MGE detailed information
MGE type: Conjugative plasmid MGE length: 92420 bp
Accession: NZ_CP023376 Location: 1..92420 Organism: Escherichia coli strain 1283 Replicon: plasmid p92
Accession: NZ_CP023376 Location: 1..92420 Organism: Escherichia coli strain 1283 Replicon: plasmid p92
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CNQ51_RS25140 () | 1..1032 | + | 1032 | WP_000907875.1 | replication initiation protein | - |
| CNQ51_RS25160 () | 2193..3401 | - | 1209 | WP_000198533.1 | IS91 family transposase ISSbo1 | Transposase |
| CNQ51_RS25165 () | 3382..3654 | - | 273 | WP_000019163.1 | hypothetical protein | - |
| CNQ51_RS25170 () | 3732..3899 | + | 168 | Protein_3 | transposase | - |
| CNQ51_RS25175 () | 4223..5368 | + | 1146 | WP_000976514.1 | Beta-lactamase | ARG |
| CNQ51_RS25180 () | 5462..5995 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| CNQ51_RS25185 () | 5992..6309 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| CNQ51_RS25195 () | 7037..8323 | + | 1287 | Protein_7 | DUF4165 domain-containing protein | - |
| CNQ51_RS25200 () | 8470..9072 | - | 603 | WP_000517692.1 | hypothetical protein | - |
| CNQ51_RS25210 () | 9426..10772 | + | 1347 | WP_001132033.1 | hypothetical protein | - |
| CNQ51_RS25220 () | 11051..12931 | + | 1881 | WP_001283344.1 | colicin 1A | - |
| CNQ51_RS25225 () | 12953..13288 | - | 336 | WP_001080735.1 | hypothetical protein | - |
| CNQ51_RS25235 () | 13417..13764 | + | 348 | WP_000142451.1 | hypothetical protein | - |
| CNQ51_RS25240 () | 13784..14374 | - | 591 | WP_000194576.1 | hypothetical protein | - |
| CNQ51_RS25245 () | 14374..14631 | - | 258 | WP_000343085.1 | hypothetical protein | - |
| CNQ51_RS25255 () | 15199..15612 | + | 414 | WP_000465043.1 | hypothetical protein | - |
| CNQ51_RS25260 () | 15614..16393 | + | 780 | WP_001164201.1 | site-specific integrase | - |
| CNQ51_RS25265 () | 16573..17217 | + | 645 | WP_001144036.1 | ParA family protein | - |
| CNQ51_RS25270 () | 17304..17612 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| CNQ51_RS25275 () | 18026..19006 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| CNQ51_RS25280 () | 18999..19415 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| CNQ51_RS25285 () | 19417..20691 | - | 1275 | WP_000457524.1 | Y-family DNA polymerase | - |
| CNQ51_RS25290 () | 20691..21128 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CNQ51_RS25295 () | 21125..21373 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| CNQ51_RS25305 () | 21791..22693 | + | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| CNQ51_RS25310 () | 22690..23001 | + | 312 | WP_031942433.1 | hypothetical protein | - |
| CNQ51_RS25315 () | 23077..23760 | + | 684 | WP_000086147.1 | DNA methylase | - |
| CNQ51_RS25320 () | 23761..23982 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| CNQ51_RS25325 () | 23996..24430 | + | 435 | WP_040072108.1 | DUF1380 family protein | - |
| CNQ51_RS26255 () | 24476..25252 | + | 777 | WP_001005023.1 | hypothetical protein | - |
| CNQ51_RS25340 () | 25787..26089 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| CNQ51_RS25345 () | 26136..26558 | + | 423 | WP_000271744.1 | DUF1380 family protein | - |
| CNQ51_RS25350 () | 26555..26746 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| CNQ51_RS26130 () | 26817..27131 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| CNQ51_RS25365 () | 27515..28042 | + | 528 | WP_001276107.1 | single-stranded DNA-binding protein | - |
| CNQ51_RS25370 () | 28100..28333 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| CNQ51_RS25375 () | 28392..30350 | + | 1959 | WP_040072102.1 | ParB/RepB/Spo0J family partition protein | - |
| CNQ51_RS25380 () | 30405..30839 | + | 435 | WP_000845904.1 | conjugation system SOS inhibitor PsiB | - |
| CNQ51_RS25385 () | 30836..31555 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| CNQ51_RS25390 () | 31552..32148 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| CNQ51_RS25400 () | 32611..33111 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| CNQ51_RS25415 () | 33840..34274 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| CNQ51_RS25420 () | 34368..34634 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| CNQ51_RS25425 () | 34699..35589 | + | 891 | WP_000038332.1 | Recombination-promoting nuclease RpnA | VF |
| CNQ51_RS25430 () | 35589..35834 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| CNQ51_RS25435 () | 35865..36116 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| CNQ51_RS26260 () | 36150..36347 | - | 198 | WP_001161115.1 | hypothetical protein | - |
| CNQ51_RS25450 () | 36696..37544 | + | 849 | WP_001077019.1 | DUF4942 domain-containing protein | - |
| CNQ51_RS25455 () | 37630..37965 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| CNQ51_RS25460 () | 38199..38531 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| CNQ51_RS25465 () | 38542..41241 | + | 2700 | WP_010891268.1 | Protein TraI | Relaxase |
| CNQ51_RS25470 () | 41278..43569 | - | 2292 | WP_001289276.1 | hypothetical protein | - |
