MGE detailed information
MGE type: Conjugative plasmid MGE length: 169505 bp
Accession: NZ_CP021087 Location: 1..169505 Organism: Escherichia coli strain 13P460A Replicon: plasmid p13P460A-2
Accession: NZ_CP021087 Location: 1..169505 Organism: Escherichia coli strain 13P460A Replicon: plasmid p13P460A-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
BWI88_RS25350 () | 174..598 | - | 425 | Protein_1 | tyrosine-type recombinase/integrase | - |
BWI88_RS25355 () | 719..908 | - | 190 | Protein_2 | serine/threonine protein kinase | - |
BWI88_RS25360 () | 1281..2184 | - | 904 | Protein_3 | hypothetical protein | VF |
BWI88_RS25365 () | 2253..3362 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
BWI88_RS25375 () | 3795..4748 | - | 954 | WP_000280980.1 | Protease 7 | VF |
BWI88_RS25390 () | 6021..6179 | - | 159 | WP_001324039.1 | integrase core domain-containing protein | - |
BWI88_RS25395 () | 6363..7562 | + | 1200 | Protein_7 | IS3 family transposase IS629 | Transposase |
BWI88_RS25400 () | 7710..8035 | - | 326 | Protein_8 | IS3 family transposase ISLad1 | Transposase |
BWI88_RS25405 () | 9016..10203 | + | 1188 | WP_000928804.1 | efflux RND transporter periplasmic adaptor subunit | - |
BWI88_RS25410 () | 10200..12140 | + | 1941 | WP_000733250.1 | Macrolide export ATP-binding/permease protein MacB | VF |
BWI88_RS25415 () | 12144..13514 | + | 1371 | WP_001312828.1 | efflux transporter outer membrane subunit | - |
BWI88_RS25425 () | 13988..14182 | + | 195 | Protein_12 | IS200-IS605 family transposase IS200C | Transposase |
BWI88_RS25430 () | 14311..15252 | - | 942 | WP_000974762.1 | hypothetical protein | - |
BWI88_RS25440 () | 15487..16876 | - | 1390 | Protein_14 | ISNCY family transposase ISKpn21 | Transposase |
BWI88_RS25445 () | 17186..17335 | - | 150 | Protein_15 | IS3 family transposase IS2 | Transposase |
BWI88_RS25450 () | 17513..18706 | - | 1194 | WP_000450494.1 | GTP-binding protein | - |
BWI88_RS25460 () | 19948..20676 | - | 729 | Protein_17 | IS3 family transposase IS2 | Transposase |
BWI88_RS25465 () | 20738..21900 | + | 1163 | WP_085947598.1 | IS3 family transposase ISEc17 | Transposase |
BWI88_RS25470 () | 21917..22482 | - | 566 | Protein_19 | IS3 family transposase IS2 | Transposase |
BWI88_RS25480 () | 23062..23355 | + | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
BWI88_RS25485 () | 23413..23612 | - | 200 | Protein_21 | lysis system i-spanin subunit Rz | - |
BWI88_RS25495 () | 24166..25265 | + | 1100 | Protein_22 | IS481 family transposase ISKpn28 | Transposase |
BWI88_RS25505 () | 26501..27616 | + | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
BWI88_RS25510 () | 27756..31415 | + | 3660 | WP_001389363.1 | Multidrug efflux ATP-binding/permease protein | VF |
BWI88_RS25515 () | 31519..32748 | + | 1230 | WP_000933678.1 | Enterochelin esterase | VF |
BWI88_RS25520 () | 32833..33789 | + | 957 | WP_000271274.1 | Ferri-bacillibactin esterase BesA | VF |
BWI88_RS25525 () | 33834..36011 | - | 2178 | WP_001222186.1 | Ferric enterobactin receptor | VF |
BWI88_RS25540 () | 36877..37911 | - | 1035 | WP_001190234.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
BWI88_RS25550 () | 38471..38779 | - | 309 | WP_000377483.1 | hypothetical protein | - |
BWI88_RS25555 () | 38878..39060 | - | 183 | WP_000969988.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
BWI88_RS25560 () | 39057..39254 | - | 198 | WP_001324224.1 | toxin-antitoxin system protein | Antitoxin Detail |
BWI88_RS25565 () | 39936..41210 | + | 1275 | WP_199776869.1 | HlyD family secretion protein | - |
BWI88_RS25570 () | 41185..43299 | + | 2115 | WP_001183604.1 | peptidase domain-containing ABC transporter | - |
BWI88_RS25575 () | 43469..43780 | - | 312 | WP_001259758.1 | colicin V | - |
BWI88_RS26680 () | 43758..43994 | - | 237 | WP_001323890.1 | colicin V immunity protein | - |
BWI88_RS25585 () | 44155..44932 | + | 778 | Protein_36 | gfo/Idh/MocA family oxidoreductase | - |
BWI88_RS25590 () | 44934..45203 | + | 270 | WP_000379710.1 | SemiSWEET transporter | - |
BWI88_RS25595 () | 45200..46180 | + | 981 | WP_001017346.1 | NAD(P)-binding domain-containing protein | - |
BWI88_RS25600 () | 46256..46636 | + | 381 | WP_001171523.1 | IS66 family transposase ISEc8 | Transposase |
BWI88_RS25605 () | 46633..46980 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
BWI88_RS25610 () | 47030..47890 | + | 861 | Protein_41 | IS66 family transposase ISEc8 | Transposase |
BWI88_RS25615 () | 47926..50931 | - | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
