MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 67447 bp
Accession: NZ_CP021662 Location: 1..67447 Organism: Candidatus Fukatsuia symbiotica strain 5D Replicon: plasmid p5D_Fsymbiotica-3
Accession: NZ_CP021662 Location: 1..67447 Organism: Candidatus Fukatsuia symbiotica strain 5D Replicon: plasmid p5D_Fsymbiotica-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCS41_RS15105 () | 596..1096 | - | 501 | WP_162860132.1 | hypothetical protein | - |
| CCS41_RS15110 () | 1333..1536 | - | 204 | WP_119797984.1 | TraY domain-containing protein | - |
| CCS41_RS15115 () | 1692..1985 | - | 294 | WP_119797985.1 | transcriptional regulator | - |
| CCS41_RS15120 () | 2057..2947 | - | 891 | WP_119797986.1 | hypothetical protein | - |
| CCS41_RS15835 () | 3313..3582 | - | 270 | WP_162860133.1 | hypothetical protein | - |
| CCS41_RS15125 () | 4299..5258 | + | 960 | WP_119797987.1 | plasmid stabilization protein | - |
| CCS41_RS15130 () | 5275..5658 | + | 384 | WP_119797988.1 | plasmid partitioning/stability family protein | - |
| CCS41_RS15135 () | 5769..6065 | - | 297 | WP_119797989.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| CCS41_RS15140 () | 6350..6658 | + | 309 | WP_119797990.1 | ribbon-helix-helix protein, CopG family | - |
| CCS41_RS15145 () | 6662..8569 | + | 1908 | WP_119797991.1 | Protein TraI | Relaxase |
| CCS41_RS15840 () | 8588..8746 | + | 159 | WP_205411529.1 | hypothetical protein | - |
| CCS41_RS15150 () | 9012..9452 | + | 441 | WP_119798023.1 | VOC family protein | - |
| CCS41_RS15155 () | 9510..11222 | + | 1713 | WP_119797992.1 | hypothetical protein | - |
| CCS41_RS15160 () | 11524..12090 | + | 567 | WP_119797993.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| CCS41_RS15165 () | 12247..13269 | + | 1023 | WP_119797994.1 | IS630 family transposase ISVa15 | Transposase |
| CCS41_RS15170 () | 13272..13478 | - | 207 | WP_162860135.1 | transposase | - |
| CCS41_RS15175 () | 13499..14512 | - | 1014 | WP_119797996.1 | IS4 family transposase ISWosp2 | Transposase |
| CCS41_RS15180 () | 14930..15889 | + | 960 | WP_162859989.1 | IS110 family transposase ISStma4 | Transposase |
| CCS41_RS15185 () | 15907..16488 | + | 582 | Protein_19 | IS481 family transposase ISWpi2 | Transposase |
| CCS41_RS15190 () | 16601..16807 | + | 207 | WP_119797874.1 | hypothetical protein | - |
| CCS41_RS15195 () | 16809..17456 | - | 648 | WP_119797432.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| CCS41_RS15200 () | 17625..20611 | + | 2987 | Protein_22 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| CCS41_RS15845 () | 20586..22106 | - | 1521 | WP_162860136.1 | hypothetical protein | - |
| CCS41_RS15215 () | 22127..22783 | - | 657 | WP_162860137.1 | Toxin A | VF |
| CCS41_RS15220 () | 22941..27002 | - | 4062 | WP_119797999.1 | hypothetical protein | - |
| CCS41_RS15225 () | 28128..29516 | + | 1389 | WP_119798000.1 | MFS transporter | - |
| CCS41_RS15230 () | 29738..30760 | - | 1023 | WP_119797794.1 | IS630 family transposase ISVa15 | Transposase |
| CCS41_RS16200 () | 30822..30950 | + | 129 | Protein_28 | GNAT family N-acetyltransferase | - |
| CCS41_RS15235 () | 30947..31351 | - | 405 | Protein_29 | IS630 family transposase ISOt3 | Transposase |
| CCS41_RS15240 () | 31498..31770 | - | 273 | WP_162860138.1 | IS630 family transposase ISTcSa | Transposase |
| CCS41_RS15245 () | 31919..32457 | - | 539 | Protein_31 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| CCS41_RS15250 () | 32627..33450 | + | 824 | Protein_32 | IS5 family transposase ISCaa2 | Transposase |
| CCS41_RS15255 () | 33469..33816 | + | 348 | Protein_33 | hypothetical protein | VF |
| CCS41_RS15260 () | 33876..34148 | - | 273 | WP_119798001.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CCS41_RS15265 () | 34132..34356 | - | 225 | WP_119798024.1 | TraY domain-containing protein | Antitoxin Detail |
