MGE detailed information
MGE type: Prophage MGE length: 55804 bp
Accession: NZ_CP023561 Location: 2312472..2368275 Organism: Staphylococcus aureus strain TF3198 Replicon: chromosome
Accession: NZ_CP023561 Location: 2312472..2368275 Organism: Staphylococcus aureus strain TF3198 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPC18_RS11805 () | 2308657..2310711 | - | 2055 | WP_000669720.1 | extracellular adherence protein Eap/Map | - |
| CPC18_RS11810 () | 2311097..2311347 | + | 251 | Protein_2189 | sphingomyelin phosphodiesterase | - |
| CPC18_RS11815 () | 2311669..2311848 | + | 180 | WP_000669791.1 | hypothetical protein | - |
| CPC18_RS11825 () | 2312159..2312419 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| CPC18_RS11830 () | 2312472..2312822 | - | 351 | WP_000702263.1 | Staphylococcal complement inhibitor | VF |
| CPC18_RS11835 () | 2313333..2313668 | - | 336 | Protein_2193 | SH3 domain-containing protein | - |
| CPC18_RS11855 () | 2314319..2314810 | - | 492 | WP_000920038.1 | Staphylokinase | VF |
| CPC18_RS11860 () | 2315001..2315756 | - | 756 | WP_148121298.1 | CHAP domain-containing protein | - |
| CPC18_RS11865 () | 2315768..2316022 | - | 255 | WP_000611512.1 | phage holin | - |
| CPC18_RS11870 () | 2316074..2316181 | + | 108 | WP_031762631.1 | hypothetical protein | - |
| - () | 2316103..2316242 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2316103..2316242 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2316103..2316242 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2316103..2316242 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| CPC18_RS11875 () | 2316234..2316410 | - | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| CPC18_RS11880 () | 2316613..2317386 | - | 774 | WP_025174055.1 | Enterotoxin type E | VF |
| CPC18_RS11885 () | 2317807..2318181 | - | 375 | WP_000340977.1 | hypothetical protein | - |
| CPC18_RS11890 () | 2318237..2318524 | - | 288 | WP_001040255.1 | hypothetical protein | - |
| CPC18_RS11895 () | 2318571..2318723 | - | 153 | WP_000654329.1 | hypothetical protein | - |
| CPC18_RS11900 () | 2318713..2322498 | - | 3786 | WP_148121299.1 | hypothetical protein | - |
| CPC18_RS11905 () | 2322514..2323998 | - | 1485 | WP_000567393.1 | phage tail family protein | - |
| CPC18_RS11910 () | 2323995..2328539 | - | 4545 | WP_000504557.1 | phage tail tape measure protein | - |
| CPC18_RS14680 () | 2328596..2328733 | - | 138 | WP_001549167.1 | hypothetical protein | - |
| CPC18_RS11915 () | 2328784..2329134 | - | 351 | WP_001096355.1 | hypothetical protein | - |
| CPC18_RS11920 () | 2329184..2329408 | - | 225 | WP_071621395.1 | Ig-like domain-containing protein | - |
| CPC18_RS11925 () | 2329450..2330094 | - | 645 | WP_000268735.1 | phage tail protein | - |
| CPC18_RS11930 () | 2330095..2330502 | - | 408 | WP_000565498.1 | hypothetical protein | - |
| CPC18_RS11935 () | 2330499..2330903 | - | 405 | WP_000114226.1 | HK97 gp10 family phage protein | - |
| CPC18_RS11940 () | 2330900..2331262 | - | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| CPC18_RS11945 () | 2331246..2331530 | - | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| CPC18_RS11950 () | 2331520..2331804 | - | 285 | WP_000238236.1 | hypothetical protein | - |
| CPC18_RS11955 () | 2331824..2332969 | - | 1146 | WP_000154559.1 | phage major capsid protein | - |
| CPC18_RS11960 () | 2332993..2333730 | - | 738 | WP_000642727.1 | Clp protease ClpP | - |
| CPC18_RS11965 () | 2333714..2334901 | - | 1188 | WP_000025274.1 | phage portal protein | - |
| CPC18_RS11970 () | 2334917..2336578 | - | 1662 | WP_148121300.1 | terminase large subunit | - |
| CPC18_RS11975 () | 2336575..2336919 | - | 345 | WP_000402904.1 | hypothetical protein | - |
| CPC18_RS11980 () | 2337049..2337348 | - | 300 | WP_000988336.1 | HNH endonuclease | - |
| CPC18_RS11985 () | 2337580..2337996 | - | 417 | WP_000590122.1 | hypothetical protein | - |
| CPC18_RS11990 () | 2338024..2338224 | - | 201 | WP_000265043.1 | DUF1514 family protein | - |
| CPC18_RS11995 () | 2338224..2338373 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| CPC18_RS12000 () | 2338370..2338756 | - | 387 | WP_000592207.1 | hypothetical protein | - |
| CPC18_RS12005 () | 2338753..2338959 | - | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| CPC18_RS12010 () | 2338956..2339201 | - | 246 | WP_001282074.1 | hypothetical protein | - |
| CPC18_RS12015 () | 2339238..2339774 | - | 537 | WP_001066447.1 | dUTP diphosphatase | - |
| CPC18_RS12020 () | 2339767..2340015 | - | 249 | WP_001065094.1 | DUF1024 family protein | - |
| CPC18_RS12025 () | 2340030..2340272 | - | 243 | WP_000131370.1 | hypothetical protein | - |
