MGE detailed information
MGE type: Conjugative plasmid MGE length: 87770 bp
Accession: NZ_CP023385 Location: 1..87770 Organism: Escherichia coli strain 1223 Replicon: plasmid p87
Accession: NZ_CP023385 Location: 1..87770 Organism: Escherichia coli strain 1223 Replicon: plasmid p87
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CNQ49_RS25305 () | 1..1032 | + | 1032 | WP_000907874.1 | replication initiation protein | - |
| CNQ49_RS25315 () | 1791..2990 | - | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| CNQ49_RS25320 () | 3000..3188 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| CNQ49_RS25325 () | 3585..4730 | + | 1146 | WP_000976514.1 | Beta-lactamase | ARG |
| CNQ49_RS25330 () | 4824..5357 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| CNQ49_RS25335 () | 5354..5671 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| CNQ49_RS25345 () | 6531..7634 | + | 1104 | WP_040028050.1 | colicin transporter | - |
| CNQ49_RS25350 () | 7651..7986 | - | 336 | WP_001080730.1 | colicin 1A immunity protein | - |
| CNQ49_RS25360 () | 8115..8462 | + | 348 | WP_000142441.1 | hypothetical protein | - |
| CNQ49_RS25365 () | 8480..9070 | - | 591 | WP_000194573.1 | hypothetical protein | - |
| CNQ49_RS25370 () | 9070..9327 | - | 258 | WP_000371885.1 | hypothetical protein | - |
| CNQ49_RS25375 () | 9985..10269 | + | 285 | WP_001331078.1 | hypothetical protein | - |
| CNQ49_RS25380 () | 10262..10951 | + | 690 | WP_000796232.1 | hypothetical protein | - |
| CNQ49_RS25385 () | 10948..11736 | + | 789 | WP_000016498.1 | site-specific integrase | - |
| CNQ49_RS25390 () | 11916..12560 | + | 645 | WP_001144036.1 | ParA family protein | - |
| CNQ49_RS25395 () | 12647..12955 | + | 309 | WP_000048808.1 | hypothetical protein | - |
| CNQ49_RS25400 () | 13369..14349 | + | 981 | WP_000688519.1 | plasmid segregation protein ParM | - |
| CNQ49_RS25405 () | 14342..14758 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| CNQ49_RS25410 () | 14760..16034 | - | 1275 | WP_000457524.1 | Y-family DNA polymerase | - |
| CNQ49_RS25415 () | 16034..16471 | - | 438 | WP_000109072.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CNQ49_RS25420 () | 16468..16716 | - | 249 | WP_000618111.1 | DinI-like family protein | - |
| CNQ49_RS25430 () | 17134..18036 | + | 903 | WP_000273912.1 | DUF1281 domain-containing protein | - |
| CNQ49_RS25435 () | 18033..18344 | + | 312 | WP_014640311.1 | hypothetical protein | - |
| CNQ49_RS25440 () | 18420..19103 | + | 684 | WP_000086121.1 | DNA methylase | - |
| CNQ49_RS25445 () | 19104..19325 | + | 222 | WP_001104893.1 | hypothetical protein | - |
| CNQ49_RS25450 () | 19339..19773 | + | 435 | WP_000274493.1 | DUF1380 family protein | - |
| CNQ49_RS26495 () | 19824..20600 | + | 777 | WP_024135924.1 | hypothetical protein | - |
| CNQ49_RS25465 () | 21141..21443 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| CNQ49_RS25470 () | 21490..21912 | + | 423 | WP_000271763.1 | DUF1380 family protein | - |
| CNQ49_RS25475 () | 21909..22100 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| CNQ49_RS26500 () | 22434..22502 | - | 69 | Protein_30 | pilus protein | - |
| CNQ49_RS25490 () | 22871..23398 | + | 528 | WP_001276114.1 | single-stranded DNA-binding protein | - |
| CNQ49_RS25495 () | 23456..23689 | + | 234 | WP_000005985.1 | DUF905 family protein | - |
| CNQ49_RS25500 () | 23748..25706 | + | 1959 | WP_001145462.1 | ParB/RepB/Spo0J family partition protein | - |
| CNQ49_RS25505 () | 25761..26195 | + | 435 | WP_000845904.1 | conjugation system SOS inhibitor PsiB | - |
| CNQ49_RS25510 () | 26192..26911 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| CNQ49_RS25515 () | 26908..27504 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| CNQ49_RS25525 () | 27967..28467 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| CNQ49_RS25540 () | 29196..29630 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| CNQ49_RS25545 () | 29724..29990 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| CNQ49_RS25550 () | 30055..30945 | + | 891 | WP_000038332.1 | Recombination-promoting nuclease RpnA | VF |
| CNQ49_RS25555 () | 30945..31190 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| CNQ49_RS25560 () | 31221..31472 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| CNQ49_RS25575 () | 32053..32901 | + | 849 | WP_001077021.1 | DUF4942 domain-containing protein | - |
| CNQ49_RS25580 () | 32987..33322 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| CNQ49_RS25585 () | 33556..33888 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| CNQ49_RS25590 () | 33899..36598 | + | 2700 | WP_010891268.1 | Protein TraI | Relaxase |
| CNQ49_RS25595 () | 36635..38926 | - | 2292 | WP_001289276.1 | hypothetical protein | - |
