MGE detailed information
MGE type: Conjugative plasmid MGE length: 152012 bp
Accession: NZ_CP024244 Location: 1..152012 Organism: Escherichia coli O128:H27 strain 90-9281 Replicon: plasmid unnamed
Accession: NZ_CP024244 Location: 1..152012 Organism: Escherichia coli O128:H27 strain 90-9281 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| COG34_RS25840 () | 126..620 | + | 495 | WP_001203078.1 | DUF2919 family protein | - |
| COG34_RS25845 () | 689..961 | - | 273 | Protein_2 | IS21 family transposase | - |
| COG34_RS25850 () | 1141..1782 | + | 642 | WP_000470628.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| COG34_RS25855 () | 1831..2121 | + | 291 | Protein_4 | IS66 family transposase ISEc43 | Transposase |
| COG34_RS25860 () | 2151..3722 | - | 1572 | WP_000381379.1 | IS66 family transposase ISCro1 | Transposase |
| COG34_RS25865 () | 3742..4089 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| COG34_RS25870 () | 4089..4766 | - | 678 | WP_099588451.1 | IS66 family transposase ISCro1 | Transposase |
| COG34_RS25875 () | 4811..5422 | + | 612 | Protein_8 | IS66 family transposase ISEc43 | Transposase |
| COG34_RS25880 () | 5688..5906 | - | 219 | Protein_9 | IS5 family transposase IS903B | Transposase |
| COG34_RS25885 () | 6124..7488 | + | 1365 | Protein_10 | IS21 family transposase ISEc12 | Transposase |
| COG34_RS25890 () | 7545..8758 | + | 1214 | WP_187536093.1 | IS3 family transposase IS629 | Transposase |
| COG34_RS25895 () | 8862..9110 | - | 249 | Protein_12 | IS3 family transposase ISEhe3 | Transposase |
| COG34_RS25905 () | 9594..9947 | + | 354 | WP_001494857.1 | hypothetical protein | - |
| COG34_RS27120 () | 10168..10419 | - | 252 | WP_001464003.1 | IS66 family transposase ISEc23 | Transposase |
| COG34_RS27285 () | 10515..10734 | - | 220 | Protein_15 | IS3 family transposase | - |
| COG34_RS27290 () | 10881..11393 | - | 513 | Protein_16 | Tn3 family transposase | - |
| COG34_RS25925 () | 11504..12718 | - | 1215 | WP_001498835.1 | hypothetical protein | - |
| COG34_RS25930 () | 12730..13359 | - | 630 | WP_000593532.1 | ABC transporter ATP-binding protein | - |
| COG34_RS25935 () | 13352..14173 | - | 822 | WP_032181798.1 | membrane protein | - |
| COG34_RS25940 () | 14070..15296 | - | 1227 | WP_001269347.1 | TolC family protein | - |
| COG34_RS25945 () | 15293..16423 | - | 1131 | WP_000258161.1 | ABC transporter permease | - |
| COG34_RS25950 () | 16908..17956 | - | 1049 | Protein_22 | IS3 family transposase ISEc16 | Transposase |
| COG34_RS25955 () | 18020..18553 | - | 534 | Protein_23 | IS3 family transposase ISKpn38 | Transposase |
| COG34_RS25960 () | 18930..19148 | + | 219 | WP_013188501.1 | Heat-stable enterotoxin A3/A4 | VF |
| COG34_RS25965 () | 19354..20100 | - | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| COG34_RS25970 () | 20115..20297 | - | 183 | Protein_26 | IS21 family transposase | - |
| COG34_RS25980 () | 21555..21737 | - | 183 | WP_001464039.1 | IS66 family transposase ISEc23 | Transposase |
| COG34_RS25985 () | 21768..22118 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| COG34_RS25990 () | 22115..22435 | - | 321 | WP_001464040.1 | IS66 family transposase ISEc23 | Transposase |
| COG34_RS25995 () | 22451..23431 | + | 981 | WP_000019402.1 | IS5 family transposase IS5D | Transposase |
| COG34_RS26005 () | 23789..24019 | + | 231 | WP_000217718.1 | hypothetical protein | - |
| COG34_RS26010 () | 24071..25432 | + | 1362 | WP_099588460.1 | DUF3560 domain-containing protein | - |
