NZ_CP0248561..181436

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 181436 bp
Accession: NZ_CP024856        Location: 1..181436         Organism: Escherichia coli strain AR_0011       Replicon: plasmid tig00001011_pilon


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
AM338_RS24850 () 188..919 - 732 WP_000850424.1 complement resistance protein TraT -
AM338_RS24855 () 933..1442 - 510 WP_000628100.1 conjugal transfer entry exclusion protein TraS -
AM338_RS24860 () 1439..4264 - 2826 WP_001553826.1 conjugal transfer mating pair stabilization protein TraG -
AM338_RS24865 () 4261..5634 - 1374 WP_021518370.1 conjugal transfer protein TraH -
AM338_RS24870 () 5621..6013 - 393 WP_000164675.1 F-type conjugal transfer protein TrbF -
AM338_RS24875 () 5967..6341 - 375 WP_071788165.1 P-type conjugative transfer protein TrbJ -
AM338_RS24880 () 6271..6825 - 555 WP_001553830.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
AM338_RS24885 () 6812..7096 - 285 WP_000624105.1 type-F conjugative transfer system pilin chaperone TraQ -
AM338_RS24890 () 7177..7512 + 336 WP_000415571.1 hypothetical protein -
AM338_RS24895 () 7493..7834 - 342 WP_000556794.1 conjugal transfer protein TrbA -
AM338_RS24900 () 7848..8591 - 744 WP_001030378.1 type-F conjugative transfer system pilin assembly protein TraF -
AM338_RS24905 () 8584..8841 - 258 WP_000864312.1 conjugal transfer protein TrbE -
AM338_RS24910 () 8868..10676 - 1809 WP_000821840.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
AM338_RS24915 () 10673..11311 - 639 WP_021518374.1 type-F conjugative transfer system pilin assembly protein TrbC -
AM338_RS24920 () 11320..12312 - 993 WP_000830180.1 conjugal transfer pilus assembly protein TraU -
AM338_RS24925 () 12309..12941 - 633 WP_001203720.1 type-F conjugative transfer system protein TraW -
AM338_RS24930 () 12938..13324 - 387 WP_000099686.1 type-F conjugative transfer system protein TrbI -
AM338_RS24935 () 13321..15948 - 2628 WP_001064245.1 type IV secretion system protein TraC -
AM338_RS24940 () 16108..16329 - 222 WP_001278689.1 conjugal transfer protein TraR -
AM338_RS24945 () 16464..16979 - 516 WP_000809838.1 type IV conjugative transfer system lipoprotein TraV -
AM338_RS24950 () 16976..17227 - 252 WP_001038342.1 conjugal transfer protein TrbG -
AM338_RS24955 () 17239..17469 - 231 WP_001352845.1 conjugal transfer protein TrbD -
AM338_RS24960 () 17423..18013 - 591 WP_000002787.1 conjugal transfer protein TraP -
AM338_RS24965 () 18003..19430 - 1428 WP_000146685.1 conjugal transfer protein TraB -
AM338_RS24970 () 19430..20134 - 705 WP_072095570.1 type-F conjugative transfer system secretin TraK -
AM338_RS24975 () 20145..20711 - 567 WP_000399792.1 type IV conjugative transfer system protein TraE -
AM338_RS24980 () 20733..21044 - 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
AM338_RS24985 () 21059..21424 - 366 WP_000994779.1 type IV conjugative transfer system pilin TraA -
AM338_RS24990 () 21457..21852 - 396 WP_001309237.1 conjugal transfer relaxosome protein TraY -
AM338_RS24995 () 21951..22640 - 690 WP_000283385.1 conjugal transfer transcriptional regulator TraJ -
AM338_RS25000 () 22827..23210 - 384 WP_001151524.1 relaxosome protein TraM -
