MGE detailed information
MGE type: Conjugative plasmid MGE length: 138672 bp
Accession: NZ_CP023850 Location: 1..138672 Organism: Escherichia coli strain 4/0 Replicon: plasmid p4_0.1
Accession: NZ_CP023850 Location: 1..138672 Organism: Escherichia coli strain 4/0 Replicon: plasmid p4_0.1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CRT34_RS26225 () | 295..555 | - | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| CRT34_RS26230 () | 795..1385 | - | 591 | WP_000766805.1 | DUF2726 domain-containing protein | - |
| CRT34_RS26235 () | 1423..1632 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| CRT34_RS26240 () | 1678..2139 | - | 462 | WP_001233838.1 | thermonuclease family protein | - |
| CRT34_RS26245 () | 2384..2596 | - | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| CRT34_RS26250 () | 2725..3285 | - | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| CRT34_RS26255 () | 3388..4248 | - | 861 | WP_000704528.1 | putative protein YcjY | VF |
| CRT34_RS26260 () | 4307..5053 | - | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| CRT34_RS26265 () | 5073..10343 | - | 5271 | WP_000986934.1 | Multifunctional conjugation protein TraI | Relaxase |
| CRT34_RS26270 () | 10343..12568 | - | 2226 | WP_052935733.1 | type IV conjugative transfer system coupling protein TraD | - |
| CRT34_RS26280 () | 12821..13552 | - | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| CRT34_RS26285 () | 13584..14081 | - | 498 | WP_000605861.1 | hypothetical protein | - |
| CRT34_RS26290 () | 14100..16919 | - | 2820 | WP_001007057.1 | conjugal transfer mating pair stabilization protein TraG | - |
| CRT34_RS26295 () | 16916..18289 | - | 1374 | WP_001137364.1 | conjugal transfer protein TraH | - |
| CRT34_RS26300 () | 18276..18701 | - | 426 | WP_001448114.1 | F-type conjugal transfer protein TrbF | - |
| CRT34_RS26305 () | 18649..18990 | - | 342 | WP_001448115.1 | P-type conjugative transfer protein TrbJ | - |
| CRT34_RS26310 () | 18920..19465 | - | 546 | WP_000059824.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| CRT34_RS26315 () | 19452..19736 | - | 285 | WP_001448202.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CRT34_RS26320 () | 19863..20201 | - | 339 | WP_001287905.1 | conjugal transfer protein TrbA | - |
| CRT34_RS26325 () | 20217..20960 | - | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| CRT34_RS26330 () | 20953..21210 | - | 258 | WP_000864320.1 | conjugal transfer protein TrbE | - |
| CRT34_RS26335 () | 21237..23045 | - | 1809 | WP_000821863.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| CRT34_RS26340 () | 23042..23680 | - | 639 | WP_001080257.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| CRT34_RS26345 () | 23689..23994 | - | 306 | WP_000224411.1 | hypothetical protein | - |
| CRT34_RS26350 () | 24024..25016 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| CRT34_RS26355 () | 25013..25645 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| CRT34_RS26360 () | 25642..26028 | - | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| CRT34_RS26365 () | 26025..28652 | - | 2628 | WP_001064239.1 | type IV secretion system protein TraC | - |
| CRT34_RS26370 () | 28812..29033 | - | 222 | WP_001278978.1 | conjugal transfer protein TraR | - |
| CRT34_RS26375 () | 29168..29683 | - | 516 | WP_000809893.1 | type IV conjugative transfer system lipoprotein TraV | - |
| CRT34_RS26380 () | 29680..29931 | - | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| CRT34_RS26385 () | 29924..30277 | - | 354 | WP_071528018.1 | conjugal transfer protein TrbD | - |
| CRT34_RS26390 () | 30231..30815 | - | 585 | WP_000002795.1 | conjugal transfer protein TraP | - |
| CRT34_RS26395 () | 30805..32232 | - | 1428 | WP_000146638.1 | conjugal transfer protein TraB | - |
| CRT34_RS26400 () | 32232..32936 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| CRT34_RS26405 () | 32947..33513 | - | 567 | WP_000399804.1 | type IV conjugative transfer system protein TraE | - |
| CRT34_RS26410 () | 33535..33846 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| CRT34_RS26415 () | 33851..34213 | - | 363 | WP_001098998.1 | type IV conjugative transfer system pilin TraA | - |
| CRT34_RS26420 () | 34247..34474 | - | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| CRT34_RS26425 () | 34568..35254 | - | 687 | WP_000332487.1 | PAS domain-containing protein | - |
| CRT34_RS26430 () | 35448..35831 | - | 384 | WP_001151564.1 | relaxosome protein TraM | - |
| CRT34_RS26435 () | 36117..36764 | + | 648 | WP_000614282.1 | hypothetical protein | VF |
| CRT34_RS26440 () | 37061..37882 | - | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| CRT34_RS26445 () | 38003..38290 | - | 288 | WP_000107537.1 | hypothetical protein | - |
| CRT34_RS26470 () | 39209..39367 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 39411..39635 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 39411..39635 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 39411..39635 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 39411..39635 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| CRT34_RS28045 () | 39447..39635 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| CRT34_RS26475 () | 39647..40366 | - | 720 | WP_001276234.1 | plasmid SOS inhibition protein A | - |