BWI88_RS25620 () | 51095..51652 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
BWI88_RS25625 () | 51835..52695 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
BWI88_RS25630 () | 52844..53521 | + | 678 | Protein_45 | IS4 family transposase IS10R | Transposase |
BWI88_RS25635 () | 53531..53902 | - | 372 | WP_035689358.1 | Transposon Tn10 TetD protein | VF |
BWI88_RS25640 () | 54035..54628 | + | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
BWI88_RS25645 () | 54741..55946 | - | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
BWI88_RS25650 () | 56028..56651 | + | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
BWI88_RS25655 () | 56629..57315 | - | 687 | WP_001284954.1 | winged helix-turn-helix domain-containing protein | - |
BWI88_RS25660 () | 57323..57709 | - | 387 | WP_000460653.1 | hypothetical protein | - |
BWI88_RS25665 () | 57702..58022 | - | 321 | WP_000562367.1 | antibiotic biosynthesis monooxygenase | - |
BWI88_RS25670 () | 58466..59671 | + | 1206 | WP_000599533.1 | sodium/glutamate symporter | - |
BWI88_RS25675 () | 59902..60021 | + | 120 | Protein_54 | LysR family transcriptional regulator | - |
BWI88_RS25680 () | 60037..61245 | - | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
BWI88_RS25690 () | 61406..62065 | + | 660 | WP_000412211.1 | Chloramphenicol acetyltransferase | ARG |
BWI88_RS25695 () | 62266..62643 | - | 378 | WP_000656305.1 | GNAT family N-acetyltransferase | - |
BWI88_RS25700 () | 62710..65676 | - | 2967 | WP_001138064.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
BWI88_RS25705 () | 65679..66239 | - | 561 | WP_000147567.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
BWI88_RS26685 () | 66365..66715 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
BWI88_RS25715 () | 66918..67931 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
BWI88_RS25720 () | 68089..68562 | + | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
BWI88_RS25725 () | 68693..69481 | + | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
BWI88_RS25730 () | 69687..70034 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
BWI88_RS25735 () | 70028..70867 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
BWI88_RS25745 () | 70995..71198 | + | 204 | WP_000376616.1 | hypothetical protein | - |
BWI88_RS25750 () | 71354..72559 | + | 1206 | WP_000184001.1 | chromate efflux transporter | - |
BWI88_RS25755 () | 72570..72875 | + | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
BWI88_RS26850 () | 72919..72984 | + | 66 | Protein_69 | EAL domain-containing protein | - |
BWI88_RS25765 () | 73102..73866 | + | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
BWI88_RS25780 () | 74359..74943 | - | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
BWI88_RS25785 () | 74943..76181 | - | 1239 | WP_000004159.1 | MFS transporter | - |
BWI88_RS25790 () | 76178..77083 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
BWI88_RS25800 () | 77205..77909 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
BWI88_RS25805 () | 77974..78561 | + | 588 | Protein_75 | replication protein C | - |
BWI88_RS25815 () | 78869..79684 | + | 816 | WP_001043265.1 | Dihydropteroate synthase | ARG |
BWI88_RS25820 () | 79745..80548 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
BWI88_RS25825 () | 80548..81384 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
BWI88_RS25830 () | 81445..81855 | - | 411 | Protein_79 | IS6-like element IS26 family transposase | - |
BWI88_RS25835 () | 81872..82569 | - | 698 | Protein_80 | IS1 family transposase | - |
BWI88_RS25850 () | 82818..83219 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
BWI88_RS26690 () | 83152..83409 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
BWI88_RS25855 () | 83502..84155 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
BWI88_RS25865 () | 85094..85393 | - | 300 | Protein_84 | incFII family plasmid replication initiator RepA | - |
BWI88_RS25870 () | 85480..86226 | - | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
BWI88_RS25875 () | 86241..87782 | - | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
BWI88_RS25880 () | 87974..88537 | - | 564 | Protein_87 | incFII family plasmid replication initiator RepA | - |
BWI88_RS25885 () | 88530..89012 | - | 483 | WP_001273588.1 | hypothetical protein | - |
BWI88_RS25890 () | 89005..89079 | - | 75 | WP_001442103.1 | RepA leader peptide Tap | - |
BWI88_RS25900 () | 89311..89568 | - | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