AM338_RS25005 () 23531..24133 + 603 WP_013362798.1 hypothetical protein VF
AM338_RS25010 () 24430..25251 - 822 WP_001234426.1 DUF945 domain-containing protein -
AM338_RS25015 () 25369..25656 - 288 WP_000107535.1 hypothetical protein -
AM338_RS25030 () 26577..26735 - 159 WP_001312861.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
- () 26779..26810 - 32 NuclAT_1 - Antitoxin Detail
- () 26779..26810 - 32 NuclAT_1 - Antitoxin Detail
- () 26779..26810 - 32 NuclAT_1 - Antitoxin Detail
- () 26779..26810 - 32 NuclAT_1 - Antitoxin Detail
- () 28250..28352 - 103 NuclAT_0 - -
- () 28250..28352 - 103 NuclAT_0 - -
- () 28250..28352 - 103 NuclAT_0 - -
- () 28250..28352 - 103 NuclAT_0 - -
AM338_RS25040 () 28364..29083 - 720 WP_001276238.1 plasmid SOS inhibition protein A -
AM338_RS25045 () 29080..29514 - 435 WP_000845937.1 conjugation system SOS inhibitor PsiB -
AM338_RS25050 () 29569..29766 - 198 Protein_38 hypothetical protein -
AM338_RS25055 () 29794..30027 - 234 WP_000005990.1 DUF905 family protein -
AM338_RS25060 () 30095..30634 - 540 WP_000290840.1 single-stranded DNA-binding protein -
AM338_RS27400 () 30660..30866 - 207 WP_000275856.1 hypothetical protein -
AM338_RS25075 () 31276..31494 - 219 WP_001496291.1 hypothetical protein -
AM338_RS25080 () 31520..32085 - 566 Protein_43 class I SAM-dependent methyltransferase -
AM338_RS25085 () 32133..33494 - 1362 WP_000199439.1 DUF3560 domain-containing protein -
AM338_RS25090 () 33546..33776 - 231 WP_000218642.1 hypothetical protein -
AM338_RS25100 () 34288..34536 + 249 WP_071781657.1 hypothetical protein -
AM338_RS25105 () 34808..34999 - 192 WP_001027495.1 hypothetical protein -
AM338_RS25110 () 34996..35418 - 423 WP_000271685.1 DUF1380 family protein -
AM338_RS25115 () 35465..35767 - 303 WP_001666994.1 antirestriction protein -
AM338_RS27175 () 36304..37074 - 771 WP_001006251.1 hypothetical protein -
AM338_RS25130 () 37119..37553 - 435 WP_001546462.1 DUF1380 family protein -
AM338_RS25135 () 37567..37788 - 222 WP_001104873.1 hypothetical protein -
AM338_RS25140 () 37789..38472 - 684 WP_032181561.1 DNA methylase -
AM338_RS25145 () 38549..38853 - 305 Protein_54 hypothetical protein -
AM338_RS25150 () 38857..39759 - 903 WP_064766247.1 DUF1281 domain-containing protein -
AM338_RS25160 () 40497..41468 - 972 WP_000817031.1 ParB/RepB/Spo0J family plasmid partition protein -
AM338_RS25165 () 41468..42634 - 1167 WP_000772446.1 Sporulation initiation inhibitor protein Soj VF
AM338_RS25170 () 43222..43977 - 756 WP_000852146.1 replication initiation protein RepE -
AM338_RS25175 () 44699..45505 - 807 WP_000016970.1 site-specific integrase -
AM338_RS25180 () 45506..45811 - 306 WP_001159871.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
AM338_RS25185 () 45813..46031 - 219 WP_000813630.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
AM338_RS25195 () 46591..46821 + 231 WP_001261286.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Antitoxin Detail
AM338_RS25200 () 46818..47234 + 417 WP_001034044.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
AM338_RS25205 () 47309..48874 + 1566 WP_001128474.1 AAA family ATPase -
AM338_RS25210 () 48859..49881 + 1023 WP_000361402.1 helicase UvrD -