| CRT34_RS26480 () | 40363..40797 | - | 435 | WP_000845901.1 | conjugation system SOS inhibitor PsiB | - |
| CRT34_RS26485 () | 40852..42810 | - | 1959 | WP_001145469.1 | ParB/RepB/Spo0J family partition protein | - |
| CRT34_RS26490 () | 42869..43102 | - | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| CRT34_RS26495 () | 43158..43685 | - | 528 | WP_000290793.1 | single-stranded DNA-binding protein | - |
| CRT34_RS26530 () | 44555..45118 | - | 564 | WP_012783964.1 | class I SAM-dependent methyltransferase | - |
| CRT34_RS26535 () | 45165..46526 | - | 1362 | WP_000170728.1 | DUF3560 domain-containing protein | - |
| CRT34_RS26540 () | 46578..46808 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| CRT34_RS26550 () | 47843..48034 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| CRT34_RS26555 () | 48031..48453 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| CRT34_RS26560 () | 48500..48802 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| CRT34_RS26570 () | 49342..50118 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| CRT34_RS26575 () | 50169..50603 | - | 435 | WP_000274437.1 | DUF1380 family protein | - |
| CRT34_RS26580 () | 50617..50838 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| CRT34_RS26585 () | 50839..51522 | - | 684 | WP_000086185.1 | DNA methylase | - |
| CRT34_RS26590 () | 51599..51903 | - | 305 | Protein_63 | hypothetical protein | - |
| CRT34_RS26595 () | 51907..52809 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| CRT34_RS26610 () | 53676..54647 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| CRT34_RS26615 () | 54647..55813 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| CRT34_RS26620 () | 56401..57156 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| CRT34_RS26625 () | 57930..58736 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| CRT34_RS26630 () | 58737..59042 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| CRT34_RS26635 () | 59044..59262 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| CRT34_RS26640 () | 59808..60320 | + | 513 | WP_000151784.1 | hypothetical protein | - |
| CRT34_RS26645 () | 60354..61505 | - | 1152 | WP_031325939.1 | DUF3800 domain-containing protein | - |
| CRT34_RS26650 () | 61567..61992 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| CRT34_RS26655 () | 61989..62339 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| CRT34_RS26660 () | 62370..63983 | + | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| CRT34_RS26665 () | 64194..64967 | - | 774 | WP_000905949.1 | hypothetical protein | - |
| CRT34_RS26670 () | 64980..65480 | - | 501 | WP_000528932.1 | hypothetical protein | - |
| CRT34_RS26675 () | 65745..65975 | + | 231 | WP_001261278.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| CRT34_RS26680 () | 65972..66388 | + | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CRT34_RS26685 () | 66433..70227 | - | 3795 | WP_001144732.1 | hypothetical protein | - |
| CRT34_RS26690 () | 70608..70838 | + | 231 | WP_001261286.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| CRT34_RS26695 () | 70835..71251 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CRT34_RS26700 () | 71326..72891 | + | 1566 | WP_001128474.1 | AAA family ATPase | - |
| CRT34_RS26705 () | 72876..73898 | + | 1023 | WP_000361402.1 | helicase UvrD | - |
| CRT34_RS26710 () | 74152..74849 | - | 698 | Protein_85 | IS1 family transposase IS1S | Transposase |
| CRT34_RS26720 () | 75138..75445 | - | 308 | Protein_86 | type II toxin-antitoxin system ParD family antitoxin | - |
| CRT34_RS26730 () | 75938..77107 | + | 1170 | WP_001072355.1 | hypothetical protein | - |
| CRT34_RS26735 () | 77140..77268 | + | 129 | Protein_88 | IS481 family transposase | - |
| CRT34_RS26740 () | 77303..77596 | - | 294 | WP_001105060.1 | hypothetical protein | - |
| CRT34_RS26745 () | 77702..77977 | - | 276 | WP_000421272.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CRT34_RS26750 () | 77977..78261 | - | 285 | WP_001387467.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| CRT34_RS26755 () | 78866..79618 | + | 753 | WP_000562172.1 | IclR family transcriptional regulator | - |
| CRT34_RS26760 () | 79664..80629 | - | 966 | WP_001022265.1 | 2-keto-3-deoxygluconate transporter | - |
| CRT34_RS26765 () | 80662..81042 | - | 381 | WP_000710783.1 | Rid family detoxifying hydrolase | - |
| CRT34_RS26770 () | 81067..81957 | - | 891 | WP_001077068.1 | dihydrodipicolinate synthase family protein | - |
| CRT34_RS26780 () | 82358..82798 | + | 441 | Protein_96 | zinc-binding dehydrogenase | - |
| CRT34_RS26785 () | 82929..83807 | + | 879 | WP_000338039.1 | sugar ABC transporter permease | - |
| CRT34_RS26790 () | 83797..84684 | + | 888 | WP_001271561.1 | carbohydrate ABC transporter permease | - |
| CRT34_RS26795 () | 84695..85519 | + | 825 | WP_000922702.1 | phosphodiesterase | - |
| CRT34_RS26800 () | 85525..86598 | + | 1074 | WP_000950177.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| CRT34_RS26805 () | 86591..87901 | + | 1311 | WP_000476108.1 | ABC transporter substrate-binding protein | - |
| CRT34_RS26810 () | 87960..88268 | - | 309 | Protein_102 | IS4 family transposase ISEc13 | Transposase |
