MGE detailed information
MGE type: Conjugative plasmid MGE length: 111523 bp
Accession: NZ_CP023367 Location: 1..111523 Organism: Escherichia coli strain 1428 Replicon: plasmid p111
Accession: NZ_CP023367 Location: 1..111523 Organism: Escherichia coli strain 1428 Replicon: plasmid p111
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CNQ52_RS25350 () | 13..546 | + | 534 | WP_001505108.1 | incFII RepA family protein | - |
| CNQ52_RS25355 () | 536..1558 | + | 1023 | WP_000234918.1 | replication initiation protein | - |
| CNQ52_RS25370 () | 2477..2746 | + | 270 | WP_000079928.1 | hypothetical protein | Antitoxin Detail |
| CNQ52_RS25375 () | 2743..3024 | + | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CNQ52_RS25380 () | 3070..3918 | + | 849 | WP_001595246.1 | 3'-5' exonuclease | - |
| CNQ52_RS25385 () | 4035..4517 | + | 483 | WP_001311056.1 | hypothetical protein | - |
| CNQ52_RS25390 () | 4677..5699 | + | 1023 | WP_001595244.1 | IS110 family transposase ISSm1 | Transposase |
| CNQ52_RS25395 () | 6291..6575 | + | 285 | WP_001352814.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| CNQ52_RS25400 () | 6563..7048 | + | 486 | WP_001595243.1 | GNAT family N-acetyltransferase | Toxin Detail |
| CNQ52_RS25410 () | 7369..7641 | + | 273 | Protein_10 | transposase family protein | - |
| CNQ52_RS25415 () | 7728..8303 | + | 576 | WP_001595242.1 | Tyrosine recombinase XerD | VF |
| CNQ52_RS25420 () | 8763..9356 | + | 594 | WP_001595241.1 | Type-1 fimbrial protein, A chain | VF |
| CNQ52_RS25425 () | 9430..10134 | + | 705 | WP_001595240.1 | molecular chaperone | - |
| CNQ52_RS25430 () | 10220..10552 | + | 333 | WP_001595237.1 | fimbria/pilus periplasmic chaperone | - |
| CNQ52_RS25435 () | 10581..13088 | + | 2508 | WP_001595236.1 | Outer membrane usher protein SfmD | VF |
| CNQ52_RS25440 () | 13279..13680 | + | 402 | WP_024192260.1 | fimbria/pilus periplasmic chaperone | - |
| CNQ52_RS25445 () | 13741..14259 | + | 519 | WP_001595235.1 | type 1 fimbrial protein | - |
| CNQ52_RS25450 () | 14324..15499 | + | 1176 | WP_001595234.1 | hypothetical protein | - |
| CNQ52_RS25455 () | 16193..16798 | - | 606 | WP_001595233.1 | hypothetical protein | - |
| CNQ52_RS25465 () | 17152..18489 | + | 1338 | WP_096040774.1 | hypothetical protein | - |
| CNQ52_RS25470 () | 18771..20651 | + | 1881 | WP_001595229.1 | colicin 1B | - |
| CNQ52_RS25475 () | 20669..21016 | - | 348 | WP_001595228.1 | hypothetical protein | - |
| CNQ52_RS25480 () | 21135..21482 | + | 348 | WP_001595227.1 | hypothetical protein | - |
| CNQ52_RS25485 () | 21604..22390 | + | 787 | Protein_24 | IS21 family transposase IS640 | Transposase |
| CNQ52_RS25490 () | 22477..22755 | + | 279 | WP_001595223.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| CNQ52_RS25495 () | 22755..23030 | + | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CNQ52_RS25500 () | 23136..23417 | + | 282 | WP_001595222.1 | hypothetical protein | - |
| CNQ52_RS27915 () | 23855..24091 | + | 237 | WP_137498364.1 | colicin V immunity protein | - |
| CNQ52_RS25515 () | 24544..25494 | + | 951 | WP_001595221.1 | Protease 7 | VF |
| CNQ52_RS25520 () | 25679..27163 | + | 1485 | WP_096040775.1 | alpha/beta hydrolase | - |
| CNQ52_RS25525 () | 27495..28646 | + | 1152 | Protein_31 | IS3 family transposase | - |
| CNQ52_RS25530 () | 28684..28901 | - | 218 | Protein_32 | hypothetical protein | - |
| CNQ52_RS25535 () | 29324..29584 | + | 261 | WP_019842660.1 | hypothetical protein | - |
| CNQ52_RS25540 () | 29888..32065 | + | 2178 | WP_001595327.1 | Ferric enterobactin receptor | VF |
| CNQ52_RS25545 () | 32110..33066 | - | 957 | WP_001595326.1 | Ferri-bacillibactin esterase BesA | VF |
| CNQ52_RS25550 () | 33151..34380 | - | 1230 | WP_000933675.1 | Enterochelin esterase | VF |
| CNQ52_RS25555 () | 34484..38143 | - | 3660 | WP_001595325.1 | Multidrug efflux ATP-binding/permease protein | VF |