AM338_RS25220 () 50135..50821 - 687 Protein_66 IS1 family transposase IS1S Transposase
AM338_RS25235 () 51347..53548 - 2202 WP_000973519.1 Ferric aerobactin receptor VF
AM338_RS25240 () 53630..54907 - 1278 WP_000750130.1 L-lysine N6-monooxygenase VF
AM338_RS25245 () 54904..56646 - 1743 WP_001015721.1 Aerobactin synthase VF
AM338_RS25250 () 56646..57593 - 948 WP_000011908.1 N(6)-hydroxylysine O-acetyltransferase VF
AM338_RS25255 () 57594..59318 - 1725 WP_044068371.1 N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase VF
AM338_RS25260 () 59454..60647 + 1194 WP_000095526.1 MFS transporter -
AM338_RS25265 () 61027..61407 - 381 WP_001318207.1 fluoride efflux transporter CrcB -
AM338_RS25275 () 61748..62161 - 414 Protein_74 phosphopyruvate hydratase -
AM338_RS25280 () 62159..62416 + 258 Protein_75 Tn3 family transposase -
AM338_RS25285 () 62650..63507 - 858 WP_000968139.1 Manganese transport system membrane protein MntB ARG
AM338_RS25290 () 63504..64361 - 858 WP_001101723.1 Manganese transport system membrane protein MntB ARG
AM338_RS25295 () 64358..65185 - 828 WP_000983710.1 Iron(3+)-hydroxamate import ATP-binding protein FhuC VF
AM338_RS25300 () 65185..66099 - 915 WP_000949005.1 Putative metal ABC transporter substrate-binding protein Hpf VF
AM338_RS25315 () 66455..67152 + 698 Protein_80 IS1 family transposase IS1G Transposase
AM338_RS25320 () 67332..67845 - 514 Protein_81 DUF4113 domain-containing protein -
AM338_RS27405 () 67906..68010 - 105 Protein_82 AAA family ATPase -
AM338_RS25330 () 68012..68335 - 324 Protein_83 IS21 family transposase IS21 Transposase
AM338_RS25340 () 69081..70058 + 978 WP_000361611.1 RepB family plasmid replication initiator protein -
AM338_RS25345 () 70343..71083 - 741 WP_001066953.1 tyrosine-type recombinase/integrase -
AM338_RS25350 () 71204..71392 - 189 WP_001309252.1 hypothetical protein -
AM338_RS25355 () 71759..72928 + 1170 WP_001072358.1 hypothetical protein -
AM338_RS25360 () 73154..73329 - 176 Protein_88 IS3 family transposase -
AM338_RS25365 () 73775..74047 - 273 WP_001322642.1 adhesin biosynthesis transcription regulatory family protein -
AM338_RS25370 () 74572..75008 - 437 Protein_90 IS3 family transposase IS2 Transposase
AM338_RS25375 () 75290..77260 + 1971 WP_001496335.1 Hemin receptor VF
AM338_RS25380 () 77267..78058 + 792 WP_000977394.1 DUF4198 domain-containing protein -
AM338_RS25385 () 78121..78729 - 609 Protein_93 IS66 family transposase ISEc22 Transposase
AM338_RS25390 () 78797..79579 - 783 WP_001317493.1 IS21 family transposase IS100kyp Transposase
AM338_RS25395 () 79576..80598 - 1023 WP_000255956.1 IS21 family transposase IS100kyp Transposase
AM338_RS25405 () 80684..81629 - 946 Protein_96 IS66 family transposase ISEc8 Transposase
AM338_RS25410 () 81678..82052 - 375 WP_024193849.1 IS66 family transposase ISKpn24 Transposase
AM338_RS25415 () 82077..82781 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
AM338_RS25420 () 82925..83479 + 555 WP_063840321.1 Aminoglycoside N(6')-acetyltransferase type 1 ARG
AM338_RS25425 () 83610..84440 + 831 WP_001334766.1 Beta-lactamase OXA-1 ARG
AM338_RS25430 () 84578..85018 + 441 Protein_101 CatB-related O-acetyltransferase -