| CNQ49_RS25600 () | 38919..39989 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| CNQ49_RS25605 () | 40008..41216 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 41396..41458 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 41396..41458 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 41396..41458 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 41396..41458 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| CNQ49_RS25610 () | 41508..41660 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| CNQ49_RS25615 () | 41732..41983 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| CNQ49_RS26505 () | 42642..42818 | - | 177 | WP_001054897.1 | hypothetical protein | - |
| CNQ49_RS25620 () | 43210..43419 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| CNQ49_RS25625 () | 43491..44141 | - | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| CNQ49_RS25630 () | 44215..46383 | - | 2169 | WP_000698357.1 | DotA/TraY family protein | - |
| CNQ49_RS25635 () | 46480..47064 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| CNQ49_RS25640 () | 47093..48295 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| CNQ49_RS25645 () | 48262..48876 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| CNQ49_RS25650 () | 48876..51920 | - | 3045 | WP_001024782.1 | IncI1-type conjugal transfer protein TraU | - |
| CNQ49_RS25655 () | 52010..52810 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| CNQ49_RS25660 () | 52794..52982 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| CNQ49_RS25665 () | 53046..53450 | - | 405 | WP_000086959.1 | IncI1-type conjugal transfer protein TraR | - |
| CNQ49_RS25670 () | 53501..54028 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| CNQ49_RS25675 () | 54028..54732 | - | 705 | WP_000801919.1 | IncI1-type conjugal transfer protein TraP | - |
| CNQ49_RS25680 () | 54732..56021 | - | 1290 | WP_001272003.1 | conjugal transfer protein TraO | - |
| CNQ49_RS25685 () | 56024..57007 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| CNQ49_RS25690 () | 57018..57710 | - | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| CNQ49_RS25695 () | 57707..58054 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| CNQ49_RS25700 () | 58072..61839 | - | 3768 | WP_001141527.1 | DNA primase | - |
| CNQ49_RS25705 () | 61929..62480 | - | 552 | WP_000014583.1 | Phospholipase D | VF |
| CNQ49_RS25710 () | 62495..62785 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| CNQ49_RS25715 () | 62782..63930 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| CNQ49_RS25720 () | 63927..64745 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| CNQ49_RS25725 () | 64742..65200 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| CNQ49_RS25730 () | 65595..66179 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| CNQ49_RS25735 () | 66239..67441 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| CNQ49_RS25740 () | 67526..68350 | - | 825 | WP_001238939.1 | hypothetical protein | - |
| CNQ49_RS25745 () | 68501..69655 | - | 1155 | WP_001139957.1 | integrase | - |
| CNQ49_RS25765 () | 70890..71066 | + | 177 | WP_096040819.1 | shufflon protein C' | - |
| CNQ49_RS25775 () | 71334..72704 | - | 1371 | WP_001393542.1 | hypothetical protein | VF |
| CNQ49_RS25780 () | 72704..73360 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| CNQ49_RS25785 () | 73345..73905 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| CNQ49_RS25790 () | 73915..74529 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| CNQ49_RS25795 () | 74547..75644 | - | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| CNQ49_RS25800 () | 75657..77210 | - | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| CNQ49_RS25805 () | 77221..77673 | - | 453 | WP_001247336.1 | hypothetical protein | VF |
| CNQ49_RS25810 () | 77660..78955 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| CNQ49_RS25815 () | 78948..80630 | - | 1683 | WP_032311054.1 | Outer membrane lipoprotein BfpB | VF |
| CNQ49_RS25820 () | 80644..81081 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| CNQ49_RS25825 () | 81081..82147 | - | 1067 | Protein_90 | hypothetical protein | VF |
| CNQ49_RS25840 () | 82821..83273 | - | 453 | WP_000008892.1 | hypothetical protein | - |
| CNQ49_RS25845 () | 83316..83570 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| CNQ49_RS25850 () | 83838..84404 | - | 567 | WP_000776428.1 | hypothetical protein | - |
| CNQ49_RS25855 () | 84418..85101 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| CNQ49_RS25865 () | 85355..85888 | - | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| CNQ49_RS25875 () | 86330..86617 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| CNQ49_RS25880 () | 86535..86798 | - | 264 | WP_001324596.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli | Conjugative plasmid | TA10119, TA30466 | NC_025198 | 1..92339 | 0.005 |