| CPC18_RS12030 () | 2340276..2340644 | - | 369 | WP_000101288.1 | hypothetical protein | - |
| CPC18_RS12035 () | 2340657..2341061 | - | 405 | WP_000401960.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CPC18_RS12040 () | 2341070..2341288 | - | 219 | WP_000338530.1 | hypothetical protein | - |
| CPC18_RS12045 () | 2341295..2342188 | - | 894 | WP_000148321.1 | DnaD domain-containing protein | - |
| CPC18_RS12050 () | 2342218..2342688 | - | 471 | WP_000934760.1 | single-stranded DNA-binding protein | - |
| CPC18_RS12055 () | 2342689..2343306 | - | 618 | WP_071665632.1 | MBL fold metallo-hydrolase | - |
| CPC18_RS12060 () | 2343387..2344307 | - | 921 | WP_000138475.1 | recombinase RecT | - |
| CPC18_RS12065 () | 2344309..2346252 | - | 1944 | WP_000700555.1 | AAA family ATPase | - |
| CPC18_RS12070 () | 2346261..2346524 | - | 264 | WP_001205732.1 | hypothetical protein | - |
| CPC18_RS12075 () | 2346533..2346793 | - | 261 | WP_000291510.1 | DUF1108 family protein | - |
| CPC18_RS12080 () | 2346798..2347100 | - | 303 | WP_000165371.1 | DUF2482 family protein | - |
| CPC18_RS12085 () | 2347195..2347356 | - | 162 | WP_000048129.1 | DUF1270 family protein | - |
| CPC18_RS12090 () | 2347353..2347676 | - | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| CPC18_RS12095 () | 2347731..2348111 | + | 381 | WP_000762521.1 | DUF2513 domain-containing protein | - |
| CPC18_RS12100 () | 2348098..2348295 | - | 198 | WP_001148862.1 | hypothetical protein | - |
| CPC18_RS12105 () | 2348311..2349063 | - | 753 | WP_001148605.1 | phage antirepressor KilAC domain-containing protein | - |
| CPC18_RS12110 () | 2349114..2349443 | + | 330 | WP_000128907.1 | hypothetical protein | - |
| CPC18_RS12115 () | 2349432..2349647 | - | 216 | WP_001025404.1 | DUF2829 domain-containing protein | - |
| CPC18_RS12120 () | 2349663..2349926 | - | 264 | WP_000854072.1 | helix-turn-helix domain-containing protein | - |
| CPC18_RS12125 () | 2349923..2350096 | - | 174 | WP_001801500.1 | hypothetical protein | - |
| CPC18_RS12130 () | 2350059..2350772 | + | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| CPC18_RS12135 () | 2350788..2351720 | + | 933 | WP_000759682.1 | ATP-dependent helicase | - |
| CPC18_RS12140 () | 2351726..2352067 | + | 342 | WP_000591749.1 | hypothetical protein | - |
| CPC18_RS12145 () | 2352271..2352453 | + | 183 | WP_000705248.1 | hypothetical protein | - |
| CPC18_RS12150 () | 2352554..2353018 | + | 465 | WP_000825947.1 | hypothetical protein | - |
| CPC18_RS12155 () | 2353077..2354114 | + | 1038 | WP_000857191.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CPC18_RS12160 () | 2354171..2354995 | + | 825 | Protein_2256 | Phospholipase C | VF |
| CPC18_RS12165 () | 2355233..2356249 | - | 1017 | WP_000595324.1 | putative leukocidin-like protein 1 | VF |
| CPC18_RS12170 () | 2356271..2357326 | - | 1056 | WP_000791407.1 | putative leukocidin-like protein 2 | VF |
| CPC18_RS12175 () | 2357761..2358984 | + | 1224 | WP_000206638.1 | ArgE/DapE family deacylase | - |
| CPC18_RS12180 () | 2359356..2360201 | - | 846 | WP_000812008.1 | class I SAM-dependent methyltransferase | - |
| CPC18_RS12185 () | 2360263..2361174 | - | 912 | WP_061823925.1 | Iron(3+)-hydroxamate-binding protein FhuD | VF |
| CPC18_RS12190 () | 2361335..2362642 | + | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| CPC18_RS12200 () | 2363495..2363938 | - | 444 | WP_000022887.1 | GNAT family N-acetyltransferase | - |
| CPC18_RS12205 () | 2364103..2364480 | - | 378 | WP_001797573.1 | hypothetical protein | - |
| CPC18_RS12210 () | 2364798..2365388 | - | 591 | WP_001293058.1 | terminase small subunit | - |
| CPC18_RS12215 () | 2365385..2365597 | - | 213 | WP_000128898.1 | hypothetical protein | - |
| CPC18_RS12220 () | 2365658..2366204 | + | 547 | Protein_2267 | site-specific integrase | - |
| CPC18_RS12225 () | 2366299..2367915 | - | 1617 | WP_000240645.1 | 60 kDa chaperonin | VF |
| CPC18_RS12230 () | 2367991..2368275 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| CPC18_RS12235 () | 2368450..2369193 | + | 744 | WP_000197635.1 | CPBP family intramembrane metalloprotease | - |
| CPC18_RS12240 () | 2369218..2370327 | - | 1110 | WP_148121301.1 | hypothetical protein | - |
| CPC18_RS12245 () | 2370524..2371150 | + | 627 | WP_000522384.1 | nitroreductase family protein | - |
| CPC18_RS12250 () | 2371511..2372296 | + | 786 | WP_000867960.1 | carbon-nitrogen family hydrolase | - |
| CPC18_RS12255 () | 2372893..2373027 | - | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus str. Newman | Prophage | TA22266, TA22270 | NC_009641 | 2089433..2146383 | 0.009 |