| COG34_RS26015 () | 25479..26042 | + | 564 | WP_001460283.1 | class I SAM-dependent methyltransferase | - |
| COG34_RS26040 () | 26874..27401 | + | 528 | WP_000290822.1 | single-stranded DNA-binding protein | - |
| COG34_RS26045 () | 27458..27691 | + | 234 | WP_000005971.1 | DUF905 domain-containing protein | - |
| COG34_RS26050 () | 27755..29719 | + | 1965 | WP_001759171.1 | ParB/RepB/Spo0J family partition protein | - |
| COG34_RS26055 () | 29774..30208 | + | 435 | WP_000845950.1 | conjugation system SOS inhibitor PsiB | - |
| COG34_RS26060 () | 30205..30924 | + | 720 | WP_000994093.1 | plasmid SOS inhibition protein A | - |
| COG34_RS26065 () | 30921..31235 | + | 315 | WP_000872086.1 | hypothetical protein | - |
| - () | 31192..31392 | + | 201 | NuclAT_0 | - | - |
| - () | 31192..31392 | + | 201 | NuclAT_0 | - | - |
| - () | 31192..31392 | + | 201 | NuclAT_0 | - | - |
| - () | 31192..31392 | + | 201 | NuclAT_0 | - | - |
| COG34_RS26070 () | 31444..31605 | + | 162 | WP_001332444.1 | type I toxin-antitoxin system Hok family toxin | - |
| COG34_RS27295 () | 31843..32203 | - | 361 | Protein_42 | hypothetical protein | - |
| COG34_RS26090 () | 32500..32796 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| COG34_RS26095 () | 32908..33729 | + | 822 | WP_001234441.1 | DUF945 domain-containing protein | - |
| COG34_RS26100 () | 34026..34532 | - | 507 | WP_000843913.1 | hypothetical protein | VF |
| COG34_RS26105 () | 35002..35385 | + | 384 | WP_001137411.1 | relaxosome protein TraM | - |
| COG34_RS27300 () | 36002..36277 | + | 276 | WP_000234737.1 | hypothetical protein | - |
| COG34_RS26115 () | 36785..37144 | + | 360 | WP_001054220.1 | type IV conjugative transfer system pilin TraA | - |
| COG34_RS26120 () | 37146..37451 | + | 306 | WP_000016323.1 | type IV conjugative transfer system protein TraL | - |
| COG34_RS26125 () | 37471..38034 | + | 564 | WP_000406020.1 | type IV conjugative transfer system protein TraE | - |
| COG34_RS26130 () | 38024..38764 | + | 741 | WP_000794311.1 | type-F conjugative transfer system secretin TraK | - |
| COG34_RS26135 () | 38751..40115 | + | 1365 | WP_000024505.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| COG34_RS26140 () | 40227..40451 | + | 225 | WP_000786056.1 | TraR/DksA C4-type zinc finger protein | - |
| COG34_RS26145 () | 40455..40640 | + | 186 | WP_000797318.1 | hypothetical protein | - |
| COG34_RS26150 () | 40624..41034 | + | 411 | WP_000210715.1 | hypothetical protein | - |
| COG34_RS26155 () | 41094..41693 | + | 600 | WP_000724374.1 | type IV conjugative transfer system lipoprotein TraV | - |
| COG34_RS26160 () | 41704..44295 | + | 2592 | WP_000714172.1 | type IV secretion system protein TraC | - |
| COG34_RS26165 () | 44292..44756 | + | 465 | WP_000206178.1 | type-F conjugative transfer system protein TrbI | - |
| COG34_RS26170 () | 44756..45391 | + | 636 | WP_000286241.1 | type-F conjugative transfer system protein TraW | - |
| COG34_RS26175 () | 45388..46374 | + | 987 | WP_001083236.1 | conjugal transfer pilus assembly protein TraU | - |
| COG34_RS26180 () | 46385..46753 | + | 369 | WP_000961327.1 | hypothetical protein | - |