BWI88_RS25905 () | 89852..90058 | - | 207 | WP_001351576.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
- () | 90045..90106 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
- () | 90045..90106 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
- () | 90045..90106 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
- () | 90045..90106 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
BWI88_RS26855 () | 90362..90436 | - | 75 | Protein_92 | endonuclease | - |
BWI88_RS25915 () | 90682..90894 | - | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
BWI88_RS25920 () | 91030..91590 | - | 561 | WP_000139315.1 | fertility inhibition protein FinO | - |
BWI88_RS25925 () | 91693..92553 | - | 861 | WP_000704514.1 | putative protein YcjY | VF |
BWI88_RS25930 () | 92612..93358 | - | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
BWI88_RS25935 () | 93378..98648 | - | 5271 | WP_148125522.1 | Multifunctional conjugation protein TraI | Relaxase |
BWI88_RS25940 () | 98730..98957 | + | 228 | WP_000450520.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
BWI88_RS25945 () | 98957..99355 | + | 399 | WP_000911313.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
BWI88_RS25950 () | 99364..101517 | - | 2154 | WP_000009324.1 | type IV conjugative transfer system coupling protein TraD | - |
BWI88_RS25955 () | 101770..102501 | - | 732 | WP_023565183.1 | complement resistance protein TraT | - |
BWI88_RS25960 () | 102533..103030 | - | 498 | WP_000605857.1 | entry exclusion protein | - |
BWI88_RS25965 () | 103046..105868 | - | 2823 | WP_001007018.1 | conjugal transfer mating pair stabilization protein TraG | - |
BWI88_RS25970 () | 105865..107238 | - | 1374 | WP_001517790.1 | conjugal transfer protein TraH | - |
BWI88_RS25975 () | 107238..107651 | - | 414 | WP_001324104.1 | F-type conjugal transfer protein TrbF | - |
BWI88_RS25980 () | 107605..107946 | - | 342 | WP_001443031.1 | P-type conjugative transfer protein TrbJ | - |
BWI88_RS25985 () | 107876..108421 | - | 546 | WP_000059851.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
BWI88_RS25990 () | 108408..108692 | - | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
BWI88_RS25995 () | 108773..109087 | + | 315 | WP_001324103.1 | hypothetical protein | - |
BWI88_RS26000 () | 109089..109436 | - | 348 | WP_001287910.1 | conjugal transfer protein TrbA | - |
BWI88_RS26005 () | 109452..110195 | - | 744 | WP_001030393.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
BWI88_RS26010 () | 110188..110445 | - | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
BWI88_RS26015 () | 110472..112280 | - | 1809 | WP_000821841.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
BWI88_RS26020 () | 112277..112915 | - | 639 | WP_000777700.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
BWI88_RS26025 () | 112924..113916 | - | 993 | WP_000830183.1 | conjugal transfer pilus assembly protein TraU | - |
BWI88_RS26030 () | 113913..114545 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
BWI88_RS26035 () | 114542..114928 | - | 387 | WP_000099686.1 | type-F conjugative transfer system protein TrbI | - |
BWI88_RS26040 () | 114925..117552 | - | 2628 | WP_001064245.1 | type IV secretion system protein TraC | - |
BWI88_RS26045 () | 117712..117933 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
BWI88_RS26050 () | 118068..118583 | - | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
BWI88_RS26055 () | 118580..118831 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
BWI88_RS26060 () | 118843..119073 | - | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
BWI88_RS26065 () | 119027..119617 | - | 591 | WP_001376242.1 | conjugal transfer protein TraP | - |
BWI88_RS26070 () | 119607..121034 | - | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
BWI88_RS26075 () | 121034..121738 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
BWI88_RS26080 () | 121749..122315 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
BWI88_RS26085 () | 122337..122648 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
BWI88_RS26090 () | 122663..123028 | - | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
BWI88_RS26095 () | 123061..123456 | - | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
BWI88_RS26100 () | 123555..124244 | - | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
BWI88_RS26105 () | 124431..124814 | - | 384 | WP_001151524.1 | relaxosome protein TraM | - |
BWI88_RS26110 () | 125135..125737 | + | 603 | WP_000243712.1 | hypothetical protein | VF |
