MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 138289 bp
Accession: NZ_CP024248 Location: 1..138289 Organism: Escherichia coli O27:H7 strain B4103-1 Replicon: plasmid unnamed3
Accession: NZ_CP024248 Location: 1..138289 Organism: Escherichia coli O27:H7 strain B4103-1 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CQS47_RS24960 () | 191..837 | - | 647 | Protein_0 | IS630 family transposase | - |
| CQS47_RS24965 () | 838..1239 | + | 402 | Protein_1 | IS91 family transposase | - |
| CQS47_RS24980 () | 2102..2959 | - | 858 | WP_001401515.1 | incFII family plasmid replication initiator RepA | - |
| CQS47_RS24985 () | 2952..3026 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| CQS47_RS24995 () | 3252..3512 | - | 261 | WP_000083817.1 | replication regulatory protein RepA | - |
| CQS47_RS25000 () | 3796..4002 | - | 207 | WP_001362723.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 3994..4050 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 3994..4050 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 3994..4050 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 3994..4050 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| CQS47_RS25010 () | 4294..4476 | + | 183 | WP_001393357.1 | hypothetical protein | - |
| CQS47_RS25015 () | 4700..5431 | - | 732 | WP_001595201.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| CQS47_RS25020 () | 5428..5993 | - | 566 | Protein_8 | DUF2726 domain-containing protein | - |
| CQS47_RS25025 () | 6011..7207 | - | 1197 | WP_024191432.1 | conjugal transfer protein TraI | - |
| CQS47_RS25030 () | 7303..7551 | + | 249 | Protein_10 | transposase | - |
| CQS47_RS25035 () | 7616..8767 | + | 1152 | WP_001595195.1 | IS30-like element IS30 family transposase | - |
| CQS47_RS26455 () | 8848..9003 | + | 156 | WP_000074142.1 | hypothetical protein | - |
| CQS47_RS25040 () | 9052..9294 | + | 243 | Protein_13 | hypothetical protein | - |
| CQS47_RS25045 () | 9249..9674 | - | 426 | WP_157774462.1 | IS3 family transposase | - |
| CQS47_RS25050 () | 9734..10222 | - | 489 | WP_001595191.1 | helix-turn-helix domain-containing protein | - |
| CQS47_RS25055 () | 10346..10495 | - | 150 | Protein_16 | transposase | - |
| CQS47_RS25060 () | 11003..11221 | + | 219 | WP_001595189.1 | heat-stable enterotoxin ST-I group a | - |
| CQS47_RS25070 () | 11515..11931 | + | 417 | Protein_18 | IS66 family transposase | - |
| CQS47_RS25080 () | 12041..13092 | - | 1052 | Protein_19 | IS21 family transposase | - |
| CQS47_RS25085 () | 13301..13869 | - | 569 | Protein_20 | transposase zinc-binding domain-containing protein | - |
| CQS47_RS25090 () | 13869..14198 | - | 330 | WP_064754141.1 | hypothetical protein | - |
| CQS47_RS25095 () | 14248..15410 | + | 1163 | WP_085947598.1 | IS3-like element IS3 family transposase | - |
| CQS47_RS25110 () | 15927..16283 | + | 357 | WP_071600075.1 | hypothetical protein | - |
| CQS47_RS25120 () | 16557..17455 | + | 899 | Protein_24 | IS3 family transposase | - |
| CQS47_RS26460 () | 17457..18822 | + | 1366 | Protein_25 | IS66 family transposase | - |
| CQS47_RS25130 () | 18964..20577 | - | 1614 | WP_099590316.1 | IS66 family transposase | - |
| CQS47_RS25135 () | 20608..20958 | - | 351 | WP_000624720.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| CQS47_RS25140 () | 20955..21380 | - | 426 | WP_000436083.1 | IS66 family insertion sequence hypothetical protein | - |
| CQS47_RS25145 () | 21469..21612 | - | 144 | Protein_29 | transposase | - |
| CQS47_RS25150 () | 21623..21895 | - | 273 | Protein_30 | IS66 family transposase | - |