| COG34_RS26185 () | 46750..47364 | + | 615 | WP_000832605.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| COG34_RS26190 () | 47361..49199 | + | 1839 | WP_000833258.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| COG34_RS26195 () | 49196..49975 | + | 780 | WP_001202909.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| COG34_RS26200 () | 49999..50601 | + | 603 | WP_000906492.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| COG34_RS26205 () | 50607..51968 | + | 1362 | WP_001237467.1 | F-type conjugal transfer protein TraH | - |
| COG34_RS26210 () | 51970..54861 | + | 2892 | WP_000963408.1 | conjugal transfer mating pair stabilization protein TraG | - |
| COG34_RS26215 () | 54871..55428 | + | 558 | WP_001232425.1 | hypothetical protein | - |
| COG34_RS26220 () | 55603..56340 | + | 738 | WP_000812363.1 | complement resistance protein TraT | - |
| COG34_RS26225 () | 56484..58715 | + | 2232 | WP_000056170.1 | type IV conjugative transfer system coupling protein TraD | - |
| COG34_RS26230 () | 58715..64015 | + | 5301 | WP_087603298.1 | Multifunctional conjugation protein TraI | Relaxase |
| COG34_RS26235 () | 64033..64599 | + | 567 | WP_000469207.1 | DUF2726 domain-containing protein | - |
| COG34_RS26240 () | 64596..65327 | + | 732 | WP_001071488.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| COG34_RS26245 () | 65552..65734 | - | 183 | WP_001393357.1 | hypothetical protein | - |
| COG34_RS26250 () | 66241..66498 | + | 258 | WP_000083823.1 | replication regulatory protein RepA | - |
| COG34_RS26260 () | 66734..66808 | + | 75 | WP_011387702.1 | RepA leader peptide Tap | - |
| COG34_RS26265 () | 66801..67658 | + | 858 | WP_000130978.1 | incFII family plasmid replication initiator RepA | - |
| COG34_RS26280 () | 68573..68842 | + | 270 | WP_000079948.1 | hypothetical protein | Antitoxin Detail |
| COG34_RS26285 () | 68839..69120 | + | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| COG34_RS26290 () | 69166..70014 | + | 849 | WP_001057994.1 | 3'-5' exonuclease | - |
| COG34_RS26295 () | 70131..70613 | + | 483 | WP_032182006.1 | hypothetical protein | - |
| COG34_RS26310 () | 71148..71750 | - | 603 | WP_000517689.1 | hypothetical protein | - |
| COG34_RS26320 () | 72104..72736 | + | 633 | WP_170866378.1 | hypothetical protein | - |
| COG34_RS26325 () | 72657..74228 | - | 1572 | WP_000381379.1 | IS66 family transposase ISCro1 | Transposase |
| COG34_RS26330 () | 74248..74595 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| COG34_RS26335 () | 74595..75272 | - | 678 | WP_099588451.1 | IS66 family transposase ISCro1 | Transposase |
| COG34_RS26345 () | 75332..75855 | - | 524 | Protein_87 | IS1 family transposase | - |
| COG34_RS26350 () | 76382..76831 | + | 450 | WP_000649995.1 | hypothetical protein | - |
| COG34_RS26365 () | 78609..79214 | - | 606 | Protein_90 | IS66 family transposase ISEc47 | Transposase |
| COG34_RS26370 () | 79245..79397 | - | 153 | Protein_91 | IS66 family insertion sequence element accessory protein TnpB | - |
| COG34_RS26380 () | 80657..80905 | + | 249 | Protein_93 | IS91 family transposase | - |
| COG34_RS26385 () | 81213..81929 | + | 717 | WP_001460290.1 | hypothetical protein | VF |
| COG34_RS26390 () | 81958..82467 | + | 510 | WP_000768758.1 | CFA/I fimbrial subunit B | VF |
| COG34_RS26395 () | 82477..83004 | + | 528 | WP_000768759.1 | CFA/I fimbrial subunit B | VF |
| COG34_RS26400 () | 83120..85687 | + | 2568 | WP_077635032.1 | hypothetical protein | VF |
| COG34_RS26405 () | 85691..86776 | + | 1086 | WP_001033659.1 | CFA/I fimbrial subunit E | VF |
| COG34_RS26410 () | 86937..87734 | - | 798 | WP_001009833.1 | CFA/I fimbrial subunit D | VF |
| COG34_RS26415 () | 87931..88125 | + | 195 | WP_024168605.1 | ANR family transcriptional regulator | - |
