MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 66457 bp
Accession: NZ_CP022137 Location: 1..66457 Organism: Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 Replicon: plasmid unnamed2
Accession: NZ_CP022137 Location: 1..66457 Organism: Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LFZ55_RS24620 () | 1..930 | + | 930 | WP_088734789.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| LFZ55_RS24625 () | 1081..1863 | - | 783 | WP_088734791.1 | site-specific integrase | - |
| LFZ55_RS24635 () | 2172..2477 | - | 306 | WP_001159874.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| LFZ55_RS24640 () | 2479..2697 | - | 219 | WP_000813642.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| LFZ55_RS24645 () | 3442..3672 | + | 231 | WP_088734793.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LFZ55_RS24650 () | 3669..4085 | + | 417 | WP_088734795.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LFZ55_RS24655 () | 4132..5055 | - | 924 | Protein_6 | pcar | - |
| LFZ55_RS24660 () | 5051..5379 | - | 329 | Protein_7 | Tn3 family transposase | - |
| LFZ55_RS24665 () | 5450..6283 | - | 834 | WP_080071163.1 | SdiA-regulated domain-containing protein | - |
| LFZ55_RS24670 () | 6444..7097 | - | 654 | WP_080071162.1 | DsbA family protein | - |
| LFZ55_RS24675 () | 7355..7693 | - | 339 | WP_080071161.1 | helix-turn-helix transcriptional regulator | - |
| LFZ55_RS24680 () | 7678..7890 | - | 213 | WP_080071160.1 | regulator | - |
| LFZ55_RS24685 () | 8042..8920 | - | 879 | WP_088734797.1 | hypothetical protein | - |
| LFZ55_RS24690 () | 8924..11353 | - | 2430 | WP_198387317.1 | fimbrial biogenesis outer membrane usher protein | - |
| LFZ55_RS24695 () | 11379..12092 | - | 714 | WP_080071157.1 | molecular chaperone | - |
| LFZ55_RS24700 () | 12181..12774 | - | 594 | WP_080071156.1 | type 1 fimbrial protein | - |
| LFZ55_RS24705 () | 12986..13285 | - | 300 | WP_080071236.1 | hypothetical protein | - |
| LFZ55_RS24710 () | 13312..13977 | - | 666 | WP_080071155.1 | hypothetical protein | - |
| LFZ55_RS24715 () | 14839..15282 | - | 444 | WP_088734801.1 | hypothetical protein | - |
| LFZ55_RS24720 () | 15381..16103 | - | 723 | WP_088734803.1 | transcriptional regulator | - |
| LFZ55_RS24725 () | 16453..16890 | - | 438 | WP_088734805.1 | IS200/IS605 family transposase | - |
| LFZ55_RS24730 () | 17082..18020 | - | 939 | WP_088734807.1 | hypothetical protein | - |
| LFZ55_RS24740 () | 18615..19346 | - | 732 | WP_088734811.1 | HNH endonuclease | - |
| LFZ55_RS24755 () | 20391..21272 | - | 882 | WP_088734817.1 | incFII family plasmid replication initiator RepA | - |
| LFZ55_RS24760 () | 21253..21330 | - | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| LFZ55_RS24770 () | 21578..21844 | - | 267 | WP_001576653.1 | replication regulatory protein RepA | - |
| LFZ55_RS24780 () | 22023..22464 | - | 442 | Protein_26 | phospholipase | - |
| LFZ55_RS25540 () | 22630..22848 | - | 219 | WP_024159358.1 | hypothetical protein | - |
| LFZ55_RS24790 () | 23192..23755 | - | 564 | WP_079841969.1 | fertility inhibition protein FinO | - |
| LFZ55_RS24795 () | 23810..24550 | - | 741 | WP_088734819.1 | conjugal transfer pilus acetylase TraX | - |
| LFZ55_RS24800 () | 24570..29828 | - | 5259 | WP_088734821.1 | conjugative transfer relaxase/helicase TraI | - |
| LFZ55_RS24805 () | 29910..30137 | + | 228 | WP_000450263.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| LFZ55_RS24810 () | 30137..30535 | + | 399 | WP_058215171.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| LFZ55_RS24815 () | 30544..32787 | - | 2244 | WP_088734824.1 | type IV conjugative transfer system coupling protein TraD | - |
| LFZ55_RS24820 () | 33164..33895 | - | 732 | WP_011282396.1 | complement resistance protein TraT | - |
| LFZ55_RS24825 () | 34141..34623 | - | 483 | WP_000787664.1 | hypothetical protein | - |
| LFZ55_RS24830 () | 34645..37467 | - | 2823 | WP_088734826.1 | conjugal transfer mating pair stabilization protein TraG | - |
| LFZ55_RS24835 () | 37464..38846 | - | 1383 | WP_088734828.1 | conjugal transfer protein TraH | - |
