - |
| CXP32_RS05385 () | 1014165..1014341 | + | 177 | WP_001256250.1 | PspC domain-containing protein | - |
| CXP32_RS05390 () | 1014400..1014534 | + | 135 | WP_000863859.1 | DUF4044 domain-containing protein | - |
| CXP32_RS05395 () | 1014598..1015908 | + | 1311 | WP_000061641.1 | GTPase ObgE | - |
| CXP32_RS12050 () | 1015918..1016076 | + | 159 | WP_001808548.1 | hypothetical protein | - |
| CXP32_RS05405 () | 1017219..1018478 | + | 1260 | WP_001227083.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| CXP32_RS05410 () | 1018494..1019045 | + | 552 | WP_001028732.1 | GNAT family N-acetyltransferase | - |
| CXP32_RS05415 () | 1019038..1020315 | + | 1278 | WP_000033830.1 | CBS-HotDog domain-containing transcription factor SpxR | - |
| CXP32_RS05420 () | 1020331..1021191 | + | 861 | WP_000631543.1 | methionyl aminopeptidase | - |
| CXP32_RS05430 () | 1021571..1022374 | + | 804 | Protein_1006 | IS5 family transposase | - |
| CXP32_RS05435 () | 1022565..1024856 | + | 2292 | WP_000992862.1 | DNA helicase PcrA | - |
| CXP32_RS05440 () | 1024899..1025579 | + | 681 | WP_000286922.1 | DNA repair protein RadC | - |
| CXP32_RS05445 () | 1025576..1026265 | - | 690 | WP_000743330.1 | gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | - |
| CXP32_RS05450 () | 1026283..1026924 | - | 642 | WP_000653403.1 | redox-sensing transcriptional repressor Rex | - |
| CXP32_RS05455 () | 1027007..1027222 | - | 216 | WP_000462487.1 | DUF4649 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Streptococcus pneumoniae TIGR4 | Integrative and Conjugative Element | TA10019, TA20634 | NC_003028 | 968351..1022298 | 0 |