MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 131455 bp
Accession: NZ_CP023658 Location: 1..131455 Organism: Acetobacter pomorum strain BDGP5 Replicon: plasmid pApBDGP5A
Accession: NZ_CP023658 Location: 1..131455 Organism: Acetobacter pomorum strain BDGP5 Replicon: plasmid pApBDGP5A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPF11_RS13370 () | 1..927 | - | 927 | WP_050793107.1 | LysR family transcriptional regulator | - |
| CPF11_RS13375 () | 1037..2095 | - | 1059 | WP_100070283.1 | methionine synthase | - |
| CPF11_RS13380 () | 2114..3145 | + | 1032 | WP_010511145.1 | IS110 family transposase ISCc4 | Transposase |
| CPF11_RS13385 () | 3488..4411 | - | 924 | Protein_3 | ParB N-terminal domain-containing protein | - |
| CPF11_RS13390 () | 4598..9724 | - | 5127 | WP_006115743.1 | DEAD/DEAH box helicase family protein | - |
| CPF11_RS13395 () | 10140..10814 | + | 675 | WP_170315289.1 | ParA family protein | - |
| CPF11_RS13400 () | 10811..11509 | + | 699 | WP_019088965.1 | hypothetical protein | - |
| CPF11_RS13405 () | 12240..13163 | - | 924 | WP_006115744.1 | Plasmid Encoded RepA protein | - |
| CPF11_RS13410 () | 13655..15145 | - | 1491 | WP_006115745.1 | tyrosine-type recombinase/integrase | - |
| CPF11_RS13420 () | 15986..17371 | - | 1386 | WP_006115870.1 | IS1380 family transposase IS1380A | Transposase |
| CPF11_RS13425 () | 17465..17836 | - | 372 | Protein_10 | IS5 family transposase ISMex35 | Transposase |
| CPF11_RS13430 () | 17968..19170 | - | 1203 | WP_006117547.1 | porin | - |
| CPF11_RS13435 () | 19157..19456 | - | 300 | WP_019088957.1 | hypothetical protein | - |
| CPF11_RS13445 () | 20223..22445 | - | 2223 | WP_006117546.1 | TonB-dependent receptor | - |
| CPF11_RS13450 () | 22522..23052 | - | 531 | WP_006117545.1 | hypothetical protein | - |
| CPF11_RS13460 () | 23381..24373 | + | 993 | WP_039892090.1 | TonB family protein | - |
| CPF11_RS13465 () | 24617..25273 | + | 657 | Protein_16 | IS5 family transposase ISMex35 | Transposase |
| CPF11_RS13480 () | 26891..27343 | - | 453 | WP_026019419.1 | Rrf2 family transcriptional regulator | - |
| CPF11_RS13485 () | 27432..28748 | + | 1317 | WP_006117537.1 | hypothetical protein | - |
| CPF11_RS14620 () | 28840..31164 | + | 2325 | WP_006117536.1 | cbb3-type cytochrome c oxidase subunit I | - |
| CPF11_RS13495 () | 31171..31536 | + | 366 | WP_010512344.1 | DUF488 family protein | - |
| CPF11_RS13500 () | 31598..31987 | + | 390 | WP_006115869.1 | PAS domain-containing protein | - |
| CPF11_RS13505 () | 31984..32256 | + | 273 | WP_006115868.1 | DUF1971 domain-containing protein | - |
| CPF11_RS13510 () | 32270..32485 | - | 216 | WP_010512346.1 | DUF2945 domain-containing protein | - |
| CPF11_RS13515 () | 32521..33099 | + | 579 | WP_006115867.1 | DUF488 domain-containing protein | - |
| CPF11_RS13520 () | 33298..33783 | + | 486 | WP_082823248.1 | helix-turn-helix domain-containing protein | - |
| CPF11_RS13525 () | 33908..35518 | - | 1611 | WP_006115450.1 | IS66 family transposase ISPpa5 | Transposase |
| CPF11_RS13530 () | 35582..35929 | - | 348 | WP_012812355.1 | IS66 family transposase ISPpa5 | Transposase |
| CPF11_RS13535 () | 35926..36285 | - | 360 | WP_012812356.1 | IS66 family transposase ISPpa5 | Transposase |
| CPF11_RS13540 () | 36384..36803 | - | 420 | Protein_30 | DUF1275 domain-containing protein | - |
| CPF11_RS13545 () | 36803..38065 | - | 1263 | WP_006115449.1 | sodium:proton antiporter | - |
