MGE detailed information
MGE type: Mobilizable plasmid MGE length: 139059 bp
Accession: NZ_CP024863 Location: 1..139059 Organism: Escherichia coli strain AR_0015 Replicon: plasmid unitig_1_pilon
Accession: NZ_CP024863 Location: 1..139059 Organism: Escherichia coli strain AR_0015 Replicon: plasmid unitig_1_pilon
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM342_RS26325 () | 2418..2639 | - | 222 | WP_001278694.1 | conjugal transfer protein TraR | - |
| AM342_RS26330 () | 2774..3289 | - | 516 | WP_000809886.1 | type IV conjugative transfer system lipoprotein TraV | - |
| AM342_RS26335 () | 3289..3648 | - | 360 | WP_001617876.1 | conjugal transfer protein TrbD | - |
| AM342_RS26340 () | 3587..4174 | - | 588 | WP_071587349.1 | conjugal transfer protein TraP | - |
| AM342_RS26345 () | 4143..5594 | - | 1452 | WP_000146687.1 | conjugal transfer protein TraB | - |
| AM342_RS26350 () | 5594..6298 | - | 705 | WP_148725207.1 | type-F conjugative transfer system secretin TraK | - |
| AM342_RS26355 () | 6309..6875 | - | 567 | WP_000399791.1 | type IV conjugative transfer system protein TraE | - |
| AM342_RS26360 () | 6897..7208 | - | 312 | WP_000012107.1 | type IV conjugative transfer system protein TraL | - |
| AM342_RS26365 () | 7213..7575 | - | 363 | WP_000338606.1 | type IV conjugative transfer system pilin TraA | - |
| AM342_RS26370 () | 7609..7836 | - | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| AM342_RS26375 () | 7924..8601 | - | 678 | WP_001348626.1 | PAS domain-containing protein | - |
| AM342_RS26380 () | 8735..9118 | - | 384 | WP_001151566.1 | relaxosome protein TraM | - |
| AM342_RS26385 () | 9449..10051 | + | 603 | WP_000243712.1 | transglycosylase SLT domain-containing protein | - |
| AM342_RS26390 () | 10348..11169 | - | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| AM342_RS26395 () | 11288..11575 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| AM342_RS28645 () | 11600..11806 | - | 207 | WP_024190427.1 | hypothetical protein | - |
| AM342_RS26415 () | 12497..12655 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 12699..12737 | - | 39 | NuclAT_1 | - | Antitoxin Detail |
| - () | 12699..12737 | - | 39 | NuclAT_1 | - | Antitoxin Detail |
| - () | 12699..12737 | - | 39 | NuclAT_1 | - | Antitoxin Detail |
| - () | 12699..12737 | - | 39 | NuclAT_1 | - | Antitoxin Detail |
| - () | 14177..14279 | - | 103 | NuclAT_0 | - | - |
| - () | 14177..14279 | - | 103 | NuclAT_0 | - | - |
| - () | 14177..14279 | - | 103 | NuclAT_0 | - | - |
| - () | 14177..14279 | - | 103 | NuclAT_0 | - | - |
| AM342_RS26425 () | 14291..15010 | - | 720 | WP_001276232.1 | plasmid SOS inhibition protein A | - |
| AM342_RS26430 () | 15007..15441 | - | 435 | WP_000845940.1 | conjugation system SOS inhibitor PsiB | - |
| AM342_RS26435 () | 15496..17454 | - | 1959 | WP_000117179.1 | ParB/RepB/Spo0J family partition protein | - |
| AM342_RS26440 () | 17520..17753 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| AM342_RS26445 () | 17816..18313 | - | 498 | WP_042045560.1 | single-stranded DNA-binding protein | - |
| AM342_RS26450 () | 18463..20364 | - | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| AM342_RS26475 () | 21659..21871 | - | 213 | WP_001348622.1 | hypothetical protein | - |
| AM342_RS26480 () | 21897..22460 | - | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| AM342_RS26485 () | 22508..23869 | - | 1362 | WP_000170714.1 | DUF3560 domain-containing protein | - |
| AM342_RS26490 () | 23921..24151 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| AM342_RS26505 () | 25186..25377 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| AM342_RS26510 () | 25374..25796 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| AM342_RS26515 () | 25843..26145 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| AM342_RS28475 () | 26685..27461 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| AM342_RS26530 () | 27512..27946 | - | 435 | WP_000274437.1 | DUF1380 family protein | - |
| AM342_RS26535 () | 27960..28181 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| AM342_RS26540 () | 28182..28865 | - | 684 | WP_000086185.1 | DNA methylase | - |
| AM342_RS26545 () | 28942..29246 | - | 305 | Protein_36 | hypothetical protein | - |
