MGE detailed information
MGE type: Genomic_island MGE length: 28157 bp
Accession: NZ_CP023388 Location: 4560636..4588792 Organism: Escherichia coli strain 1105 Replicon: chromosome
Accession: NZ_CP023388 Location: 4560636..4588792 Organism: Escherichia coli strain 1105 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CNQ47_RS23370 () | 4555772..4556269 | - | 498 | WP_001536527.1 | type VI secretion system contractile sheath small subunit | - |
| CNQ47_RS23375 () | 4556767..4556979 | + | 213 | WP_024191634.1 | DUF4222 domain-containing protein | - |
| CNQ47_RS23380 () | 4556999..4557232 | - | 234 | WP_001536525.1 | hypothetical protein | - |
| CNQ47_RS23385 () | 4557328..4557951 | - | 624 | WP_001683580.1 | hypothetical protein | - |
| CNQ47_RS23390 () | 4558117..4558287 | - | 171 | Protein_4274 | Rpn family recombination-promoting nuclease/putative transposase | - |
| CNQ47_RS26900 () | 4558366..4558583 | - | 218 | Protein_4275 | hypothetical protein | - |
| CNQ47_RS23395 () | 4559008..4559487 | + | 480 | WP_001536522.1 | ProQ/FinO family protein | - |
| CNQ47_RS23400 () | 4559506..4560054 | - | 549 | WP_001536521.1 | hypothetical protein | - |
| CNQ47_RS23405 () | 4560334..4560567 | - | 234 | WP_001536520.1 | AlpA family transcriptional regulator | - |
| CNQ47_RS23410 () | 4560636..4561211 | - | 576 | WP_001536519.1 | hypothetical protein | - |
| CNQ47_RS23415 () | 4561458..4562024 | - | 567 | WP_001683581.1 | inovirus-type Gp2 protein | - |
| CNQ47_RS23425 () | 4563105..4565153 | - | 2049 | WP_000792546.1 | TonB-dependent siderophore receptor IreA | - |
| CNQ47_RS23430 () | 4565932..4566663 | - | 732 | WP_001536517.1 | inovirus Gp2 family protein | - |
| CNQ47_RS26745 () | 4566844..4567017 | + | 174 | WP_012139175.1 | hypothetical protein | - |
| CNQ47_RS23440 () | 4568613..4569467 | + | 855 | WP_001536516.1 | hypothetical protein | - |
| CNQ47_RS23445 () | 4569464..4570426 | - | 963 | WP_001536515.1 | hypothetical protein | - |
| CNQ47_RS23450 () | 4570532..4571416 | + | 885 | WP_001536514.1 | 50S ribosome-binding GTPase | - |
| CNQ47_RS23455 () | 4571535..4572212 | + | 678 | WP_016237389.1 | hypothetical protein | - |
| CNQ47_RS23460 () | 4572218..4572421 | + | 204 | WP_016237390.1 | DUF905 family protein | - |
| CNQ47_RS23465 () | 4572541..4573359 | + | 819 | WP_096057995.1 | DUF945 domain-containing protein | - |
| CNQ47_RS23470 () | 4573450..4573935 | + | 486 | WP_096057996.1 | antirestriction protein | - |
| CNQ47_RS23480 () | 4573950..4574426 | + | 477 | WP_001186774.1 | RadC family protein | - |
| CNQ47_RS23485 () | 4574495..4574716 | + | 222 | WP_001552746.1 | DUF987 domain-containing protein | - |
| CNQ47_RS23490 () | 4574790..4575167 | + | 378 | WP_001536509.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CNQ47_RS23495 () | 4575213..4575587 | + | 375 | WP_000854831.1 | type IV toxin-antitoxin system toxin CbtA | Toxin Detail |
| CNQ47_RS23500 () | 4575584..4576075 | + | 492 | WP_001683023.1 | hypothetical protein | - |
| CNQ47_RS23505 () | 4576087..4576284 | + | 198 | WP_021531598.1 | DUF957 domain-containing protein | - |
| CNQ47_RS23510 () | 4576369..4577214 | + | 846 | Protein_4297 | DUF4942 domain-containing protein | - |
| CNQ47_RS23515 () | 4577283..4577678 | + | 396 | WP_001536505.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| CNQ47_RS23520 () | 4577671..4578618 | + | 948 | WP_001536504.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| CNQ47_RS23530 () | 4579441..4580979 | + | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| CNQ47_RS23540 () | 4581345..4582679 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| CNQ47_RS23545 () | 4582759..4584906 | + | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| CNQ47_RS23550 () | 4584965..4586422 | + | 1458 | WP_000856825.1 | dipeptide/tripeptide permease DtpC | - |
| CNQ47_RS23555 () | 4586659..4588176 | + | 1518 | WP_000003805.1 | lysine--tRNA ligase | - |
| CNQ47_RS23560 () | 4588295..4588468 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| CNQ47_RS23565 () | 4588496..4588792 | - | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| CNQ47_RS23570 () | 4589021..4589293 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| CNQ47_RS23575 () | 4589305..4589535 | - | 231 | WP_001683478.1 | (4Fe-4S)-binding protein | - |
| CNQ47_RS23580 () | 4589716..4591347 | + | 1632 | WP_001216466.1 | sensor histidine kinase | - |
| CNQ47_RS23585 () | 4591344..4592063 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|