AM338_RS25435 () 85072..85776 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
AM338_RS25440 () 85883..86743 + 861 WP_000557452.1 SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD ARG
AM338_RS25445 () 86756..87298 + 543 WP_002063889.1 AAA family ATPase -
AM338_RS25450 () 87390..88438 + 1049 Protein_105 IS3 family transposase ISKpn11 Transposase
AM338_RS25455 () 88492..89196 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
AM338_RS25460 () 89261..91504 - 2244 Protein_107 Tn3 family transposase TnpA_Tn3 Transposase
AM338_RS25465 () 91518..91850 + 333 WP_001393253.1 WbuC family cupin fold metalloprotein -
AM338_RS25470 () 91897..92772 - 876 WP_000239590.1 Beta-lactamase CTX-M-1 ARG
AM338_RS25475 () 93028..94290 - 1263 WP_000608644.1 IS1380 family transposase ISEcp1 Transposase
AM338_RS25480 () 94472..94627 - 156 WP_100183791.1 DUF4158 domain-containing protein -
AM338_RS25485 () 94686..95390 + 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
AM338_RS25490 () 95424..96299 - 876 Protein_113 IS4 family transposase IS10R Transposase
AM338_RS25495 () 96314..97011 - 698 Protein_114 IS1 family transposase IS1R Transposase
AM338_RS27590 () 97211..97324 + 114 Protein_115 IS6 family transposase -
AM338_RS25515 () 97474..97632 + 159 WP_000449408.1 DsbA family protein -
AM338_RS25520 () 97622..98128 + 507 WP_000949452.1 protein disulfide oxidoreductase -
AM338_RS25525 () 98311..99126 + 816 WP_012372823.1 Na(+)-translocating NADH-quinone reductase subunit C -
AM338_RS25535 () 99473..101359 + 1887 WP_000118029.1 FTR1 family iron permease -
AM338_RS25540 () 101400..101927 + 528 WP_000178050.1 iron transporter -
AM338_RS25545 () 102031..103410 + 1380 WP_000119836.1 DUF2318 domain-containing protein -
AM338_RS25550 () 103413..104696 + 1284 WP_000964653.1 ABC transporter permease -
AM338_RS25555 () 104686..105816 + 1131 WP_000729219.1 ABC transporter permease -
AM338_RS25560 () 105821..106516 + 696 WP_000117262.1 Lipoprotein-releasing system ATP-binding protein LolD VF
AM338_RS25565 () 106503..106988 + 486 WP_001267176.1 TlpA family protein disulfide reductase -
AM338_RS25570 () 107013..107498 + 486 WP_000874189.1 hypothetical protein -
AM338_RS25575 () 107620..108252 + 633 Protein_127 histidine-type phosphatase -
AM338_RS25580 () 108402..108506 - 105 Protein_128 IS5/IS1182 family transposase -
AM338_RS25585 () 108540..110954 - 2415 Protein_129 Tn3 family transposase TnpA_ISSba14 Transposase
AM338_RS25590 () 111012..111716 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
AM338_RS25595 () 111785..112189 - 405 WP_000839179.1 IS66 family transposase ISEc22 Transposase
AM338_RS25600 () 112218..112601 - 384 Protein_132 IS3 family transposase IS629 Transposase
AM338_RS25605 () 112691..114199 - 1509 WP_001189123.1 group II intron reverse transcriptase/maturase -
AM338_RS25615 () 114872..115611 - 740 Protein_134 IS3 family transposase IS629 Transposase
AM338_RS25620 () 115713..115973 + 261 WP_000371882.1 hypothetical protein -
AM338_RS25625 () 115970..116539 + 570 WP_000194541.1 hypothetical protein -
AM338_RS25630 () 116559..116906 - 348 WP_000142452.1 hypothetical protein -
AM338_RS25640 () 117035..117370 + 336 WP_001080732.1 colicin transporter -