| CNQ51_RS25475 () | 43562..44632 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| CNQ51_RS25480 () | 44651..45859 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 46039..46101 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 46039..46101 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 46039..46101 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 46039..46101 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| CNQ51_RS25485 () | 46151..46303 | + | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| CNQ51_RS25490 () | 46375..46626 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| CNQ51_RS25495 () | 46926..47222 | + | 297 | WP_001275298.1 | hypothetical protein | - |
| CNQ51_RS26265 () | 47287..47463 | - | 177 | WP_001054904.1 | hypothetical protein | - |
| CNQ51_RS25500 () | 47855..48064 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| CNQ51_RS25505 () | 48136..48798 | - | 663 | WP_000653334.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| CNQ51_RS25510 () | 48863..51025 | - | 2163 | WP_000698351.1 | DotA/TraY family protein | - |
| CNQ51_RS25515 () | 51122..51706 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| CNQ51_RS25520 () | 51735..52937 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| CNQ51_RS25525 () | 52904..53518 | - | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| CNQ51_RS25530 () | 53518..56562 | - | 3045 | WP_001024780.1 | IncI1-type conjugal transfer protein TraU | - |
| CNQ51_RS25535 () | 56652..57452 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| CNQ51_RS25540 () | 57436..57624 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| CNQ51_RS25545 () | 57688..58092 | - | 405 | WP_000086957.1 | IncI1-type conjugal transfer protein TraR | - |
| CNQ51_RS25550 () | 58143..58670 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| CNQ51_RS25555 () | 58670..59374 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| CNQ51_RS25560 () | 59374..60663 | - | 1290 | WP_001272005.1 | conjugal transfer protein TraO | - |
| CNQ51_RS25565 () | 60666..61649 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| CNQ51_RS25570 () | 61660..62352 | - | 693 | WP_000138548.1 | DotI/IcmL family type IV secretion protein | - |
| CNQ51_RS25575 () | 62349..62696 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| CNQ51_RS25580 () | 62714..66481 | - | 3768 | WP_001141529.1 | DNA primase | - |
| CNQ51_RS25585 () | 66571..67122 | - | 552 | WP_000014583.1 | Phospholipase D | VF |
| CNQ51_RS25590 () | 67137..67427 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| CNQ51_RS25595 () | 67424..68572 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| CNQ51_RS25600 () | 68569..69387 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| CNQ51_RS25605 () | 69384..69842 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| CNQ51_RS25610 () | 70237..70821 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| CNQ51_RS25615 () | 70881..72083 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| CNQ51_RS25620 () | 72168..72992 | - | 825 | WP_001238939.1 | hypothetical protein | - |
| CNQ51_RS25625 () | 73143..74297 | - | 1155 | WP_001139957.1 | integrase | - |
| CNQ51_RS25630 () | 74425..74580 | + | 156 | WP_001302705.1 | hypothetical protein | - |
| CNQ51_RS26270 () | 75674..75933 | + | 260 | Protein_85 | prepilin | - |
| CNQ51_RS25660 () | 75930..77353 | - | 1424 | Protein_86 | hypothetical protein | VF |
| CNQ51_RS25665 () | 77353..78009 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| CNQ51_RS25670 () | 77994..78554 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| CNQ51_RS25675 () | 78564..79178 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| CNQ51_RS25680 () | 79196..80293 | - | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| CNQ51_RS25685 () | 80306..81859 | - | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| CNQ51_RS25690 () | 81870..82322 | - | 453 | WP_001247336.1 | hypothetical protein | VF |
| CNQ51_RS25695 () | 82309..83604 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| CNQ51_RS25700 () | 83597..85279 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| CNQ51_RS25705 () | 85293..85730 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| CNQ51_RS25710 () | 85730..86797 | - | 1068 | WP_000742600.1 | hypothetical protein | VF |
| CNQ51_RS25720 () | 87471..87923 | - | 453 | WP_000008893.1 | hypothetical protein | - |
| CNQ51_RS25725 () | 87966..88220 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| CNQ51_RS25730 () | 88488..89054 | - | 567 | WP_000776428.1 | hypothetical protein | - |
| CNQ51_RS25735 () | 89068..89751 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| CNQ51_RS25745 () | 90005..90538 | - | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| CNQ51_RS25755 () | 90980..91267 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| CNQ51_RS25760 () | 91185..91448 | - | 264 | WP_001324596.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli | Conjugative plasmid | TA10119, TA30466 | NC_025198 | 1..92339 | 0.008 |