MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 92538 bp
Accession: NZ_CP022228 Location: 1..92538 Organism: Escherichia coli strain WCHEC96200 Replicon: plasmid p1_000200
Accession: NZ_CP022228 Location: 1..92538 Organism: Escherichia coli strain WCHEC96200 Replicon: plasmid p1_000200
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DBR04_RS01275 () | 963..1214 | + | 252 | WP_032153798.1 | DNA polymerase III subunit theta | - |
| DBR04_RS01280 () | 1338..1727 | + | 390 | WP_032153799.1 | DNA repair protein | - |
| DBR04_RS01285 () | 1800..2021 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| DBR04_RS01290 () | 2021..2401 | + | 381 | WP_001216041.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| DBR04_RS01295 () | 2437..3531 | - | 1095 | WP_087503526.1 | hypothetical protein | - |
| DBR04_RS01300 () | 3521..4288 | - | 768 | WP_087503525.1 | hypothetical protein | - |
| DBR04_RS01305 () | 4295..4957 | - | 663 | WP_060877112.1 | DUF2829 domain-containing protein | - |
| DBR04_RS01310 () | 4972..5466 | - | 495 | WP_000640903.1 | dUTP diphosphatase | - |
| DBR04_RS01315 () | 5463..5939 | - | 477 | WP_087503524.1 | hypothetical protein | - |
| DBR04_RS01320 () | 5936..6280 | - | 345 | WP_087503523.1 | hypothetical protein | - |
| DBR04_RS01325 () | 6355..7383 | - | 1029 | WP_087503522.1 | tyrosine-type recombinase/integrase | - |
| DBR04_RS26730 () | 7778..8815 | + | 1038 | WP_023908617.1 | hypothetical protein | - |
| DBR04_RS01335 () | 8843..10351 | - | 1509 | WP_000897063.1 | hypothetical protein | - |
| DBR04_RS01340 () | 10351..11331 | - | 981 | WP_031325887.1 | hypothetical protein | - |
| DBR04_RS01345 () | 11712..12104 | - | 393 | WP_000435256.1 | hypothetical protein | - |
| DBR04_RS26735 () | 12213..12605 | - | 393 | WP_023908618.1 | hypothetical protein | - |
| DBR04_RS26740 () | 12605..13180 | - | 576 | WP_000928280.1 | hypothetical protein | - |
| DBR04_RS01365 () | 13830..13994 | - | 165 | WP_000579539.1 | DUF3927 family protein | - |
| DBR04_RS01370 () | 13994..14428 | - | 435 | WP_000467090.1 | tellurite resistance TerB family protein | - |
| DBR04_RS01405 () | 16788..17996 | - | 1209 | WP_000077919.1 | hypothetical protein | - |
| DBR04_RS01415 () | 18406..18606 | - | 201 | WP_001238268.1 | hypothetical protein | - |
| DBR04_RS01420 () | 18621..18917 | - | 297 | WP_086252943.1 | VRR-NUC domain-containing protein | - |
| DBR04_RS01425 () | 19252..19512 | - | 261 | WP_074470335.1 | hypothetical protein | - |
| DBR04_RS01430 () | 19515..19949 | - | 435 | WP_074470334.1 | olxA | - |
| DBR04_RS01435 () | 19986..26822 | - | 6837 | WP_087503521.1 | DEAD/DEAH box helicase family protein | - |
| DBR04_RS01440 () | 26974..27459 | + | 486 | WP_001273800.1 | TIGR02594 family protein | - |
| DBR04_RS01445 () | 27492..27689 | - | 198 | WP_001344836.1 | hypothetical protein | - |
| DBR04_RS01450 () | 27689..28396 | - | 708 | WP_052936018.1 | Rha family transcriptional regulator | - |
| DBR04_RS01455 () | 28396..28620 | - | 225 | WP_000245715.1 | host cell division inhibitor Icd-like protein | - |
| DBR04_RS01460 () | 29035..29997 | - | 963 | WP_087503520.1 | lytic replication protein | - |
| DBR04_RS01465 () | 30198..31196 | - | 999 | WP_001191134.1 | hypothetical protein | - |
| DBR04_RS01470 () | 31210..32892 | - | 1683 | WP_087503519.1 | phage portal protein | - |
| DBR04_RS01480 () | 32957..34342 | - | 1386 | WP_060877101.1 | hypothetical protein | - |
| DBR04_RS01485 () | 34449..35657 | - | 1209 | WP_080028495.1 | IS200-IS605 family transposase IS609 | Transposase |
| DBR04_RS01490 () | 35774..36148 | - | 375 | WP_060877123.1 | hypothetical protein | - |
| DBR04_RS01495 () | 36148..38085 | - | 1938 | WP_087503513.1 | head protein | - |