| CQS47_RS25155 () | 21926..22276 | - | 351 | WP_001464094.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| CQS47_RS25160 () | 22273..22707 | - | 435 | WP_001309734.1 | IS66 family insertion sequence hypothetical protein | - |
| CQS47_RS25170 () | 22969..23108 | + | 140 | Protein_33 | IS91 family transposase | - |
| CQS47_RS26465 () | 23305..23454 | - | 150 | WP_001424616.1 | hypothetical protein | - |
| CQS47_RS25175 () | 23824..25068 | - | 1245 | WP_024191431.1 | hypothetical protein | - |
| CQS47_RS25180 () | 25276..25774 | + | 499 | Protein_36 | transposase | - |
| CQS47_RS25185 () | 25854..26288 | + | 435 | WP_001309734.1 | IS66 family insertion sequence hypothetical protein | - |
| CQS47_RS25190 () | 26285..26635 | + | 351 | WP_001594393.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| CQS47_RS25195 () | 26666..28279 | + | 1614 | WP_001392052.1 | IS66-like element ISEc43 family transposase | - |
| CQS47_RS25200 () | 28524..28739 | - | 216 | WP_024191430.1 | hypothetical protein | - |
| CQS47_RS25210 () | 29081..29323 | - | 243 | WP_000540593.1 | hypothetical protein | - |
| CQS47_RS25215 () | 29283..29645 | - | 363 | WP_000107524.1 | hypothetical protein | - |
| CQS47_RS25225 () | 30130..31665 | + | 1536 | WP_099590317.1 | IS21 family transposase | - |
| CQS47_RS25230 () | 31682..32437 | + | 756 | WP_001282653.1 | IS21-like element ISSso4 family helper ATPase IstB | - |
| CQS47_RS25245 () | 33190..33351 | - | 162 | WP_000775238.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 33417..33602 | - | 186 | NuclAT_0 | - | Antitoxin Detail |
| - () | 33417..33602 | - | 186 | NuclAT_0 | - | Antitoxin Detail |
| - () | 33417..33602 | - | 186 | NuclAT_0 | - | Antitoxin Detail |
| - () | 33417..33602 | - | 186 | NuclAT_0 | - | Antitoxin Detail |
| CQS47_RS25250 () | 33559..33873 | - | 315 | WP_000872086.1 | hypothetical protein | - |
| CQS47_RS25255 () | 33870..34544 | - | 675 | WP_001719371.1 | plasmid SOS inhibition protein A | - |
| CQS47_RS25260 () | 34541..34975 | - | 435 | WP_001719370.1 | conjugation system SOS inhibitor PsiB | - |
| CQS47_RS25265 () | 35030..36997 | - | 1968 | WP_099590318.1 | ParB/RepB/Spo0J family partition protein | - |
| CQS47_RS25270 () | 37058..37291 | - | 234 | WP_001297827.1 | DUF905 domain-containing protein | - |
| CQS47_RS25275 () | 37348..37869 | - | 522 | WP_032201449.1 | single-stranded DNA-binding protein | - |
| CQS47_RS25285 () | 37971..38975 | - | 1005 | Protein_52 | DUF3560 domain-containing protein | - |
| CQS47_RS25290 () | 38991..39494 | + | 504 | Protein_53 | IS256-like element IS1414 family transposase | - |
| CQS47_RS26250 () | 39530..39631 | + | 102 | Protein_54 | transposase domain-containing protein | - |
| CQS47_RS25295 () | 39670..40530 | + | 861 | Protein_55 | IS91 family transposase | - |
| CQS47_RS25300 () | 40720..40932 | + | 213 | Protein_56 | helix-turn-helix domain-containing protein | - |
| CQS47_RS25305 () | 40937..41176 | + | 240 | Protein_57 | IS21 family transposase | - |
| CQS47_RS25310 () | 41193..41948 | + | 756 | WP_001282653.1 | IS21-like element ISSso4 family helper ATPase IstB | - |
| CQS47_RS25320 () | 42041..42193 | + | 153 | Protein_59 | IS3 family transposase | - |
| CQS47_RS25325 () | 42239..42358 | + | 120 | Protein_60 | IS200/IS605 family transposase | - |
| CQS47_RS25330 () | 42751..42939 | + | 189 | WP_001595165.1 | hypothetical protein | - |
| CQS47_RS25335 () | 43087..44298 | + | 1212 | WP_001595163.1 | biotin/lipoyl-binding protein | - |