| AM342_RS26550 () | 29250..30152 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| AM342_RS26565 () | 31019..31990 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| AM342_RS26570 () | 31990..33156 | - | 1167 | WP_000772446.1 | plasmid-partitioning protein SopA | - |
| AM342_RS26575 () | 33744..34499 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| AM342_RS26580 () | 35273..36079 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| AM342_RS26585 () | 36080..36385 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| AM342_RS26590 () | 36387..36605 | - | 219 | WP_023909027.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| AM342_RS26595 () | 37239..37436 | + | 198 | WP_000215657.1 | hypothetical protein | - |
| AM342_RS26600 () | 37433..37717 | - | 285 | WP_000642771.1 | hypothetical protein | - |
| AM342_RS26605 () | 37737..38870 | - | 1134 | WP_000545983.1 | DUF3800 domain-containing protein | - |
| AM342_RS26610 () | 39133..42252 | - | 3120 | WP_023909028.1 | hypothetical protein | - |
| AM342_RS26620 () | 42559..42789 | + | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| AM342_RS26625 () | 42786..43202 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| AM342_RS26630 () | 43364..45502 | - | 2139 | WP_000350635.1 | AAA family ATPase | - |
| AM342_RS26635 () | 45967..46962 | + | 996 | WP_000246636.1 | hypothetical protein | - |
| AM342_RS26640 () | 46966..47898 | + | 933 | WP_000991832.1 | hypothetical protein | - |
| AM342_RS26645 () | 48035..48732 | - | 698 | Protein_53 | IS1 family transposase | - |
| AM342_RS26655 () | 48946..52062 | - | 3117 | WP_031311986.1 | HsdR family type I site-specific deoxyribonuclease | - |
| AM342_RS26660 () | 52184..53467 | - | 1284 | WP_001617890.1 | restriction endonuclease subunit S | - |
| AM342_RS26665 () | 53464..55020 | - | 1557 | WP_001553856.1 | type I restriction-modification system subunit M | - |
| AM342_RS26670 () | 55203..55424 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| AM342_RS26675 () | 55424..55804 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| AM342_RS26680 () | 55809..55988 | + | 180 | WP_001513661.1 | hypothetical protein | - |
| AM342_RS26685 () | 56016..56375 | + | 360 | WP_001513660.1 | hypothetical protein | - |
| AM342_RS26690 () | 56299..56712 | + | 414 | Protein_61 | DDE-type integrase/transposase/recombinase | - |
| AM342_RS26700 () | 57508..58485 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| AM342_RS26705 () | 58770..59510 | - | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| AM342_RS26710 () | 59631..59813 | - | 183 | WP_042065278.1 | hypothetical protein | - |
| AM342_RS26720 () | 60156..60463 | - | 308 | Protein_65 | type II toxin-antitoxin system ParD family antitoxin | - |
| AM342_RS26730 () | 60956..62125 | + | 1170 | WP_001072355.1 | hypothetical protein | - |
| AM342_RS26735 () | 62158..62286 | + | 129 | Protein_67 | IS481 family transposase | - |
| AM342_RS26740 () | 62321..62515 | - | 195 | WP_086258557.1 | hypothetical protein | - |
| AM342_RS26750 () | 62557..63254 | + | 698 | Protein_69 | IS1 family transposase | - |
| AM342_RS26755 () | 63270..63389 | + | 120 | Protein_70 | ArsR family transcriptional regulator | - |
| AM342_RS26760 () | 63367..63990 | - | 624 | WP_000088605.1 | tetracycline resistance transcriptional repressor TetR(B) | - |
| AM342_RS26765 () | 64072..65277 | + | 1206 | WP_001089068.1 | tetracycline efflux MFS transporter Tet(B) | - |
| AM342_RS26770 () | 65390..65983 | - | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| AM342_RS26775 () | 66116..66487 | + | 372 | WP_035689358.1 | helix-turn-helix domain-containing protein | - |
| AM342_RS26780 () | 66497..67018 | - | 522 | Protein_75 | IS4 family transposase | - |
| AM342_RS26785 () | 67025..67213 | - | 189 | Protein_76 | IS1 family transposase | - |
| AM342_RS26790 () | 67278..67982 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| AM342_RS26795 () | 68037..68582 | - | 546 | Protein_78 | class 1 integron integrase IntI1 | - |
| AM342_RS26800 () | 68740..69213 | + | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| AM342_RS26805 () | 69344..70132 | + | 789 | WP_000503573.1 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA5 | - |
| AM342_RS26810 () | 70338..70685 | + | 348 | WP_000679427.1 | quaternary ammonium compound efflux SMR transporter QacE delta 1 | - |
