MGE detailed information
MGE type: Genomic_island MGE length: 24473 bp
Accession: NZ_CP020543 Location: 3657894..3682366 Organism: Escherichia coli C Replicon: chromosome
Accession: NZ_CP020543 Location: 3657894..3682366 Organism: Escherichia coli C Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B6N50_RS18710 (B6N50_18710) | 3652911..3653263 | - | 353 | Protein_3414 | peptide chain release factor H | - |
| B6N50_RS18715 (B6N50_18715) | 3653259..3653465 | - | 207 | Protein_3415 | RtcB family protein | - |
| B6N50_RS18725 (B6N50_18725) | 3653782..3654234 | - | 453 | WP_071780660.1 | GNAT family N-acetyltransferase | - |
| B6N50_RS18730 (B6N50_18730) | 3654231..3655286 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| B6N50_RS18735 (B6N50_18735) | 3655357..3656142 | - | 786 | WP_000207555.1 | putative lateral flagellar export/assembly protein LafU | - |
| B6N50_RS18740 (B6N50_18740) | 3656114..3657836 | + | 1723 | Protein_3419 | flagellar biosynthesis protein FlhA | - |
| B6N50_RS18745 (B6N50_18745) | 3657915..3658271 | + | 357 | WP_047402977.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| B6N50_RS18750 (B6N50_18750) | 3658328..3659101 | - | 774 | WP_122990173.1 | hypothetical protein | VF |
| B6N50_RS18755 (B6N50_18755) | 3659287..3659547 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| B6N50_RS18760 (B6N50_18760) | 3659550..3659828 | + | 279 | WP_000615979.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| B6N50_RS18765 (B6N50_18765) | 3659984..3660724 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| B6N50_RS18770 (B6N50_18770) | 3660695..3661462 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| B6N50_RS18775 (B6N50_18775) | 3661671..3662249 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| B6N50_RS18780 (B6N50_18780) | 3662489..3664933 | + | 2445 | WP_047402958.1 | Acyl-coenzyme A dehydrogenase | VF |
| B6N50_RS18785 (B6N50_18785) | 3664976..3665422 | - | 447 | WP_047402973.1 | Ivy family C-type lysozyme inhibitor | - |
| B6N50_RS18790 (B6N50_18790) | 3665603..3666373 | + | 771 | WP_001118041.1 | 2-oxoglutaramate amidase | - |
| B6N50_RS18795 (B6N50_18795) | 3666425..3666799 | - | 375 | Protein_3430 | ISAs1 family transposase | - |
| B6N50_RS18800 (B6N50_18800) | 3666845..3667981 | - | 1137 | Protein_3431 | ISAs1 family transposase ISEc1 | Transposase |
| B6N50_RS18815 (B6N50_18815) | 3668727..3669236 | - | 510 | WP_001419315.1 | sel1 repeat family protein | - |
| B6N50_RS18820 (B6N50_18820) | 3669305..3670789 | - | 1485 | Protein_3433 | hypothetical protein | VF |
| B6N50_RS18825 (B6N50_18825) | 3670995..3671732 | - | 738 | WP_001625207.1 | hypothetical protein | VF |
| B6N50_RS18830 (B6N50_18830) | 3671836..3672441 | - | 606 | Protein_3435 | RHS repeat-associated core domain-containing protein | - |
| B6N50_RS18835 (B6N50_18835) | 3672454..3673590 | - | 1137 | WP_053889911.1 | ISAs1 family transposase ISEc1 | Transposase |
| B6N50_RS18845 (B6N50_18845) | 3673939..3674376 | - | 438 | WP_001350058.1 | hypothetical protein | - |
| B6N50_RS23805 | 3674336..3675626 | - | 1291 | Protein_3438 | hypothetical protein | VF |
| B6N50_RS18855 (B6N50_18855) | 3675680..3676183 | + | 504 | Protein_3439 | hypothetical protein | VF |
| B6N50_RS18860 (B6N50_18860) | 3676207..3676689 | + | 483 | WP_001284199.1 | Major exported protein | VF |
| B6N50_RS18865 (B6N50_18865) | 3676733..3677647 | + | 915 | WP_000908057.1 | hypothetical protein | - |
| B6N50_RS18870 (B6N50_18870) | 3677657..3678136 | + | 480 | WP_001236652.1 | hypothetical protein | - |
| B6N50_RS18875 (B6N50_18875) | 3678273..3679058 | - | 786 | WP_001086142.1 | aminopeptidase | - |
| B6N50_RS18885 (B6N50_18885) | 3679595..3680326 | - | 732 | WP_001300756.1 | DNA polymerase III subunit epsilon | - |
| B6N50_RS18890 (B6N50_18890) | 3680391..3680858 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| B6N50_RS18895 (B6N50_18895) | 3680855..3681577 | - | 723 | WP_001295200.1 | class I SAM-dependent methyltransferase | - |
| B6N50_RS18900 (B6N50_18900) | 3681611..3682366 | + | 756 | WP_001052721.1 | hydroxyacylglutathione hydrolase | - |
| B6N50_RS18905 (B6N50_18905) | 3682438..3683796 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| B6N50_RS18910 (B6N50_18910) | 3683844..3684614 | - | 771 | WP_000211686.1 | class I SAM-dependent methyltransferase | - |
| B6N50_RS18915 (B6N50_18915) | 3684692..3685492 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| B6N50_RS18920 (B6N50_18920) | 3685733..3686647 | + | 915 | WP_000648583.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli strain WG5 | Genomic island | TA86709 | NZ_CP024090 | 3637559..3662031 | 0 | |
| Escherichia coli strain WG5::PA8 | Genomic island | TA198092 | NZ_CP072565 | 3701496..3725968 | 0 | |
| Escherichia coli strain WG5::TT12A | Genomic island | TA198115 | NZ_CP072566 | 3701171..3725643 | 0 | |
| Escherichia coli strain NCTC122 | Genomic island | TA293759 | NZ_LT906474 | 3656969..3681441 | 0 |