| CQS47_RS25340 () | 44295..46391 | + | 2097 | WP_001595162.1 | ATP-binding cassette domain-containing protein | - |
| CQS47_RS26255 () | 46533..47285 | + | 753 | WP_001595161.1 | hypothetical protein | - |
| CQS47_RS25350 () | 47425..47844 | + | 420 | WP_001595160.1 | IS66 family insertion sequence hypothetical protein | - |
| CQS47_RS25355 () | 47841..48191 | + | 351 | WP_001464094.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| CQS47_RS25360 () | 48222..49190 | + | 969 | Protein_67 | IS66 family transposase | - |
| CQS47_RS25365 () | 49222..49656 | + | 435 | WP_001595158.1 | DUF1380 family protein | - |
| CQS47_RS25370 () | 49701..50264 | + | 564 | Protein_69 | hypothetical protein | - |
| CQS47_RS25375 () | 50295..51908 | - | 1614 | WP_099492829.1 | IS66-like element ISEc23 family transposase | - |
| CQS47_RS25380 () | 51939..52289 | - | 351 | WP_000624720.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| CQS47_RS25385 () | 52286..52711 | - | 426 | WP_099590319.1 | transposase | - |
| CQS47_RS25390 () | 52808..53758 | - | 951 | WP_023486370.1 | virulence factor VirK | - |
| CQS47_RS25395 () | 53763..54851 | - | 1089 | WP_024171602.1 | putative hexosyltransferase CapU | - |
| CQS47_RS25400 () | 54854..55696 | - | 843 | WP_160371899.1 | polysaccharide deacetylase family protein | - |
| CQS47_RS25410 () | 55938..56291 | - | 354 | WP_001595061.1 | hypothetical protein | - |
| CQS47_RS25415 () | 56481..56738 | - | 258 | WP_001595062.1 | hypothetical protein | - |
| CQS47_RS25420 () | 57215..57628 | + | 414 | WP_001595064.1 | hypothetical protein | - |
| CQS47_RS25425 () | 57723..57929 | + | 207 | Protein_79 | tyrosine-type recombinase/integrase | - |
| CQS47_RS25430 () | 57978..58262 | + | 285 | Protein_80 | transposase | - |
| CQS47_RS25435 () | 58308..58751 | + | 444 | Protein_81 | IS1 family transposase | - |
| CQS47_RS25440 () | 59043..59915 | - | 873 | WP_001595072.1 | hypothetical protein | - |
| CQS47_RS25445 () | 59935..60765 | - | 831 | WP_001595073.1 | hypothetical protein | - |
| CQS47_RS25450 () | 60914..61213 | - | 300 | WP_071600068.1 | hypothetical protein | - |
| CQS47_RS25455 () | 61351..62094 | - | 744 | WP_001595074.1 | hypothetical protein | - |
| CQS47_RS25460 () | 62105..62869 | - | 765 | WP_001595075.1 | hypothetical protein | - |
| CQS47_RS25465 () | 62886..63653 | - | 768 | WP_024171421.1 | fimbrial protein | - |
| CQS47_RS25470 () | 63798..64301 | - | 504 | WP_001595078.1 | DUF5462 family protein | - |
| CQS47_RS25475 () | 64343..65026 | - | 684 | WP_050437387.1 | fimbria/pilus periplasmic chaperone | - |
| CQS47_RS25480 () | 65070..67469 | - | 2400 | WP_023486680.1 | PefC/AfrB family outer membrane usher protein | - |
| CQS47_RS25485 () | 67479..67997 | - | 519 | WP_001595081.1 | hypothetical protein | - |
| CQS47_RS25490 () | 68090..68365 | - | 276 | WP_001595082.1 | hypothetical protein | - |
| CQS47_RS26260 () | 68848..68949 | + | 102 | Protein_93 | transposase | - |
| CQS47_RS25505 () | 69428..69793 | - | 366 | Protein_94 | IS1 family transposase | - |
| CQS47_RS25515 () | 69947..71098 | + | 1152 | WP_001595195.1 | IS30-like element IS30 family transposase | - |
| CQS47_RS25520 () | 71130..72651 | - | 1522 | Protein_96 | IS3 family transposase | - |
| CQS47_RS25530 () | 74350..74667 | - | 318 | Protein_97 | transposase | - |
| CQS47_RS25535 () | 74728..74904 | - | 177 | Protein_98 | AAA family ATPase | - |
| CQS47_RS25540 () | 75021..75233 | + | 213 | WP_001595089.1 | hypothetical protein | - |
| CQS47_RS25550 () | 75919..76527 | + | 609 | WP_024191425.1 | hypothetical protein | - |