| CRT34_RS26815 () | 88345..88578 | - | 234 | Protein_103 | Tn3 family transposase | - |
| CRT34_RS26820 () | 88600..89652 | - | 1053 | Protein_104 | IS3 family transposase | - |
| CRT34_RS26825 () | 89717..90421 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CRT34_RS26830 () | 90479..91009 | - | 531 | Protein_106 | histidine-type phosphatase | - |
| CRT34_RS26835 () | 91131..91616 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| CRT34_RS26840 () | 91641..92126 | - | 486 | WP_001267177.1 | TlpA family protein disulfide reductase | - |
| CRT34_RS26845 () | 92113..92808 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| CRT34_RS26850 () | 92813..93943 | - | 1131 | WP_000729220.1 | ABC transporter permease | - |
| CRT34_RS26855 () | 93933..95216 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| CRT34_RS26860 () | 95219..96598 | - | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| CRT34_RS26865 () | 96702..97229 | - | 528 | WP_000178050.1 | iron transporter | - |
| CRT34_RS26870 () | 97270..99156 | - | 1887 | WP_000118029.1 | FTR1 family iron permease | - |
| CRT34_RS26880 () | 99503..100318 | - | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| CRT34_RS26885 () | 100544..101248 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CRT34_RS28190 () | 101289..101468 | - | 180 | Protein_117 | recombinase family protein | - |
| CRT34_RS26895 () | 101594..101944 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| CRT34_RS26905 () | 102147..103160 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| CRT34_RS26910 () | 103318..103791 | + | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| CRT34_RS26915 () | 103922..104710 | + | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| CRT34_RS26920 () | 104916..105263 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| CRT34_RS26925 () | 105257..106096 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| CRT34_RS26935 () | 106224..106427 | + | 204 | WP_000376616.1 | hypothetical protein | - |
| CRT34_RS26940 () | 106583..107788 | + | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| CRT34_RS26945 () | 107799..108104 | + | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| CRT34_RS28050 () | 108148..108213 | + | 66 | Protein_127 | EAL domain-containing protein | - |
| CRT34_RS26955 () | 108331..109095 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| CRT34_RS26970 () | 109588..110172 | - | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| CRT34_RS26975 () | 110172..111410 | - | 1239 | WP_000004159.1 | MFS transporter | - |
| CRT34_RS26980 () | 111407..112312 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| CRT34_RS26990 () | 112434..113138 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CRT34_RS26995 () | 113245..114105 | + | 861 | WP_000557452.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| CRT34_RS27000 () | 114118..114660 | + | 543 | WP_002063889.1 | AAA family ATPase | - |
| CRT34_RS27005 () | 114752..115800 | + | 1049 | Protein_135 | IS3 family transposase ISKpn11 | Transposase |
| CRT34_RS27010 () | 115854..116558 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CRT34_RS27015 () | 116623..118866 | - | 2244 | Protein_137 | Tn3 family transposase TnpA_Tn3 | Transposase |
| CRT34_RS27020 () | 118880..119212 | + | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| CRT34_RS27025 () | 119259..120134 | - | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| CRT34_RS27030 () | 120390..121652 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| CRT34_RS28195 () | 121846..121974 | - | 129 | Protein_141 | DUF4158 domain-containing protein | - |
| CRT34_RS27040 () | 122035..122739 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CRT34_RS27045 () | 122793..123233 | - | 441 | Protein_143 | CatB-related O-acetyltransferase | - |
| CRT34_RS27050 () | 123371..124201 | - | 831 | WP_001334766.1 | Beta-lactamase OXA-1 | ARG |
| CRT34_RS27055 () | 124332..124886 | - | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| CRT34_RS27060 () | 125030..125734 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CRT34_RS27065 () | 125800..127314 | + | 1515 | Protein_147 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| CRT34_RS27070 () | 127356..127598 | + | 243 | WP_032140899.1 | hypothetical protein | - |
| CRT34_RS27075 () | 127630..128280 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| CRT34_RS27080 () | 128386..129585 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| CRT34_RS27085 () | 129617..130501 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| CRT34_RS27090 () | 130639..131046 | - | 408 | WP_001214976.1 | cysteine hydrolase | - |
| CRT34_RS27095 () | 131035..131784 | + | 750 | Protein_153 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| CRT34_RS27100 () | 131808..132413 | - | 606 | WP_000509965.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| CRT34_RS27105 () | 132508..135405 | + | 2898 | WP_001553819.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| CRT34_RS27110 () | 135542..135943 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| CRT34_RS27115 () | 135876..136133 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| CRT34_RS27120 () | 136226..136879 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|