| CPF11_RS13550 () | 38197..38490 | - | 294 | WP_003618711.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| CPF11_RS13555 () | 38487..38747 | - | 261 | WP_003618686.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| CPF11_RS13560 () | 39340..40413 | - | 1074 | WP_006115447.1 | alkene reductase | - |
| CPF11_RS13565 () | 40613..41080 | - | 468 | WP_050793094.1 | hypothetical protein | - |
| CPF11_RS13575 () | 42068..42802 | - | 735 | WP_039891505.1 | class I SAM-dependent methyltransferase | - |
| CPF11_RS13580 () | 42870..43310 | - | 441 | WP_039891503.1 | hypothetical protein | - |
| CPF11_RS13590 () | 44355..46010 | + | 1656 | WP_096884314.1 | DDE-type integrase/transposase/recombinase | - |
| CPF11_RS13595 () | 46049..46936 | + | 888 | WP_100070297.1 | TniB family NTP-binding protein | - |
| CPF11_RS13600 () | 46929..47930 | + | 1002 | WP_006117296.1 | TniQ family protein | - |
| CPF11_RS13610 () | 48535..48924 | + | 390 | WP_039891983.1 | type II toxin-antitoxin system VapC family toxin | - |
| CPF11_RS13615 () | 48966..49697 | - | 732 | WP_006117298.1 | hypothetical protein | - |
| CPF11_RS13625 () | 51159..52085 | + | 927 | Protein_44 | IS701 family transposase IS1452 | Transposase |
| CPF11_RS13630 () | 52126..52499 | + | 374 | Protein_45 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| CPF11_RS13635 () | 52769..53239 | + | 471 | WP_006115451.1 | hypothetical protein | - |
| CPF11_RS13640 () | 53258..54493 | + | 1236 | WP_006115452.1 | TolC family protein | - |
| CPF11_RS13645 () | 54490..55644 | + | 1155 | WP_039891523.1 | efflux RND transporter periplasmic adaptor subunit | - |
| CPF11_RS13650 () | 55644..58718 | + | 3075 | WP_006115454.1 | efflux RND transporter permease subunit | - |
| CPF11_RS13655 () | 58718..59389 | + | 672 | WP_006115455.1 | Transcriptional regulatory protein QseB | VF |
| CPF11_RS13660 () | 59386..60738 | + | 1353 | WP_006115456.1 | HAMP domain-containing histidine kinase | - |
| CPF11_RS13665 () | 60795..61499 | + | 705 | WP_006115457.1 | VIT family protein | - |
| CPF11_RS13670 () | 61983..63203 | + | 1221 | WP_039891527.1 | NarK/NasA family nitrate transporter | - |
| CPF11_RS13675 () | 63237..64894 | + | 1658 | Protein_54 | alginate export family protein | - |
| CPF11_RS13680 () | 64924..67821 | + | 2898 | WP_039891524.1 | nitrite reductase large subunit NirB | - |
| CPF11_RS13685 () | 67829..68413 | + | 585 | Protein_56 | molybdopterin-dependent oxidoreductase | - |
| CPF11_RS13690 () | 68451..69247 | + | 797 | Protein_57 | IS5 family transposase ISMex42 | Transposase |
| CPF11_RS13695 () | 69377..70147 | + | 771 | WP_006115463.1 | DUF1028 domain-containing protein | - |
| CPF11_RS13700 () | 70207..71466 | + | 1260 | WP_012813251.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| CPF11_RS13705 () | 71466..72947 | + | 1482 | WP_006115465.1 | aldehyde dehydrogenase | - |
| CPF11_RS13710 () | 73085..73492 | + | 408 | WP_003630593.1 | enamine deaminase RidA | - |
| CPF11_RS13715 () | 73615..75009 | + | 1395 | WP_003630594.1 | cytosine permease | - |
| CPF11_RS13720 () | 75009..76625 | + | 1617 | WP_006117385.1 | GMC family oxidoreductase N-terminal domain-containing protein | - |
| CPF11_RS13725 () | 76622..77776 | + | 1155 | WP_006117386.1 | acetylornithine deacetylase | - |
| CPF11_RS13730 () | 77871..78797 | + | 927 | WP_006117387.1 | LysR family transcriptional regulator | - |
| CPF11_RS13735 () | 79122..80618 | + | 1497 | WP_006117388.1 | outer membrane beta-barrel protein | - |