| CQS47_RS25555 () | 76748..77113 | + | 366 | Protein_101 | transposase | - |
| CQS47_RS25560 () | 77107..77328 | + | 222 | Protein_102 | IS91 family transposase | - |
| CQS47_RS25565 () | 77687..78511 | - | 825 | WP_001595093.1 | A24 family peptidase | - |
| CQS47_RS25570 () | 78517..79581 | - | 1065 | WP_001595094.1 | hypothetical protein | - |
| CQS47_RS25575 () | 79596..80621 | - | 1026 | WP_001595096.1 | type II secretion system F family protein | - |
| CQS47_RS25580 () | 80608..81939 | - | 1332 | WP_024171392.1 | Flp pilus assembly complex ATPase component TadA | - |
| CQS47_RS25585 () | 82137..82625 | - | 489 | WP_001595098.1 | hypothetical protein | - |
| CQS47_RS25590 () | 82613..83440 | - | 828 | WP_001595099.1 | hypothetical protein | - |
| CQS47_RS25595 () | 83442..84002 | - | 561 | WP_001595100.1 | hypothetical protein | - |
| CQS47_RS25600 () | 84005..85462 | - | 1458 | WP_001595102.1 | hypothetical protein | - |
| CQS47_RS26265 () | 85479..85898 | - | 420 | WP_001595103.1 | TcpQ domain-containing protein | - |
| CQS47_RS25610 () | 85917..87482 | - | 1566 | WP_157774463.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| CQS47_RS25615 () | 87543..88250 | - | 708 | WP_001595105.1 | type IV pilus major pilin | - |
| CQS47_RS25620 () | 88554..88997 | - | 444 | WP_001595106.1 | transglycosylase SLT domain-containing protein | - |
| CQS47_RS25625 () | 89005..89847 | - | 843 | WP_001595107.1 | helix-turn-helix domain-containing protein | - |
| CQS47_RS25630 () | 90122..90370 | - | 249 | WP_099590323.1 | adhesin biosynthesis transcription regulatory family protein | - |
| CQS47_RS25635 () | 90910..91038 | + | 129 | Protein_117 | transcriptional regulator | - |
| CQS47_RS25640 () | 91159..91899 | + | 741 | Protein_118 | site-specific integrase | - |
| CQS47_RS25645 () | 91989..93510 | + | 1522 | Protein_119 | IS3 family transposase | - |
| CQS47_RS25650 () | 93868..94845 | - | 978 | WP_001595112.1 | RepB family plasmid replication initiator protein | - |
| CQS47_RS25665 () | 95718..96849 | - | 1132 | Protein_121 | IS91 family transposase | - |
| CQS47_RS25670 () | 96849..97145 | - | 297 | WP_000766063.1 | hypothetical protein | - |
| CQS47_RS25675 () | 97249..97575 | - | 327 | WP_001595119.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CQS47_RS25680 () | 97572..97823 | - | 252 | WP_001595120.1 | hypothetical protein | Antitoxin Detail |
| CQS47_RS25690 () | 98377..99243 | + | 867 | WP_001595122.1 | AAA family ATPase | - |
| CQS47_RS25695 () | 99243..100274 | + | 1032 | WP_001595123.1 | ParB/RepB/Spo0J family partition protein | - |
| CQS47_RS25700 () | 100298..100711 | + | 414 | WP_032159708.1 | hypothetical protein | - |
| CQS47_RS26470 () | 100708..101031 | + | 324 | WP_000143877.1 | hypothetical protein | - |
| CQS47_RS25710 () | 101070..102344 | - | 1275 | WP_001595125.1 | Y-family DNA polymerase | - |
| CQS47_RS25715 () | 102344..102766 | - | 423 | WP_001595126.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CQS47_RS25720 () | 103067..104032 | + | 966 | Protein_131 | ISL3 family transposase | - |
| CQS47_RS25725 () | 104026..104436 | - | 411 | Protein_132 | IS66 family transposase | - |
| CQS47_RS25730 () | 104486..104833 | - | 348 | WP_001595131.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| CQS47_RS26475 () | 104830..105210 | - | 381 | WP_001171540.1 | IS66 family insertion sequence hypothetical protein | - |
| CQS47_RS25740 () | 105304..105744 | + | 441 | Protein_135 | IS3 family transposase | - |