| CNQ52_RS25560 () | 38283..39398 | - | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| CNQ52_RS25570 () | 40708..41727 | - | 1020 | Protein_39 | transposase | - |
| CNQ52_RS25580 () | 42259..42448 | + | 190 | Protein_40 | lysis protein | - |
| CNQ52_RS25585 () | 42506..42790 | - | 285 | WP_001595320.1 | increased serum survival lipoprotein Iss | - |
| CNQ52_RS25600 () | 44558..45160 | + | 603 | Protein_42 | cobalamin biosynthesis protein CobW | - |
| CNQ52_RS25605 () | 45234..46402 | + | 1169 | WP_096040776.1 | IS3 family transposase ISLad1 | Transposase |
| CNQ52_RS25610 () | 46793..47209 | + | 417 | WP_001595315.1 | IS3 family transposase IS1351 | Transposase |
| CNQ52_RS25625 () | 48482..49435 | + | 954 | WP_000280980.1 | Protease 7 | VF |
| CNQ52_RS25635 () | 49868..50977 | + | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| CNQ52_RS25640 () | 51046..51948 | + | 903 | WP_001312822.1 | hypothetical protein | VF |
| CNQ52_RS25645 () | 52322..52510 | + | 189 | WP_032160254.1 | hypothetical protein | - |
| CNQ52_RS25650 () | 52631..53371 | + | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| CNQ52_RS25655 () | 53656..54633 | - | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| CNQ52_RS25665 () | 55415..56005 | - | 591 | WP_001595311.1 | hypothetical protein | - |
| CNQ52_RS25670 () | 56005..56262 | - | 258 | WP_000343099.1 | hypothetical protein | - |
| CNQ52_RS25675 () | 56582..57514 | - | 933 | WP_001595310.1 | hypothetical protein | - |
| CNQ52_RS25680 () | 57518..58513 | - | 996 | WP_001595309.1 | hypothetical protein | - |
| CNQ52_RS25685 () | 59220..59438 | + | 219 | WP_000813639.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| CNQ52_RS25690 () | 59440..59745 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| CNQ52_RS25695 () | 59746..60555 | + | 810 | WP_001595307.1 | site-specific integrase | - |
| CNQ52_RS25700 () | 60693..60968 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| CNQ52_RS25705 () | 60962..61606 | - | 645 | WP_000633911.1 | AAA family ATPase | - |
| CNQ52_RS25710 () | 61835..62806 | + | 972 | WP_001103690.1 | hypothetical protein | - |
| CNQ52_RS25715 () | 62811..63203 | + | 393 | WP_001595306.1 | plasmid partitioning/stability family protein | - |
| CNQ52_RS25720 () | 63208..64480 | - | 1273 | Protein_62 | translesion error-prone DNA polymerase V subunit UmuC | - |
| CNQ52_RS25730 () | 64480..64916 | - | 437 | Protein_63 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CNQ52_RS25735 () | 64913..65161 | - | 249 | Protein_64 | DinI-like family protein | - |
| CNQ52_RS27920 () | 65555..65713 | + | 159 | WP_001595302.1 | DUF1281 domain-containing protein | - |
| CNQ52_RS25745 () | 65775..66536 | - | 762 | Protein_66 | IS21 family transposase IS100kyp | Transposase |
| CNQ52_RS25750 () | 66533..67555 | - | 1023 | Protein_67 | IS21 family transposase IS100kyp | Transposase |
| CNQ52_RS25765 () | 68992..69963 | - | 972 | WP_001595295.1 | IS110 family transposase ISOt5 | Transposase |
| CNQ52_RS25775 () | 70584..70886 | + | 303 | WP_072169484.1 | antirestriction protein | - |
| CNQ52_RS25780 () | 70933..71355 | + | 423 | WP_001595292.1 | DUF1380 family protein | - |
| CNQ52_RS25785 () | 71352..71543 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| CNQ52_RS25795 () | 71979..72950 | - | 972 | WP_000082158.1 | IS110 family transposase ISSm3 | Transposase |
| CNQ52_RS25805 () | 73501..73788 | + | 288 | WP_001595289.1 | hypothetical protein | - |
| CNQ52_RS25810 () | 73907..74728 | + | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| CNQ52_RS25815 () | 75025..75672 | - | 648 | WP_143209719.1 | hypothetical protein | VF |
| CNQ52_RS25820 () | 75948..76331 | + | 384 | WP_001151530.1 | relaxosome protein TraM | - |
| CNQ52_RS25825 () | 76523..77170 | + | 648 | WP_096040777.1 | transcriptional regulator TraJ family protein | - |
| CNQ52_RS25830 () | 77278..77517 | + | 240 | WP_042357785.1 | conjugal transfer relaxosome protein TraY | - |
| CNQ52_RS25835 () | 77551..77943 | + | 393 | WP_024127870.1 | type IV conjugative transfer system pilin TraA | - |
| CNQ52_RS25840 () | 77958..78269 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| CNQ52_RS25845 () | 78291..78857 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| CNQ52_RS25850 () | 78868..79572 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| CNQ52_RS25855 () | 79572..80999 | + | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| CNQ52_RS25860 () | 80989..81579 | + | 591 | WP_000002787.1 | conjugal transfer protein TraP | - |
| CNQ52_RS25865 () | 81533..81886 | + | 354 | WP_096040778.1 | conjugal transfer protein TrbD | - |
| CNQ52_RS25870 () | 81879..82130 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| CNQ52_RS25875 () | 82127..82642 | + | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| CNQ52_RS25880 () | 82777..82998 | + | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| CNQ52_RS25885 () | 83158..85785 | + | 2628 | WP_096040779.1 | type IV secretion system protein TraC | - |
| CNQ52_RS25890 () | 85782..86168 | + | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| CNQ52_RS25895 () | 86165..86797 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| CNQ52_RS25900 () | 86794..87786 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| CNQ52_RS25905 () | 87812..88273 | + | 462 | WP_052933887.1 | hypothetical protein | - |
| CNQ52_RS25910 () | 88303..88755 | + | 453 | WP_096040780.1 | hypothetical protein | - |
| CNQ52_RS25915 () | 88783..89421 | + | 639 | WP_071686309.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| CNQ52_RS25920 () | 89418..91226 | + | 1809 | WP_096040782.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| CNQ52_RS25925 () | 91253..91510 | + | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| CNQ52_RS25930 () | 91503..92246 | + | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| CNQ52_RS25935 () | 92262..92609 | + | 348 | WP_001287893.1 | conjugal transfer protein TrbA | - |
| CNQ52_RS25940 () | 92728..93012 | + | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CNQ52_RS25945 () | 92999..93543 | + | 545 | Protein_101 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| CNQ52_RS25950 () | 93473..93813 | + | 341 | Protein_102 | P-type conjugative transfer protein TrbJ | - |
| CNQ52_RS25955 () | 93767..94180 | + | 414 | WP_071600849.1 | F-type conjugal transfer protein TrbF | - |
| CNQ52_RS25960 () | 94180..95553 | + | 1374 | WP_001595257.1 | conjugal transfer protein TraH | - |
| CNQ52_RS25965 () | 95550..98352 | + | 2803 | Protein_105 | conjugal transfer mating pair stabilization protein TraG | - |
| CNQ52_RS25970 () | 98498..98911 | + | 414 | Protein_106 | entry exclusion protein | - |
| CNQ52_RS25975 () | 98943..99674 | + | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| CNQ52_RS25980 () | 99927..102138 | + | 2212 | Protein_108 | type IV conjugative transfer system coupling protein TraD | - |
| CNQ52_RS28045 () | 102538..107416 | + | 4879 | Protein_109 | conjugative transfer relaxase/helicase TraI | - |
| CNQ52_RS25995 () | 107436..108182 | + | 747 | WP_001595252.1 | conjugal transfer pilus acetylase TraX | - |
| CNQ52_RS26000 () | 108237..108797 | + | 561 | WP_001595251.1 | fertility inhibition protein FinO | - |
| CNQ52_RS26005 () | 108934..109146 | + | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| CNQ52_RS26010 () | 109392..109853 | + | 462 | Protein_113 | thermonuclease family protein | - |
| CNQ52_RS26015 () | 109899..110108 | + | 210 | WP_001333231.1 | hemolysin expression modulator Hha | - |
| CNQ52_RS26020 () | 110146..110736 | + | 591 | WP_001595249.1 | DUF2726 domain-containing protein | - |
| CNQ52_RS26025 () | 110976..111236 | + | 261 | WP_001595248.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|