| AM342_RS26815 () | 70679..71518 | + | 840 | WP_000259031.1 | sulfonamide-resistant dihydropteroate synthase Sul1 | - |
| AM342_RS26825 () | 71646..71849 | + | 204 | WP_000376616.1 | hypothetical protein | - |
| AM342_RS26830 () | 72005..72370 | + | 366 | Protein_84 | chromate transporter | - |
| AM342_RS26835 () | 72424..73128 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| AM342_RS26840 () | 73189..73572 | + | 384 | Protein_86 | class 1 integron integrase IntI1 | - |
| AM342_RS26845 () | 73638..74342 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| AM342_RS26850 () | 74408..74920 | + | 513 | Protein_88 | Tn3 family transposase | - |
| AM342_RS26855 () | 74944..75477 | - | 534 | WP_100190806.1 | recombinase family protein | - |
| AM342_RS26860 () | 75502..76206 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| AM342_RS26865 () | 76272..76655 | - | 384 | Protein_91 | class 1 integron integrase IntI1 | - |
| AM342_RS26870 () | 76716..77420 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| AM342_RS26875 () | 77475..78020 | - | 546 | Protein_93 | class 1 integron integrase IntI1 | - |
| AM342_RS26880 () | 78178..78651 | + | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| AM342_RS26885 () | 78782..79570 | + | 789 | WP_000503573.1 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA5 | - |
| AM342_RS26890 () | 79776..80123 | + | 348 | WP_000679427.1 | quaternary ammonium compound efflux SMR transporter QacE delta 1 | - |
| AM342_RS26895 () | 80117..80956 | + | 840 | WP_000259031.1 | sulfonamide-resistant dihydropteroate synthase Sul1 | - |
| AM342_RS26905 () | 81084..81287 | + | 204 | WP_000376616.1 | hypothetical protein | - |
| AM342_RS26910 () | 81443..81808 | + | 366 | Protein_99 | chromate transporter | - |
| AM342_RS26915 () | 81862..82566 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| AM342_RS26920 () | 82627..83010 | + | 384 | Protein_101 | class 1 integron integrase IntI1 | - |
| AM342_RS26925 () | 83076..83780 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| AM342_RS26930 () | 83805..84338 | + | 534 | WP_100190806.1 | recombinase family protein | - |
| AM342_RS26935 () | 84362..84874 | - | 513 | Protein_104 | Tn3 family transposase | - |
| AM342_RS26940 () | 84940..85644 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| AM342_RS26945 () | 85788..86342 | + | 555 | WP_063840321.1 | fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5 | - |
| AM342_RS26950 () | 86473..87303 | + | 831 | WP_001334766.1 | oxacillin-hydrolyzing class D beta-lactamase OXA-1 | - |
| AM342_RS26955 () | 87441..87881 | + | 441 | Protein_108 | CatB-related O-acetyltransferase | - |
| AM342_RS26960 () | 87935..88639 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| AM342_RS26965 () | 88704..90947 | - | 2244 | Protein_110 | Tn3-like element Tn3 family transposase | - |
| AM342_RS26970 () | 90961..91293 | + | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| AM342_RS26975 () | 91340..92215 | - | 876 | WP_000239590.1 | class A extended-spectrum beta-lactamase CTX-M-15 | - |
| AM342_RS26985 () | 92525..93229 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| AM342_RS26990 () | 93293..93631 | + | 339 | Protein_114 | recombinase family protein | - |
| AM342_RS26995 () | 93814..94674 | + | 861 | WP_000027057.1 | class A broad-spectrum beta-lactamase TEM-1 | - |
| AM342_RS27000 () | 94821..95102 | + | 282 | Protein_116 | transposase zinc-binding domain-containing protein | - |
| AM342_RS27005 () | 95261..95965 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| AM342_RS27015 () | 96087..96992 | + | 906 | WP_000219391.1 | Mph(A) family macrolide 2'-phosphotransferase | - |
| AM342_RS27020 () | 96989..98227 | + | 1239 | WP_000004159.1 | MFS transporter | - |
| AM342_RS27025 () | 98227..98811 | + | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| AM342_RS27040 () | 99304..100068 | - | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| AM342_RS27045 () | 100208..100912 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| AM342_RS27050 () | 100973..101809 | - | 837 | WP_100190804.1 | APH(6)-I family aminoglycoside O-phosphotransferase | - |