AM338_RS25660 () 118822..119508 + 687 Protein_139 primase alpha helix C-terminal domain-containing protein -
AM338_RS25665 () 119840..120715 + 876 WP_001224623.1 ChaN family lipoprotein -
AM338_RS25670 () 120723..121499 + 777 WP_000981091.1 energy transducer TonB -
AM338_RS25675 () 121668..123929 + 2262 WP_001100763.1 TonB-dependent receptor -
AM338_RS25680 () 123998..125173 + 1176 WP_001020413.1 putative protein YncE VF
AM338_RS25690 () 125696..126001 - 306 Protein_144 IS91 family transposase ISSbo1 Transposase
AM338_RS25695 () 126027..126766 + 740 Protein_145 IS3 family transposase IS629 Transposase
AM338_RS25705 () 127439..128947 + 1509 WP_001189123.1 group II intron reverse transcriptase/maturase -
AM338_RS25710 () 129037..129510 + 474 Protein_147 IS3 family transposase IS629 Transposase
AM338_RS25715 () 129513..130082 - 570 WP_001336919.1 Serine protease EspC VF
AM338_RS25720 () 130184..131100 + 917 Protein_149 IS5 family transposase ISKpn26 Transposase
AM338_RS25725 () 131118..131431 - 314 Protein_150 Tn3 family transposase -
AM338_RS25730 () 131458..132210 - 753 WP_000734115.1 alpha/beta hydrolase -
AM338_RS25735 () 132452..133324 + 873 WP_000090196.1 DMT family transporter -
AM338_RS25740 () 133455..134678 + 1224 WP_000872613.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
AM338_RS25745 () 134864..135637 - 774 WP_032152933.1 SDR family oxidoreductase -
AM338_RS25750 () 135703..136404 - 702 WP_001194013.1 DsbA family oxidoreductase -
AM338_RS25755 () 136470..137576 - 1107 WP_000039982.1 alkene reductase -
AM338_RS25760 () 137790..138119 + 330 WP_002431133.1 thioredoxin family protein -
AM338_RS25765 () 138149..138487 - 339 WP_000888080.1 carboxymuconolactone decarboxylase family protein -
AM338_RS25770 () 138492..139073 - 582 WP_000210409.1 HTH-type transcriptional repressor NemR VF
AM338_RS25775 () 139215..139772 - 558 WP_000108589.1 OsmC family protein -
AM338_RS25780 () 139957..140436 - 480 Protein_161 Tn3 family transposase TnpR_ISSba14 Transposase
AM338_RS25785 () 140489..141193 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
AM338_RS25790 () 141259..142773 + 1515 Protein_163 Tn3 family transposase TnpA_TnAs1 Transposase
AM338_RS25795 () 142815..143057 + 243 WP_032140899.1 hypothetical protein -
AM338_RS25800 () 143089..143739 - 651 WP_000164043.1 tetracycline resistance transcriptional repressor TetR(A) -
AM338_RS25805 () 143845..145044 + 1200 WP_000804064.1 Tetracycline resistance protein, class C ARG
AM338_RS25810 () 145076..145960 - 885 WP_000058717.1 EamA family transporter -
AM338_RS25815 () 146098..146505 - 408 WP_001214976.1 cysteine hydrolase -
AM338_RS25820 () 146494..147243 + 750 Protein_169 Tn3 family transposase TnpA_TnAs1 Transposase
AM338_RS25825 () 147267..147872 - 606 WP_000509965.1 Tn3 family transposase TnpR_Tn5403 Transposase
AM338_RS25830 () 147967..150864 + 2898 WP_001553819.1 Tn3 family transposase TnpA_Tn5403 Transposase
AM338_RS25835 () 151001..151402 - 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
AM338_RS27180 () 151335..151592 - 258 WP_000557619.1 type II toxin-antitoxin system antitoxin PemI -