| DBR04_RS01500 () | 38078..38698 | - | 621 | WP_073714457.1 | hypothetical protein | - |
| DBR04_RS01505 () | 38688..39134 | - | 447 | WP_000526264.1 | hypothetical protein | - |
| DBR04_RS01510 () | 39134..39460 | - | 327 | WP_053919841.1 | holin | - |
| DBR04_RS01515 () | 39677..40249 | - | 573 | WP_000904922.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| DBR04_RS01520 () | 40321..40749 | + | 429 | WP_072172283.1 | phage tail protein | - |
| DBR04_RS01525 () | 40778..41233 | + | 456 | WP_001573915.1 | phage tail protein | - |
| DBR04_RS01530 () | 41240..41854 | - | 615 | WP_000072166.1 | tail fiber assembly protein | - |
| DBR04_RS01535 () | 41854..43740 | - | 1887 | WP_108161039.1 | tail fiber protein | - |
| DBR04_RS26745 () | 43743..44189 | - | 447 | WP_064761104.1 | hypothetical protein | - |
| DBR04_RS01545 () | 44284..45129 | - | 846 | WP_023908647.1 | hypothetical protein | - |
| DBR04_RS01550 () | 45140..46570 | - | 1431 | WP_023908648.1 | bleomycin hydrolase | - |
| DBR04_RS01555 () | 46567..46941 | - | 375 | WP_087503511.1 | hypothetical protein | - |
| DBR04_RS01560 () | 46947..47576 | - | 630 | Protein_49 | transglycosylase | - |
| DBR04_RS01565 () | 48273..51383 | - | 3111 | Protein_50 | transglycosylase | - |
| DBR04_RS01570 () | 51398..52219 | - | 822 | WP_001025048.1 | hypothetical protein | - |
| DBR04_RS01575 () | 52608..53363 | + | 756 | WP_001077897.1 | RepB family plasmid replication initiator protein | - |
| DBR04_RS01580 () | 53745..54452 | - | 708 | WP_000021878.1 | hypothetical protein | - |
| DBR04_RS01585 () | 54468..55019 | - | 552 | WP_000187854.1 | hypothetical protein | - |
| DBR04_RS01590 () | 55074..55565 | - | 492 | WP_000012433.1 | hypothetical protein | - |
| DBR04_RS01595 () | 55574..56146 | - | 573 | WP_087503510.1 | hypothetical protein | - |
| DBR04_RS01600 () | 56214..56948 | - | 735 | WP_000801017.1 | hypothetical protein | - |
| DBR04_RS01605 () | 56992..58650 | - | 1659 | WP_087503509.1 | phage tail protein | - |
| DBR04_RS01610 () | 58718..58996 | - | 279 | WP_087503508.1 | Ig-like domain-containing protein | - |
| DBR04_RS01615 () | 59144..60841 | - | 1698 | WP_032342068.1 | hypothetical protein | - |
| DBR04_RS01620 () | 61000..61392 | + | 393 | WP_032342084.1 | hypothetical protein | - |
| DBR04_RS01625 () | 61411..61869 | + | 459 | WP_072650276.1 | hypothetical protein | - |
| DBR04_RS01630 () | 62023..62481 | - | 459 | WP_087503507.1 | hypothetical protein | - |
| DBR04_RS01635 () | 62552..63355 | - | 804 | WP_087503506.1 | hypothetical protein | - |
| DBR04_RS01640 () | 63355..63639 | - | 285 | WP_074417202.1 | alanine racemase | - |
| DBR04_RS01645 () | 63906..64862 | + | 957 | WP_001217888.1 | recombinase | - |
| DBR04_RS01650 () | 64875..65213 | + | 339 | WP_052930744.1 | plasmid stabilization protein | - |
| DBR04_RS01655 () | 65492..66133 | + | 642 | WP_087503505.1 | AAA family ATPase | - |
| DBR04_RS01660 () | 66126..66410 | + | 285 | WP_087503504.1 | hypothetical protein | - |
| DBR04_RS01665 () | 66555..67460 | - | 906 | WP_087503503.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| DBR04_RS01670 () | 67453..68133 | - | 681 | WP_000812238.1 | hypothetical protein | - |
| DBR04_RS01675 () | 68117..69022 | - | 906 | WP_087503502.1 | recombination-associated protein RdgC | - |
| DBR04_RS01680 () | 69082..69735 | - | 654 | WP_087503501.1 | baseplate protein | - |
| DBR04_RS01685 () | 69732..70712 | - | 981 | WP_069936439.1 | tail length tape measure protein | - |
| DBR04_RS01690 () | 70716..71483 | - | 768 | WP_000203293.1 | hypothetical protein | - |
| DBR04_RS01695 () | 71480..72271 | - | 792 | WP_063074813.1 | hypothetical protein | - |