| CPF11_RS13745 () | 80765..81975 | + | 1211 | WP_096884248.1 | IS3 family transposase ISAzsp1 | Transposase |
| CPF11_RS13750 () | 82042..82923 | - | 882 | Protein_68 | IS701 family transposase IS1452 | Transposase |
| CPF11_RS13755 () | 83115..83888 | + | 774 | WP_003631418.1 | TSUP family transporter | - |
| CPF11_RS13760 () | 84202..84680 | - | 479 | Protein_70 | recombinase family protein | - |
| CPF11_RS13765 () | 84805..84915 | + | 111 | WP_063355033.1 | transposase | - |
| CPF11_RS13770 () | 84912..85708 | - | 797 | Protein_72 | IS5 family transposase ISMex42 | Transposase |
| CPF11_RS13775 () | 85749..86737 | + | 989 | Protein_73 | IS3 family transposase ISPam3 | Transposase |
| CPF11_RS13780 () | 86785..87558 | + | 774 | Protein_74 | Conjugal transfer protein TraG | VF |
| CPF11_RS13785 () | 87625..87774 | - | 150 | WP_007397858.1 | DUF2474 domain-containing protein | - |
| CPF11_RS13790 () | 87761..88780 | - | 1020 | WP_006115550.1 | cytochrome d ubiquinol oxidase subunit II | - |
| CPF11_RS13795 () | 88783..90216 | - | 1434 | WP_006115551.1 | cytochrome ubiquinol oxidase subunit I | - |
| CPF11_RS13805 () | 90652..91611 | - | 960 | WP_035350857.1 | IS481 family transposase | - |
| CPF11_RS13810 () | 91669..91929 | + | 261 | Protein_79 | hypothetical protein | - |
| CPF11_RS13815 () | 92002..92274 | + | 273 | WP_006115552.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| CPF11_RS13820 () | 92271..92579 | + | 309 | WP_006115553.1 | PIN domain-containing protein | Toxin Detail |
| CPF11_RS13825 () | 92678..92932 | + | 255 | WP_006115554.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| CPF11_RS13830 () | 92934..93263 | + | 330 | WP_012813213.1 | endoribonuclease MazF | Toxin Detail |
| CPF11_RS13835 () | 93320..93520 | + | 201 | WP_012813212.1 | hypothetical protein | - |
| CPF11_RS13840 () | 93550..93870 | + | 321 | WP_012813211.1 | hypothetical protein | - |
| CPF11_RS13845 () | 93927..94331 | - | 405 | WP_006115557.1 | hypothetical protein | - |
| CPF11_RS13850 () | 94344..95159 | - | 816 | WP_006115558.1 | hypothetical protein | - |
| CPF11_RS13855 () | 95256..95720 | - | 465 | WP_039891560.1 | hypothetical protein | - |
| CPF11_RS13860 () | 95723..96571 | - | 849 | WP_039891563.1 | hypothetical protein | - |
| CPF11_RS13865 () | 96688..97476 | - | 789 | WP_006115561.1 | hypothetical protein | - |
| CPF11_RS13870 () | 97787..98497 | + | 711 | WP_006115562.1 | phage antirepressor | - |
| CPF11_RS13875 () | 98593..98871 | + | 279 | WP_006115563.1 | HU family DNA-binding protein | - |
| CPF11_RS13880 () | 98950..99168 | + | 219 | WP_170315285.1 | WGR domain-containing protein | - |
| CPF11_RS13885 () | 99399..100478 | - | 1080 | WP_006115564.1 | IS5 family transposase ISMex35 | Transposase |
| CPF11_RS13890 () | 100915..101334 | + | 420 | WP_006115565.1 | nucleotidyltransferase domain-containing protein | - |
| CPF11_RS13895 () | 101300..101791 | + | 492 | WP_006115566.1 | hypothetical protein | - |
| CPF11_RS13900 () | 101791..102834 | + | 1044 | WP_039891567.1 | winged helix-turn-helix domain-containing protein | - |
| CPF11_RS13910 () | 103066..104025 | + | 960 | WP_035350857.1 | IS481 family transposase | - |
| CPF11_RS13915 () | 104344..104982 | + | 639 | WP_006115571.1 | HPP family protein | - |
| CPF11_RS13920 () | 105016..105480 | - | 465 | WP_082823244.1 | helix-turn-helix domain-containing protein | - |