| CCS41_RS15275 () | 34509..35404 | + | 896 | Protein_36 | hypothetical protein | VF |
| CCS41_RS15280 () | 35408..36619 | + | 1212 | WP_119798004.1 | hypothetical protein | VF |
| CCS41_RS15285 () | 36616..37371 | + | 756 | WP_119798005.1 | conjugal transfer protein TraP | - |
| CCS41_RS15850 () | 37382..37576 | + | 195 | WP_162860139.1 | hypothetical protein | - |
| CCS41_RS15290 () | 37561..37923 | + | 363 | WP_162860140.1 | conjugal transfer protein TraQ | - |
| CCS41_RS15295 () | 37991..38386 | + | 396 | WP_119798006.1 | TraR conjugal transfer protein | - |
| CCS41_RS15300 () | 38435..39013 | + | 579 | WP_119798007.1 | TraT conjugal transfer protein | - |
| CCS41_RS15305 () | 39042..39461 | - | 420 | WP_119798008.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| CCS41_RS15310 () | 39461..39691 | - | 231 | WP_119798009.1 | antitoxin | Antitoxin Detail |
| CCS41_RS15315 () | 39819..42889 | + | 3071 | Protein_45 | hypothetical protein | VF |
| CCS41_RS15320 () | 42899..44092 | + | 1194 | WP_162860111.1 | conjugal transfer protein TraW | - |
| CCS41_RS15325 () | 44085..44645 | + | 561 | WP_119797797.1 | conjugal transfer protein TraX | - |
| CCS41_RS15330 () | 44716..44868 | - | 153 | WP_119797796.1 | Hok/Gef family protein | - |
| CCS41_RS15335 () | 45116..47263 | + | 2148 | WP_119798010.1 | DotA/TraY family protein | - |
| CCS41_RS15340 () | 47343..47981 | + | 639 | WP_119798011.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| CCS41_RS15345 () | 48007..48312 | - | 306 | WP_119798012.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CCS41_RS15350 () | 48300..48572 | - | 273 | WP_119798013.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| CCS41_RS15355 () | 48647..49753 | + | 1107 | Protein_53 | conjugal transfer protein TrbA | - |
| CCS41_RS15360 () | 49942..50904 | + | 963 | WP_119798014.1 | thioredoxin fold domain-containing protein | - |
| CCS41_RS15365 () | 50907..53057 | + | 2151 | WP_119798015.1 | conjugal transfer protein TrbC | - |
| CCS41_RS15370 () | 53095..53592 | + | 498 | WP_119798025.1 | Phospholipase D | VF |
| CCS41_RS15375 () | 53841..54182 | + | 342 | WP_119798016.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CCS41_RS15380 () | 54179..54463 | + | 285 | WP_119798017.1 | helix-turn-helix domain-containing protein | - |
| CCS41_RS15385 () | 54714..54938 | - | 225 | WP_119798018.1 | ISKra4 family transposase ISXne1 | Transposase |
| CCS41_RS15390 () | 55089..55895 | + | 807 | WP_119798019.1 | IS21 family transposase ISShfr5 | Transposase |
| CCS41_RS15395 () | 55909..56660 | + | 752 | Protein_61 | IS21 family transposase ISShfr5 | Transposase |
| CCS41_RS15400 () | 56977..57225 | + | 249 | WP_119798020.1 | hypothetical protein | - |
| CCS41_RS15405 () | 57217..60203 | - | 2987 | Protein_63 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| CCS41_RS15410 () | 60372..61019 | + | 648 | WP_119797432.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| CCS41_RS15415 () | 61021..61227 | - | 207 | WP_119797874.1 | hypothetical protein | - |
| CCS41_RS15420 () | 61340..61921 | - | 582 | Protein_66 | IS481 family transposase ISWpi2 | Transposase |
| CCS41_RS15425 () | 61939..62898 | - | 960 | WP_162859989.1 | IS110 family transposase ISStma4 | Transposase |
| CCS41_RS15430 () | 63316..64329 | + | 1014 | WP_119797996.1 | IS4 family transposase ISWosp2 | Transposase |
| CCS41_RS15435 () | 64350..64556 | + | 207 | WP_162860135.1 | transposase | - |
| CCS41_RS15440 () | 64559..65581 | - | 1023 | WP_119797994.1 | IS630 family transposase ISVa15 | Transposase |
| CCS41_RS15445 () | 65813..67123 | - | 1311 | WP_119798021.1 | cytosine permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|