| COG34_RS26420 () | 89445..90308 | + | 864 | WP_001460292.1 | Right origin-binding protein | VF |
| COG34_RS26425 () | 90453..90560 | - | 108 | Protein_102 | IS110 family transposase ISEc21 | Transposase |
| COG34_RS26430 () | 90700..90912 | - | 213 | Protein_103 | Major pilu subunit operon regulatory protein PapB | VF |
| COG34_RS26435 () | 91032..91466 | + | 435 | WP_001309734.1 | IS66 family transposase ISEc43 | Transposase |
| COG34_RS26440 () | 91463..91663 | + | 201 | Protein_105 | IS66 family transposase ISEc47 | Transposase |
| COG34_RS26445 () | 91728..92890 | + | 1163 | WP_085947598.1 | IS3 family transposase ISEc17 | Transposase |
| COG34_RS27125 () | 92887..93033 | - | 147 | WP_157774455.1 | hypothetical protein | - |
| COG34_RS26450 () | 93403..95340 | + | 1938 | WP_000433597.1 | NACHT domain-containing protein | - |
| COG34_RS26455 () | 95620..95886 | + | 267 | WP_001356324.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| COG34_RS26460 () | 95955..96122 | + | 168 | WP_001356323.1 | hypothetical protein | - |
| COG34_RS26465 () | 96144..96365 | + | 222 | WP_085951106.1 | serine/threonine protein kinase | - |
| COG34_RS26470 () | 96486..97226 | + | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| COG34_RS26475 () | 97511..98488 | - | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| COG34_RS26485 () | 99275..99940 | + | 666 | WP_001356322.1 | hypothetical protein | - |
| COG34_RS26490 () | 100099..100839 | - | 741 | WP_000933099.1 | abortive infection family protein | - |
| COG34_RS26495 () | 100875..101663 | - | 789 | WP_000708302.1 | DUF2971 domain-containing protein | - |
| COG34_RS26500 () | 101660..102280 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| COG34_RS26505 () | 102277..102960 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| COG34_RS26510 () | 103401..103814 | + | 414 | WP_000465050.1 | hypothetical protein | - |
| COG34_RS26515 () | 103816..104298 | + | 483 | Protein_120 | tyrosine-type recombinase/integrase | - |
| COG34_RS26530 () | 105629..105934 | + | 306 | Protein_122 | IS91 family transposase ISSod25 | Transposase |
| COG34_RS26535 () | 106072..106347 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| COG34_RS26540 () | 106341..106985 | - | 645 | WP_000633914.1 | AAA family ATPase | - |
| COG34_RS26550 () | 108537..109265 | + | 729 | Protein_126 | IS91 family transposase ISEc37 | Transposase |
| COG34_RS26560 () | 110525..111133 | - | 609 | WP_016233127.1 | hypothetical protein | - |
| COG34_RS26565 () | 111203..111553 | - | 351 | WP_063101299.1 | hypothetical protein | - |
| COG34_RS26570 () | 112094..113020 | + | 927 | WP_001280608.1 | hypothetical protein | - |
| COG34_RS26575 () | 113064..113318 | + | 255 | WP_000678529.1 | hypothetical protein | - |
| COG34_RS26580 () | 113815..114159 | + | 345 | WP_000793772.1 | hypothetical protein | - |
| COG34_RS26585 () | 114343..115344 | - | 1002 | WP_000138754.1 | DUF4238 domain-containing protein | - |
| COG34_RS26590 () | 115679..116542 | + | 864 | WP_059278049.1 | hypothetical protein | - |
| COG34_RS26595 () | 116567..118066 | - | 1500 | WP_099588462.1 | RES family NAD+ phosphorylase | - |
| COG34_RS26600 () | 118334..118591 | + | 258 | WP_000371887.1 | hypothetical protein | - |
| COG34_RS26605 () | 118591..119181 | + | 591 | WP_045133249.1 | hypothetical protein | - |
| COG34_RS26610 () | 119199..119546 | - | 348 | WP_000142443.1 | hypothetical protein | - |