| DBR04_RS01700 () | 72434..72736 | + | 303 | WP_000162415.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DBR04_RS01705 () | 72807..73145 | + | 339 | WP_000806445.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| DBR04_RS01710 () | 73202..73402 | + | 201 | WP_001022420.1 | hypothetical protein | - |
| DBR04_RS01715 () | 73424..74152 | + | 729 | WP_080077649.1 | hypothetical protein | - |
| DBR04_RS01720 () | 74186..75379 | - | 1194 | WP_063074560.1 | hypothetical protein | - |
| DBR04_RS01725 () | 75372..75701 | - | 330 | WP_000542383.1 | hypothetical protein | - |
| DBR04_RS01730 () | 75794..76075 | - | 282 | WP_032323276.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| DBR04_RS01735 () | 76084..76365 | - | 282 | WP_032323275.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DBR04_RS01740 () | 76702..77355 | - | 654 | WP_000410954.1 | hypothetical protein | - |
| DBR04_RS01745 () | 77639..78247 | + | 609 | WP_032323273.1 | hypothetical protein | - |
| DBR04_RS01750 () | 78433..78660 | + | 228 | WP_001396850.1 | hypothetical protein | - |
| DBR04_RS01755 () | 78657..78968 | - | 312 | WP_000717724.1 | hypothetical protein | - |
| DBR04_RS01760 () | 79028..79954 | - | 927 | WP_072275558.1 | Rha family transcriptional regulator | - |
| DBR04_RS01765 () | 79954..80169 | - | 216 | WP_022630900.1 | host cell division inhibitor Icd-like protein | - |
| DBR04_RS01770 () | 80188..80307 | - | 120 | WP_071526433.1 | ash family protein | - |
| DBR04_RS26750 () | 80481..80648 | - | 168 | WP_162983138.1 | hypothetical protein | - |
| DBR04_RS01775 () | 80980..81558 | - | 579 | WP_087503500.1 | recombinase | - |
| DBR04_RS01780 () | 81831..82454 | + | 624 | WP_000240859.1 | DUF4406 domain-containing protein | - |
| DBR04_RS01790 () | 82758..83267 | + | 510 | WP_087503499.1 | hypothetical protein | - |
| DBR04_RS01795 () | 83264..83905 | + | 642 | WP_087503498.1 | ead/Ea22-like family protein | - |
| DBR04_RS01800 () | 83902..84150 | + | 249 | WP_023908606.1 | hypothetical protein | - |
| DBR04_RS01805 () | 84147..84440 | + | 294 | WP_023908607.1 | DUF4752 family protein | - |
| DBR04_RS01810 () | 84418..84642 | + | 225 | WP_023908608.1 | hypothetical protein | - |
| DBR04_RS01815 () | 84639..84950 | + | 312 | WP_001092152.1 | hypothetical protein | - |
| DBR04_RS01820 () | 84972..85037 | - | 66 | Protein_101 | transposase | - |
| DBR04_RS01825 () | 85062..86270 | + | 1209 | WP_108161038.1 | IS200-IS605 family transposase IS609 | Transposase |
| DBR04_RS01830 () | 86307..86975 | + | 669 | WP_087503534.1 | metallophosphoesterase | - |
| DBR04_RS01835 () | 87072..88067 | + | 996 | WP_087503533.1 | DUF968 domain-containing protein | - |
| DBR04_RS01840 () | 88081..88167 | + | 87 | WP_108161037.1 | DUF4752 family protein | - |
| DBR04_RS01845 () | 88164..88355 | + | 192 | WP_060877081.1 | DUF1382 family protein | - |
| DBR04_RS01850 () | 88352..88972 | + | 621 | WP_087503532.1 | ead/Ea22-like family protein | - |
| DBR04_RS01855 () | 88969..89415 | + | 447 | WP_047647121.1 | ead/Ea22-like family protein | - |
| DBR04_RS26755 () | 89588..89764 | + | 177 | WP_000797289.1 | hypothetical protein | - |
| DBR04_RS01860 () | 89761..89949 | + | 189 | WP_000797279.1 | hypothetical protein | - |
| DBR04_RS01865 () | 89951..90160 | + | 210 | WP_000951710.1 | hypothetical protein | - |
| DBR04_RS01870 () | 90157..90846 | + | 690 | WP_087503531.1 | DUF551 domain-containing protein | - |
| DBR04_RS01875 () | 90843..91103 | + | 261 | WP_087503530.1 | eaa protein | - |
| DBR04_RS01880 () | 91389..91805 | + | 417 | WP_063074823.1 | hypothetical protein | - |
| DBR04_RS01885 () | 91818..92111 | + | 294 | WP_087503529.1 | hypothetical protein | - |
| DBR04_RS01890 () | 92111..92419 | + | 309 | WP_087503528.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|