| CQS47_RS25745 () | 105789..106064 | + | 276 | Protein_136 | incFII family plasmid replication initiator RepA | - |
| CQS47_RS25750 () | 106096..106263 | + | 168 | Protein_137 | IS91 family transposase | - |
| CQS47_RS25755 () | 106579..106776 | - | 198 | WP_001413878.1 | ANR family transcriptional regulator | - |
| CQS47_RS25760 () | 106973..107770 | + | 798 | WP_001595134.1 | CFA/I fimbrial subunit CfaD | - |
| CQS47_RS25765 () | 108138..108374 | - | 237 | Protein_140 | IS91 family transposase | - |
| CQS47_RS25770 () | 108370..109960 | - | 1591 | Protein_141 | DUF4158 domain-containing protein | - |
| CQS47_RS25775 () | 110090..110719 | - | 630 | WP_001595149.1 | hypothetical protein | - |
| CQS47_RS25780 () | 110773..111442 | - | 670 | Protein_143 | AAA family ATPase | - |
| CQS47_RS25785 () | 111712..111834 | + | 123 | Protein_144 | IS1 family transposase | - |
| CQS47_RS25790 () | 112114..112674 | + | 561 | WP_001595151.1 | recombinase family protein | - |
| CQS47_RS25795 () | 112677..115646 | + | 2970 | WP_001595152.1 | Tn3 family transposase | - |
| CQS47_RS25805 () | 115860..116156 | + | 297 | WP_000766063.1 | hypothetical protein | - |
| CQS47_RS25810 () | 116156..117007 | + | 852 | Protein_148 | IS91 family transposase | - |
| CQS47_RS25815 () | 117084..117509 | + | 426 | WP_000436083.1 | IS66 family insertion sequence hypothetical protein | - |
| CQS47_RS25820 () | 117506..117856 | + | 351 | WP_000624720.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| CQS47_RS25825 () | 117887..119500 | + | 1614 | WP_099590321.1 | IS66-like element ISEc23 family transposase | - |
| CQS47_RS25830 () | 119532..119875 | + | 344 | Protein_152 | transposase | - |
| CQS47_RS25835 () | 120064..120626 | + | 563 | Protein_153 | IS1 family transposase | - |
| CQS47_RS25840 () | 120640..123075 | - | 2436 | WP_001595137.1 | CS6 fimbrial usher CssD | - |
| CQS47_RS25845 () | 123032..123730 | - | 699 | WP_001595139.1 | CS6 fimbrial biogenesis chaperone CssC | - |
| CQS47_RS25850 () | 123779..124282 | - | 504 | WP_001595140.1 | CS6 fimbrial subunit CssB | - |
| CQS47_RS25855 () | 124300..124764 | - | 465 | WP_001595141.1 | hypothetical protein | - |
| CQS47_RS25860 () | 124919..125143 | - | 225 | Protein_158 | transposase | - |
| CQS47_RS26275 () | 125362..125535 | - | 174 | WP_001717498.1 | hypothetical protein | - |
| CQS47_RS25870 () | 125903..126618 | - | 716 | Protein_160 | transposase | - |
| CQS47_RS25875 () | 126661..126933 | - | 273 | WP_000566440.1 | hypothetical protein | - |
| CQS47_RS25880 () | 126926..127504 | - | 579 | WP_001400936.1 | recombinase family protein | - |
| CQS47_RS25885 () | 127654..130701 | + | 3048 | WP_001595216.1 | Tn3 family transposase | - |
| CQS47_RS25890 () | 130710..130874 | - | 165 | Protein_164 | IS91 family transposase | - |
| CQS47_RS26280 () | 130867..131079 | + | 213 | WP_148717951.1 | hypothetical protein | - |
| CQS47_RS25900 () | 131490..132677 | + | 1188 | WP_024191434.1 | peptide antibiotic transporter SbmA | - |
| CQS47_RS25905 () | 132974..134062 | - | 1089 | Protein_167 | IS3 family transposase | - |
| CQS47_RS25910 () | 134243..134869 | - | 627 | WP_001595210.1 | ABC transporter ATP-binding protein | - |
| CQS47_RS25915 () | 134862..135635 | - | 774 | WP_050437394.1 | hypothetical protein | - |
| CQS47_RS25920 () | 135592..136794 | - | 1203 | WP_001595205.1 | TolC family protein | - |
| CQS47_RS25925 () | 136791..137921 | - | 1131 | WP_023486619.1 | ABC transporter permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|