BWI88_RS26115 () | 126034..126855 | - | 822 | WP_001234426.1 | DUF945 domain-containing protein | - |
BWI88_RS26120 () | 126973..127260 | - | 288 | WP_000107535.1 | hypothetical protein | - |
BWI88_RS26135 () | 128181..128339 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
- () | 128383..128607 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
- () | 128383..128607 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
- () | 128383..128607 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
- () | 128383..128607 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
BWI88_RS26695 () | 128419..128607 | + | 189 | WP_001299721.1 | hypothetical protein | - |
BWI88_RS26140 () | 128619..129338 | - | 720 | WP_001276238.1 | plasmid SOS inhibition protein A | - |
BWI88_RS26145 () | 129335..129769 | - | 435 | WP_000845936.1 | conjugation system SOS inhibitor PsiB | - |
BWI88_RS26150 () | 129824..130021 | - | 198 | Protein_139 | hypothetical protein | - |
BWI88_RS26155 () | 130049..130282 | - | 234 | WP_000005987.1 | DUF905 family protein | - |
BWI88_RS26160 () | 130350..130889 | - | 540 | WP_000290840.1 | single-stranded DNA-binding protein | - |
BWI88_RS26860 () | 130915..131121 | - | 207 | WP_000275856.1 | hypothetical protein | - |
BWI88_RS26185 () | 132260..133231 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
BWI88_RS26190 () | 133231..134397 | - | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
BWI88_RS26195 () | 134697..135394 | - | 698 | Protein_145 | IS1 family transposase IS1S | Transposase |
BWI88_RS26210 () | 135879..138080 | - | 2202 | WP_000973520.1 | Ferric aerobactin receptor | VF |
BWI88_RS26215 () | 138162..139439 | - | 1278 | WP_000750130.1 | L-lysine N6-monooxygenase | VF |
BWI88_RS26220 () | 139436..141178 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
BWI88_RS26225 () | 141178..142125 | - | 948 | WP_000011910.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
BWI88_RS26230 () | 142126..143850 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
BWI88_RS26235 () | 143986..145179 | + | 1194 | WP_000095526.1 | MFS transporter | - |
BWI88_RS26240 () | 145559..145939 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
BWI88_RS26250 () | 146280..146693 | - | 414 | Protein_153 | phosphopyruvate hydratase | - |
BWI88_RS26255 () | 146691..146948 | + | 258 | Protein_154 | Tn3 family transposase | - |
BWI88_RS26260 () | 147182..148039 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
BWI88_RS26265 () | 148036..148893 | - | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
BWI88_RS26270 () | 148890..149717 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
BWI88_RS26275 () | 149717..150631 | - | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
BWI88_RS26290 () | 150987..151684 | + | 698 | Protein_159 | IS1 family transposase IS1S | Transposase |
BWI88_RS26295 () | 151864..152377 | - | 514 | Protein_160 | DUF4113 domain-containing protein | - |
BWI88_RS26865 () | 152438..152542 | - | 105 | Protein_161 | AAA family ATPase | - |
BWI88_RS26305 () | 152544..152867 | - | 324 | Protein_162 | IS21 family transposase IS21 | Transposase |
BWI88_RS26315 () | 153613..154590 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
BWI88_RS26320 () | 154875..155615 | - | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
BWI88_RS26325 () | 155736..155924 | - | 189 | WP_001324033.1 | hypothetical protein | - |
BWI88_RS26330 () | 156298..157200 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
BWI88_RS26335 () | 157269..158378 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
BWI88_RS26345 () | 158811..159764 | - | 954 | WP_000280980.1 | Protease 7 | VF |
BWI88_RS26360 () | 161037..161195 | - | 159 | WP_001324039.1 | integrase core domain-containing protein | - |
BWI88_RS26365 () | 161379..162578 | + | 1200 | Protein_170 | IS3 family transposase IS629 | Transposase |
BWI88_RS26370 () | 162726..163051 | - | 326 | Protein_171 | IS3 family transposase ISLad1 | Transposase |
BWI88_RS26375 () | 164032..165219 | + | 1188 | WP_000928804.1 | efflux RND transporter periplasmic adaptor subunit | - |
BWI88_RS26380 () | 165216..167156 | + | 1941 | WP_000733250.1 | Macrolide export ATP-binding/permease protein MacB | VF |
BWI88_RS26385 () | 167160..168531 | + | 1372 | Protein_174 | efflux transporter outer membrane subunit | - |
BWI88_RS26395 () | 169004..169198 | + | 195 | Protein_175 | IS200-IS605 family transposase IS200C | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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