| LFZ55_RS24840 () | 38836..39384 | - | 549 | WP_000055842.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| LFZ55_RS24845 () | 39371..39664 | - | 294 | WP_001233882.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LFZ55_RS24850 () | 39878..40621 | - | 744 | WP_001227834.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| LFZ55_RS24855 () | 40634..40849 | - | 216 | WP_001220322.1 | conjugal transfer protein TrbE | - |
| LFZ55_RS24860 () | 40860..41336 | - | 477 | WP_001746543.1 | hypothetical protein | - |
| LFZ55_RS24865 () | 41347..43173 | - | 1827 | WP_088734830.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| LFZ55_RS24870 () | 43170..43551 | - | 382 | Protein_44 | HNH endonuclease | - |
| LFZ55_RS24875 () | 43588..44226 | - | 639 | WP_088734832.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| LFZ55_RS24880 () | 44211..44519 | - | 309 | WP_088734833.1 | hypothetical protein | - |
| LFZ55_RS24885 () | 44538..45524 | - | 987 | WP_058108413.1 | conjugal transfer pilus assembly protein TraU | - |
| LFZ55_RS24890 () | 45521..46153 | - | 633 | WP_088734835.1 | type-F conjugative transfer system protein TraW | - |
| LFZ55_RS24895 () | 46150..46536 | - | 387 | WP_000105164.1 | type-F conjugative transfer system protein TrbI | - |
| LFZ55_RS24900 () | 46511..49159 | - | 2649 | WP_088734837.1 | type IV secretion system protein TraC | - |
| LFZ55_RS24905 () | 49175..49558 | - | 384 | WP_042827805.1 | hypothetical protein | - |
| LFZ55_RS24910 () | 49555..50022 | - | 468 | WP_088734839.1 | hypothetical protein | - |
| LFZ55_RS24915 () | 50015..50236 | - | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| LFZ55_RS24920 () | 50371..50886 | - | 516 | WP_088734841.1 | type IV conjugative transfer system lipoprotein TraV | - |
| LFZ55_RS24925 () | 50883..51128 | - | 246 | WP_088734843.1 | DUF2689 domain-containing protein | - |
| LFZ55_RS24930 () | 51106..51642 | - | 537 | WP_088734859.1 | conjugal transfer protein TraP | - |
| LFZ55_RS24935 () | 51674..53053 | - | 1380 | WP_088734845.1 | conjugal transfer protein TraB | - |
| LFZ55_RS24940 () | 53053..53793 | - | 741 | WP_088734847.1 | type-F conjugative transfer system secretin TraK | - |
| LFZ55_RS24945 () | 53780..54346 | - | 567 | WP_021003395.1 | type IV conjugative transfer system protein TraE | - |
| LFZ55_RS24950 () | 54368..54679 | - | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| LFZ55_RS24955 () | 54694..55056 | - | 363 | WP_001274202.1 | type IV conjugative transfer system pilin TraA | - |
| LFZ55_RS24960 () | 55098..55493 | - | 396 | WP_001674566.1 | conjugal transfer relaxosome protein TraY | - |
| LFZ55_RS24965 () | 55592..56281 | - | 690 | WP_079841988.1 | conjugal transfer transcriptional regulator TraJ | - |
| LFZ55_RS24970 () | 56476..56856 | - | 381 | WP_001151568.1 | relaxosome protein TraM | - |
| LFZ55_RS24975 () | 57280..57750 | + | 471 | WP_088734861.1 | transglycosylase SLT domain-containing protein | - |
| LFZ55_RS24980 () | 58061..58869 | - | 809 | Protein_66 | DUF945 domain-containing protein | - |
| LFZ55_RS25545 () | 58973..59131 | - | 159 | WP_001704449.1 | hypothetical protein | - |
| LFZ55_RS24985 () | 59380..60117 | - | 738 | WP_088734849.1 | plasmid SOS inhibition protein A | - |
| LFZ55_RS24990 () | 60114..60503 | - | 390 | WP_088734851.1 | DUF1380 family protein | - |
| LFZ55_RS24995 () | 60544..61224 | - | 681 | WP_088734853.1 | DNA methylase | - |
| LFZ55_RS25000 () | 61774..62634 | - | 861 | WP_001077699.1 | RepB family plasmid replication initiator protein | - |
| LFZ55_RS25005 () | 63093..63515 | + | 423 | WP_088734855.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LFZ55_RS25010 () | 63493..64765 | + | 1273 | Protein_73 | Y-family DNA polymerase | - |
| LFZ55_RS25015 () | 64968..65594 | + | 627 | WP_015059765.1 | ParA family plasmid-partitioning AAA ATPase | - |
| LFZ55_RS25550 () | 65591..65881 | + | 291 | WP_015059764.1 | hypothetical protein | - |
| LFZ55_RS25025 () | 65962..66210 | + | 249 | WP_088734857.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|