| AM342_RS27055 () | 101809..102612 | - | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| AM342_RS27060 () | 102673..103488 | - | 816 | WP_001043265.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| AM342_RS27070 () | 103796..104647 | - | 852 | WP_000240536.1 | replication protein | - |
| AM342_RS27075 () | 104634..105353 | - | 720 | Protein_127 | AAA family ATPase | - |
| AM342_RS27085 () | 105403..106107 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| AM342_RS27090 () | 106171..106842 | + | 672 | Protein_129 | Tn3 family transposase | - |
| AM342_RS27095 () | 107067..107708 | - | 642 | WP_000134999.1 | MBL fold metallo-hydrolase | - |
| AM342_RS27100 () | 107948..108268 | - | 321 | Protein_131 | IS1380 family transposase | - |
| AM342_RS27105 () | 108281..108841 | + | 561 | WP_000147567.1 | recombinase family protein | - |
| AM342_RS27110 () | 108844..111315 | + | 2472 | Protein_133 | Tn3-like element TnAs3 family transposase | - |
| AM342_RS27115 () | 111462..112322 | - | 861 | WP_000027057.1 | class A broad-spectrum beta-lactamase TEM-1 | - |
| AM342_RS27120 () | 112405..113109 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| AM342_RS27125 () | 113164..114009 | - | 846 | Protein_136 | IS4-like element ISVsa5 family transposase | - |
| AM342_RS27130 () | 114119..115081 | - | 963 | Protein_137 | IS4-like element ISVsa5 family transposase | - |
| AM342_RS27135 () | 115191..116153 | - | 963 | Protein_138 | IS4-like element ISVsa5 family transposase | - |
| AM342_RS27145 () | 116296..117156 | + | 861 | WP_000557454.1 | aminoglycoside N-acetyltransferase AAC(3)-IId | - |
| AM342_RS27150 () | 117169..117711 | + | 543 | WP_000587837.1 | AAA family ATPase | - |
| AM342_RS27155 () | 118193..118384 | - | 192 | WP_000951934.1 | hypothetical protein | - |
| AM342_RS27160 () | 118408..118635 | + | 228 | WP_000248278.1 | hypothetical protein | - |
| AM342_RS27165 () | 118686..119813 | + | 1128 | WP_014837927.1 | DUF3883 domain-containing protein | - |
| AM342_RS27170 () | 119850..120554 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| AM342_RS27180 () | 120609..120725 | - | 117 | Protein_145 | recombinase family protein | - |
| AM342_RS27185 () | 120820..123717 | + | 2898 | WP_001553819.1 | Tn3-like element Tn5403 family transposase | - |
| AM342_RS27190 () | 123854..124255 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| AM342_RS28480 () | 124188..124445 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| AM342_RS27195 () | 124538..125191 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| AM342_RS27205 () | 126131..126988 | - | 858 | WP_000130640.1 | incFII family plasmid replication initiator RepA | - |
| AM342_RS27210 () | 126981..127055 | - | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| AM342_RS28650 () | 127052..127186 | - | 135 | Protein_152 | protein CopA/IncA | - |
| AM342_RS27220 () | 127417..128958 | + | 1542 | WP_002431311.1 | IS21-like element ISEc12 family transposase | - |
| AM342_RS27225 () | 128973..129719 | + | 747 | WP_001016257.1 | IS21-like element ISEc12 family helper ATPase IstB | - |
| AM342_RS27230 () | 129879..130133 | - | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| AM342_RS27235 () | 130430..130564 | - | 135 | WP_023144756.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 130609..130669 | + | 61 | NuclAT_2 | - | Antitoxin Detail |
| - () | 130609..130669 | + | 61 | NuclAT_2 | - | Antitoxin Detail |
| - () | 130609..130669 | + | 61 | NuclAT_2 | - | Antitoxin Detail |
| - () | 130609..130669 | + | 61 | NuclAT_2 | - | Antitoxin Detail |
| AM342_RS28655 () | 130636..130922 | - | 287 | Protein_157 | DUF2726 domain-containing protein | - |
| AM342_RS27250 () | 131435..131647 | - | 213 | WP_013023861.1 | hypothetical protein | - |
| AM342_RS27255 () | 131778..132338 | - | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| AM342_RS27260 () | 132393..133139 | - | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| AM342_RS27265 () | 133159..138339 | - | 5181 | WP_074168427.1 | conjugative transfer relaxase/helicase TraI | - |
| AM342_RS27270 () | 138323..138496 | - | 174 | Protein_162 | type IV secretion system DNA-binding domain-containing protein | - |
| AM342_RS27275 () | 138495..138659 | - | 165 | Protein_163 | TraU family protein | - |
| AM342_RS27280 () | 138656..139000 | - | 345 | Protein_164 | conjugal transfer protein TraW | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|