AM338_RS25840 () 151685..152338 - 654 WP_000616807.1 CPBP family intramembrane metalloprotease -
AM338_RS25850 () 153277..154134 - 858 WP_032152935.1 incFII family plasmid replication initiator RepA -
AM338_RS25855 () 154127..154201 - 75 WP_001365705.1 RepA leader peptide Tap -
AM338_RS25865 () 154436..154693 - 258 WP_000083821.1 replication regulatory protein RepA -
AM338_RS25870 () 155098..156120 + 1023 WP_000156883.1 IS110 family transposase ISSm1 Transposase
AM338_RS25875 () 156592..156945 + 354 WP_000005489.1 hypothetical protein -
AM338_RS25880 () 157358..157936 - 579 WP_032152936.1 DUF2726 domain-containing protein -
AM338_RS25890 () 157969..158666 + 698 Protein_181 IS1 family transposase IS1S Transposase
AM338_RS25895 () 158775..159137 + 363 WP_059330006.1 IS66 family insertion sequence hypothetical protein -
AM338_RS25900 () 159134..159484 + 351 WP_000624725.1 IS66 family transposase ISEc47 Transposase
AM338_RS25905 () 159515..159736 + 222 WP_000080227.1 hypothetical protein -
AM338_RS25910 () 159688..160029 + 342 Protein_185 transposase -
AM338_RS25915 () 160093..160572 - 480 WP_001496175.1 ArgR family transcriptional regulator -
AM338_RS25920 () 160653..162056 - 1404 WP_000514417.1 YfcC family protein -
AM338_RS25925 () 162104..163108 - 1005 WP_000154545.1 Ornithine carbamoyltransferase VF
AM338_RS25930 () 163193..164104 - 912 WP_000440183.1 carbamate kinase -
AM338_RS25935 () 164115..165335 - 1221 WP_000410951.1 arginine deiminase -
AM338_RS25940 () 166228..166710 + 483 Protein_191 VENN motif pre-toxin domain-containing protein -
AM338_RS25945 () 166656..167102 - 447 Protein_192 incFII family plasmid replication initiator RepA -
AM338_RS25950 () 167095..167169 - 75 WP_032336874.1 RepA leader peptide Tap -
AM338_RS25960 () 167405..167662 - 258 WP_000083833.1 replication regulatory protein RepA -
AM338_RS25965 () 167946..168152 - 207 WP_015387399.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
- () 168139..168200 + 62 NuclAT_2 - Antitoxin Detail
- () 168139..168200 + 62 NuclAT_2 - Antitoxin Detail
- () 168139..168200 + 62 NuclAT_2 - Antitoxin Detail
- () 168139..168200 + 62 NuclAT_2 - Antitoxin Detail
AM338_RS25975 () 168339..168521 - 183 WP_000968309.1 hypothetical protein -
AM338_RS25985 () 168622..169238 + 617 Protein_197 IS1 family transposase IS1G Transposase
AM338_RS25990 () 169276..170847 - 1572 WP_023149734.1 IS66 family transposase ISCro1 Transposase
AM338_RS25995 () 170867..171214 - 348 WP_000624622.1 IS66 family transposase ISCro1 Transposase
AM338_RS26000 () 171214..171891 - 678 WP_001339397.1 IS66 family transposase ISCro1 Transposase
AM338_RS27410 () 171946..172035 + 90 Protein_201 IS1 family transposase -
AM338_RS26015 () 172336..172548 - 213 WP_005012601.1 hypothetical protein -
AM338_RS26020 () 172682..173242 - 561 WP_000139363.1 fertility inhibition protein FinO -
AM338_RS26025 () 173297..174043 - 747 WP_023149624.1 conjugal transfer pilus acetylase TraX -
AM338_RS26030 () 174063..179183 - 5121 WP_013362805.1 Multifunctional conjugation protein TraI Relaxase
AM338_RS26035 () 179183..181372 - 2190 WP_040110343.1 type IV conjugative transfer system coupling protein TraD -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance