MGE detailed information
MGE type: Conjugative plasmid MGE length: 92421 bp
Accession: NZ_CP023365 Location: 1..92421 Organism: Escherichia coli strain 144 Replicon: plasmid p92
Accession: NZ_CP023365 Location: 1..92421 Organism: Escherichia coli strain 144 Replicon: plasmid p92
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CNQ53_RS26770 () | 1084..1668 | + | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| CNQ53_RS26775 () | 1765..3927 | + | 2163 | WP_000698351.1 | DotA/TraY family protein | - |
| CNQ53_RS26780 () | 3992..4654 | + | 663 | WP_000653334.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| CNQ53_RS26785 () | 4726..4935 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| CNQ53_RS27875 () | 5327..5503 | + | 177 | WP_001054904.1 | hypothetical protein | - |
| CNQ53_RS26790 () | 5568..5864 | - | 297 | WP_001275298.1 | hypothetical protein | - |
| CNQ53_RS26795 () | 6164..6415 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| CNQ53_RS26800 () | 6487..6639 | - | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| - () | 6689..6751 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 6689..6751 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 6689..6751 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 6689..6751 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| CNQ53_RS26805 () | 6931..8139 | + | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| CNQ53_RS26810 () | 8158..9228 | + | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| CNQ53_RS26815 () | 9221..11512 | + | 2292 | WP_001289276.1 | hypothetical protein | - |
| CNQ53_RS26820 () | 11549..14248 | - | 2700 | WP_010891268.1 | Protein TraI | Relaxase |
| CNQ53_RS26825 () | 14259..14591 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| CNQ53_RS26830 () | 14825..15160 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| CNQ53_RS26835 () | 15246..16094 | - | 849 | WP_001077019.1 | DUF4942 domain-containing protein | - |
| CNQ53_RS27880 () | 16443..16640 | + | 198 | WP_001161115.1 | hypothetical protein | - |
| CNQ53_RS26850 () | 16674..16925 | + | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| CNQ53_RS26855 () | 16956..17201 | - | 246 | WP_001260884.1 | hypothetical protein | - |
| CNQ53_RS26860 () | 17201..18091 | - | 891 | WP_000038332.1 | Recombination-promoting nuclease RpnA | VF |
| CNQ53_RS26865 () | 18156..18422 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| CNQ53_RS26870 () | 18516..18950 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| CNQ53_RS26885 () | 19679..20179 | - | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| CNQ53_RS26895 () | 20642..21238 | - | 597 | WP_000978012.1 | hypothetical protein | - |
| CNQ53_RS26900 () | 21235..21954 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| CNQ53_RS26905 () | 21951..22385 | - | 435 | WP_000845904.1 | conjugation system SOS inhibitor PsiB | - |
| CNQ53_RS26910 () | 22440..24398 | - | 1959 | WP_040072102.1 | ParB/RepB/Spo0J family partition protein | - |
| CNQ53_RS26915 () | 24456..24689 | - | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| CNQ53_RS26920 () | 24747..25274 | - | 528 | Protein_28 | single-stranded DNA-binding protein | - |
| CNQ53_RS27735 () | 25658..25972 | - | 315 | WP_001434357.1 | hypothetical protein | - |
| CNQ53_RS26935 () | 26043..26234 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| CNQ53_RS26940 () | 26231..26653 | - | 423 | WP_000271744.1 | DUF1380 family protein | - |
| CNQ53_RS26945 () | 26700..27002 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| CNQ53_RS27885 () | 27537..28313 | - | 777 | WP_001005023.1 | hypothetical protein | - |
| CNQ53_RS26960 () | 28359..28793 | - | 435 | WP_040072108.1 | DUF1380 family protein | - |
| CNQ53_RS26965 () | 28807..29028 | - | 222 | WP_001104881.1 | hypothetical protein | - |
| CNQ53_RS26970 () | 29029..29712 | - | 684 | WP_000086147.1 | DNA methylase | - |
| CNQ53_RS26975 () | 29788..30099 | - | 312 | WP_031942433.1 | hypothetical protein | - |
| CNQ53_RS26980 () | 30096..30998 | - | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| CNQ53_RS26990 () | 31416..31664 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| CNQ53_RS26995 () | 31661..32098 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CNQ53_RS27000 () | 32098..33372 | + | 1275 | WP_000457524.1 | Y-family DNA polymerase | - |
| CNQ53_RS27005 () | 33374..33790 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| CNQ53_RS27010 () | 33783..34763 | - | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| CNQ53_RS27015 () | 35177..35485 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| CNQ53_RS27020 () | 35572..36216 | - | 645 | WP_001144036.1 | ParA family protein | - |
| CNQ53_RS27025 () | 36396..37175 | - | 780 | WP_001164201.1 | site-specific integrase | - |
| CNQ53_RS27030 () | 37177..37590 | - | 414 | WP_000465043.1 | hypothetical protein | - |
| CNQ53_RS27040 () | 38158..38415 | + | 258 | WP_000343085.1 | hypothetical protein | - |
| CNQ53_RS27045 () | 38415..39005 | + | 591 | WP_000194576.1 | hypothetical protein | - |
| CNQ53_RS27050 () | 39025..39372 | - | 348 | WP_000142451.1 | hypothetical protein | - |
| CNQ53_RS27060 () | 39501..39836 | + | 336 | WP_001080735.1 | hypothetical protein | - |
| CNQ53_RS27065 () | 39858..41738 | - | 1881 | WP_001283344.1 | colicin 1A | - |
| CNQ53_RS27075 () | 42017..43363 | - | 1347 | WP_001132033.1 | hypothetical protein | - |
| CNQ53_RS27085 () | 43717..44319 | + | 603 | WP_000517692.1 | hypothetical protein | - |
| CNQ53_RS27090 () | 44466..45752 | - | 1287 | Protein_55 | DUF4165 domain-containing protein | - |
| CNQ53_RS27100 () | 46480..46797 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| CNQ53_RS27105 () | 46794..47327 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| CNQ53_RS27110 () | 47421..48566 | - | 1146 | WP_000976514.1 | Beta-lactamase | ARG |
| CNQ53_RS27115 () | 48890..49057 | - | 168 | Protein_59 | transposase | - |
| CNQ53_RS27120 () | 49135..49407 | + | 273 | WP_000019163.1 | hypothetical protein | - |
| CNQ53_RS27125 () | 49388..50596 | + | 1209 | WP_000198533.1 | IS91 family transposase ISSbo1 | Transposase |
| CNQ53_RS27145 () | 51757..52788 | - | 1032 | WP_000907875.1 | replication initiation protein | - |
| CNQ53_RS27160 () | 53761..54024 | + | 264 | WP_001324596.1 | ash family protein | - |
| CNQ53_RS27165 () | 53942..54229 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| CNQ53_RS27175 () | 54671..55204 | + | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| CNQ53_RS27185 () | 55458..56141 | + | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| CNQ53_RS27190 () | 56155..56721 | + | 567 | WP_000776428.1 | hypothetical protein | - |
| CNQ53_RS27195 () | 56989..57243 | + | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| CNQ53_RS27200 () | 57286..57738 | + | 453 | WP_000008893.1 | hypothetical protein | - |
| CNQ53_RS27210 () | 58412..59479 | + | 1068 | WP_000742600.1 | hypothetical protein | VF |
| CNQ53_RS27215 () | 59479..59916 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
| CNQ53_RS27220 () | 59930..61612 | + | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| CNQ53_RS27225 () | 61605..62900 | + | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| CNQ53_RS27230 () | 62887..63339 | + | 453 | WP_001247336.1 | hypothetical protein | VF |
| CNQ53_RS27235 () | 63350..64903 | + | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| CNQ53_RS27240 () | 64916..66013 | + | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| CNQ53_RS27245 () | 66031..66645 | + | 615 | WP_000959785.1 | hypothetical protein | VF |
| CNQ53_RS27250 () | 66655..67215 | + | 561 | WP_000014116.1 | hypothetical protein | VF |
| CNQ53_RS27255 () | 67200..67856 | + | 657 | WP_001193553.1 | hypothetical protein | VF |
| CNQ53_RS27260 () | 67856..69226 | + | 1371 | WP_001393542.1 | hypothetical protein | VF |
| CNQ53_RS27890 () | 70200..70511 | + | 312 | WP_052994010.1 | hypothetical protein | - |
| CNQ53_RS27285 () | 70508..70756 | - | 249 | WP_001349157.1 | hypothetical protein | - |
| CNQ53_RS27895 () | 70805..70930 | - | 126 | Protein_83 | prepilin, shufflon protein A | - |
| CNQ53_RS27295 () | 70914..72068 | + | 1155 | WP_001139957.1 | integrase | - |
| CNQ53_RS27300 () | 72219..73043 | + | 825 | WP_001238939.1 | hypothetical protein | - |
| CNQ53_RS27305 () | 73128..74330 | + | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| CNQ53_RS27310 () | 74390..74974 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| CNQ53_RS27315 () | 75369..75827 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| CNQ53_RS27320 () | 75824..76642 | + | 819 | WP_000646098.1 | hypothetical protein | VF |
| CNQ53_RS27325 () | 76639..77787 | + | 1149 | WP_001024972.1 | putative protein YggR | VF |
| CNQ53_RS27330 () | 77784..78074 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| CNQ53_RS27335 () | 78089..78640 | + | 552 | WP_000014583.1 | Phospholipase D | VF |
| CNQ53_RS27340 () | 78730..82497 | + | 3768 | WP_001141529.1 | DNA primase | - |
| CNQ53_RS27345 () | 82515..82862 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| CNQ53_RS27350 () | 82859..83551 | + | 693 | WP_000138548.1 | DotI/IcmL family type IV secretion protein | - |
| CNQ53_RS27355 () | 83562..84545 | + | 984 | WP_001191877.1 | hypothetical protein | VF |
| CNQ53_RS27360 () | 84548..85837 | + | 1290 | WP_001272005.1 | conjugal transfer protein TraO | - |
| CNQ53_RS27365 () | 85837..86541 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| CNQ53_RS27370 () | 86541..87068 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| CNQ53_RS27375 () | 87119..87523 | + | 405 | WP_000086957.1 | IncI1-type conjugal transfer protein TraR | - |
| CNQ53_RS27380 () | 87587..87775 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| CNQ53_RS27385 () | 87759..88559 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| CNQ53_RS27390 () | 88649..91693 | + | 3045 | WP_001024780.1 | IncI1-type conjugal transfer protein TraU | - |
| CNQ53_RS27395 () | 91693..92307 | + | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli | Conjugative plasmid | TA10119, TA30466 | NC_025198 | 1..92339 | 0.008 |