| CPF11_RS13925 () | 105679..106257 | - | 579 | WP_006115867.1 | DUF488 domain-containing protein | - |
| CPF11_RS13930 () | 106293..106508 | + | 216 | WP_010512346.1 | DUF2945 domain-containing protein | - |
| CPF11_RS13935 () | 106522..106794 | - | 273 | WP_006115868.1 | DUF1971 domain-containing protein | - |
| CPF11_RS13940 () | 106791..107180 | - | 390 | WP_006115869.1 | PAS domain-containing protein | - |
| CPF11_RS13945 () | 107242..107607 | - | 366 | WP_010512344.1 | DUF488 family protein | - |
| CPF11_RS13950 () | 107624..108421 | - | 798 | Protein_106 | IS5 family transposase ISMex42 | Transposase |
| CPF11_RS13955 () | 108555..109736 | - | 1182 | WP_006116385.1 | glutathione-dependent formaldehyde dehydrogenase | - |
| CPF11_RS13960 () | 110555..110878 | + | 324 | WP_006116386.1 | IS3 family transposase IS868 | Transposase |
| CPF11_RS13965 () | 110875..111114 | + | 240 | WP_096884313.1 | IS3 family transposase IS51 | Transposase |
| CPF11_RS13970 () | 111131..112516 | + | 1386 | WP_006115870.1 | IS1380 family transposase IS1380A | Transposase |
| CPF11_RS13975 () | 112700..113434 | + | 735 | Protein_111 | IS3 family transposase ISHne1 | Transposase |
| CPF11_RS13980 () | 113423..113731 | - | 309 | WP_081937143.1 | DUF1348 family protein | - |
| CPF11_RS13985 () | 113891..115276 | - | 1386 | WP_006115870.1 | IS1380 family transposase IS1380A | Transposase |
| CPF11_RS13990 () | 115293..115535 | - | 243 | WP_081937144.1 | DUF1348 family protein | - |
| CPF11_RS13995 () | 115477..115644 | + | 168 | Protein_115 | transposase | - |
| CPF11_RS14000 () | 115660..116162 | - | 503 | Protein_116 | delta(1)-pyrroline-2-carboxylate reductase family protein | - |
| CPF11_RS14005 () | 116460..117053 | + | 594 | WP_035350860.1 | TetR/AcrR family transcriptional regulator | - |
| CPF11_RS14010 () | 117141..118298 | + | 1158 | WP_003631147.1 | iron-containing alcohol dehydrogenase | - |
| CPF11_RS14015 () | 118383..119774 | + | 1392 | WP_003631146.1 | NAD-dependent succinate-semialdehyde dehydrogenase | - |
| CPF11_RS14020 () | 120021..120980 | - | 960 | WP_035350857.1 | IS481 family transposase | - |
| CPF11_RS14030 () | 121179..122429 | + | 1251 | WP_012812328.1 | IS701 family transposase IS1452 | Transposase |
| CPF11_RS14035 () | 122547..122828 | - | 282 | Protein_122 | restriction endonuclease subunit S | - |
| CPF11_RS14040 () | 122899..123219 | - | 321 | WP_006115724.1 | nucleotidyltransferase domain-containing protein | - |
| CPF11_RS14045 () | 123216..123617 | - | 402 | WP_012813241.1 | nucleotidyltransferase substrate binding protein | - |
| CPF11_RS14050 () | 123617..125230 | - | 1614 | WP_006115727.1 | type I restriction-modification system subunit M | - |
| CPF11_RS14055 () | 125673..126026 | + | 354 | WP_006115729.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| CPF11_RS14060 () | 126023..126445 | + | 423 | WP_006115730.1 | arsenate reductase (glutaredoxin) | - |
| CPF11_RS14065 () | 126442..127740 | + | 1299 | WP_170315290.1 | arsenic transporter | - |
| CPF11_RS14070 () | 127764..128462 | + | 699 | WP_012813274.1 | arsenical resistance protein ArsH | - |
| CPF11_RS14075 () | 128471..129550 | + | 1080 | WP_012813273.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| CPF11_RS14080 () | 129864..130205 | + | 342 | WP_012813272.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CPF11_RS14085 () | 130202..130498 | + | 297 | WP_006115735.1 | helix-turn-helix domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|