| COG34_RS26620 () | 119675..120010 | + | 336 | WP_001080730.1 | colicin 1A immunity protein | - |
| COG34_RS26625 () | 120032..121912 | - | 1881 | WP_032221836.1 | colicin | - |
| COG34_RS27305 () | 122077..122160 | + | 84 | Protein_141 | ClbS/DfsB family four-helix bundle protein | - |
| COG34_RS26630 () | 122214..122891 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| COG34_RS26635 () | 122891..123238 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| COG34_RS26640 () | 123258..124829 | + | 1572 | WP_000381379.1 | IS66 family transposase ISCro1 | Transposase |
| COG34_RS26650 () | 124832..125302 | + | 471 | WP_099588463.1 | hypothetical protein | VF |
| COG34_RS26655 () | 125321..126541 | + | 1221 | WP_000343765.1 | ISL3 family transposase ISEc53 | Transposase |
| COG34_RS26660 () | 126605..126853 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| COG34_RS26665 () | 126850..127287 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| COG34_RS26670 () | 127287..128561 | + | 1275 | WP_000457490.1 | Y-family DNA polymerase | - |
| COG34_RS26675 () | 128563..128979 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| COG34_RS26680 () | 128972..129952 | - | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| COG34_RS26685 () | 130365..130673 | - | 309 | WP_000030201.1 | hypothetical protein | - |
| COG34_RS26690 () | 130760..131404 | - | 645 | WP_001144036.1 | ParA family protein | - |
| COG34_RS26695 () | 131585..132361 | - | 777 | WP_001495932.1 | site-specific integrase | - |
| COG34_RS26700 () | 132412..133191 | - | 780 | WP_000535296.1 | hypothetical protein | - |
| COG34_RS26705 () | 133244..133558 | - | 315 | WP_001302628.1 | hypothetical protein | - |
| COG34_RS26710 () | 134184..135203 | + | 1020 | Protein_157 | IS110 family transposase ISEc66 | Transposase |
| COG34_RS26715 () | 135484..135714 | + | 231 | WP_024220872.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| COG34_RS26720 () | 135711..136127 | + | 417 | WP_001356337.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| COG34_RS26725 () | 136094..136441 | - | 348 | Protein_160 | IS66 family transposase ISSfl3 | Transposase |
| COG34_RS26740 () | 137995..138270 | + | 276 | Protein_162 | IS3 family transposase ISLad1 | Transposase |
| COG34_RS26745 () | 138279..138428 | - | 150 | Protein_163 | IS3 family transposase ISSfl10 | Transposase |
| COG34_RS26750 () | 138744..139441 | - | 698 | Protein_164 | IS1 family transposase | - |
| COG34_RS26755 () | 139474..139794 | + | 321 | WP_122993797.1 | hypothetical protein | - |
| COG34_RS26760 () | 140259..140507 | + | 249 | WP_000513531.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| COG34_RS26765 () | 140504..140851 | + | 348 | WP_000681610.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| COG34_RS26775 () | 141078..142249 | - | 1172 | Protein_168 | IS91 family transposase ISEc37 | Transposase |
| COG34_RS26780 () | 142249..142614 | - | 366 | WP_000124139.1 | hypothetical protein | - |
| COG34_RS26790 () | 142696..143298 | + | 603 | Protein_170 | IS3 family transposase IS2 | Transposase |
| COG34_RS26795 () | 143500..145311 | + | 1812 | WP_000260520.1 | Heme/hemopexin transporter protein HuxB | VF |
| COG34_RS26800 () | 145402..149943 | + | 4542 | WP_099588464.1 | Heme/hemopexin-binding protein | VF |
| COG34_RS26805 () | 149968..150153 | + | 186 | WP_000894829.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|