MGE detailed information
MGE type: Conjugative plasmid MGE length: 107210 bp
Accession: NZ_CP020117 Location: 1..107210 Organism: Escherichia coli strain AR_0104 Replicon: plasmid unitig_5
Accession: NZ_CP020117 Location: 1..107210 Organism: Escherichia coli strain AR_0104 Replicon: plasmid unitig_5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM483_RS25785 () | 611..1174 | + | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| AM483_RS25790 () | 1200..1436 | + | 237 | WP_032153960.1 | hypothetical protein | - |
| AM483_RS25810 () | 2079..2618 | + | 540 | WP_000290841.1 | single-stranded DNA-binding protein | - |
| AM483_RS25815 () | 2715..3419 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| AM483_RS25820 () | 3514..5472 | + | 1959 | WP_000117179.1 | ParB/RepB/Spo0J family partition protein | - |
| AM483_RS25825 () | 5527..5961 | + | 435 | WP_000845940.1 | conjugation system SOS inhibitor PsiB | - |
| AM483_RS25830 () | 5958..6677 | + | 720 | WP_001276232.1 | plasmid SOS inhibition protein A | - |
| - () | 6689..6875 | + | 187 | NuclAT_0 | - | - |
| - () | 6689..6875 | + | 187 | NuclAT_0 | - | - |
| - () | 6689..6875 | + | 187 | NuclAT_0 | - | - |
| - () | 6689..6875 | + | 187 | NuclAT_0 | - | - |
| AM483_RS25840 () | 6923..8292 | + | 1370 | WP_085947770.1 | IS3 family transposase IS150 | Transposase |
| - () | 8319..8359 | + | 41 | NuclAT_1 | - | Antitoxin Detail |
| - () | 8319..8359 | + | 41 | NuclAT_1 | - | Antitoxin Detail |
| - () | 8319..8359 | + | 41 | NuclAT_1 | - | Antitoxin Detail |
| - () | 8319..8359 | + | 41 | NuclAT_1 | - | Antitoxin Detail |
| AM483_RS25845 () | 8403..8561 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| AM483_RS28530 () | 9252..9458 | + | 207 | WP_000275859.1 | hypothetical protein | - |
| AM483_RS25870 () | 9483..9770 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| AM483_RS25875 () | 9889..10710 | + | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| AM483_RS25880 () | 11007..11609 | - | 603 | WP_000243712.1 | hypothetical protein | VF |
| AM483_RS25885 () | 11940..12323 | + | 384 | WP_001151566.1 | relaxosome protein TraM | - |
| AM483_RS25890 () | 12457..13134 | + | 678 | WP_001348626.1 | PAS domain-containing protein | - |
| AM483_RS25895 () | 13222..13443 | + | 222 | WP_072277695.1 | conjugal transfer relaxosome protein TraY | - |
| AM483_RS25900 () | 13494..14191 | + | 698 | Protein_17 | IS1 family transposase IS1G | Transposase |
| AM483_RS25905 () | 14239..14559 | + | 321 | WP_001348757.1 | conjugal transfer protein TrbA | - |
| AM483_RS25910 () | 14686..14970 | + | 285 | WP_001617873.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| AM483_RS25915 () | 14957..15502 | + | 546 | WP_000059829.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| AM483_RS25920 () | 15432..15779 | + | 348 | WP_071571857.1 | P-type conjugative transfer protein TrbJ | - |
| AM483_RS25925 () | 15727..16152 | + | 426 | WP_001348758.1 | F-type conjugal transfer protein TrbF | - |
| AM483_RS25930 () | 16139..17512 | + | 1374 | WP_000944328.1 | conjugal transfer protein TraH | - |
| AM483_RS25935 () | 17509..20328 | + | 2820 | WP_001007062.1 | conjugal transfer mating pair stabilization protein TraG | - |
| AM483_RS25940 () | 20347..20844 | + | 498 | WP_000605862.1 | entry exclusion protein | - |
| AM483_RS25945 () | 20876..21607 | + | 732 | WP_000850429.1 | complement resistance protein TraT | - |
| AM483_RS25950 () | 21810..22589 | + | 780 | WP_000199914.1 | hypothetical protein | - |
| AM483_RS25955 () | 22586..24811 | + | 2226 | WP_047605472.1 | type IV conjugative transfer system coupling protein TraD | - |
| AM483_RS25960 () | 24811..30081 | + | 5271 | WP_001617867.1 | Multifunctional conjugation protein TraI | Relaxase |
| AM483_RS25965 () | 30101..30847 | + | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| AM483_RS25970 () | 30902..31462 | + | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| AM483_RS25975 () | 31593..31805 | + | 213 | WP_013023861.1 | hypothetical protein | - |
| AM483_RS25980 () | 32142..32567 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| AM483_RS25985 () | 32564..32914 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| AM483_RS25990 () | 32945..34558 | + | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| AM483_RS25995 () | 34636..34922 | + | 287 | Protein_36 | DUF2726 domain-containing protein | - |
| - () | 34889..34949 | - | 61 | NuclAT_2 | - | Antitoxin Detail |
| - () | 34889..34949 | - | 61 | NuclAT_2 | - | Antitoxin Detail |
| - () | 34889..34949 | - | 61 | NuclAT_2 | - | Antitoxin Detail |
| - () | 34889..34949 | - | 61 | NuclAT_2 | - | Antitoxin Detail |
| AM483_RS26000 () | 34994..35128 | + | 135 | WP_023144756.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| AM483_RS26005 () | 35425..35679 | + | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| AM483_RS28535 () | 35785..35919 | + | 135 | Protein_39 | protein CopA/IncA | - |
| AM483_RS26015 () | 35916..35990 | + | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| AM483_RS26020 () | 35983..36840 | + | 858 | WP_001617855.1 | incFII family plasmid replication initiator RepA | - |
| AM483_RS26030 () | 37780..38433 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| AM483_RS28345 () | 38526..38783 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| AM483_RS26035 () | 38716..39117 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| AM483_RS26040 () | 39402..40712 | + | 1311 | WP_001262765.1 | DUF262 domain-containing protein | - |
| AM483_RS26045 () | 40741..40839 | + | 99 | Protein_46 | IS1 family transposase | - |
| AM483_RS26050 () | 40989..41849 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| AM483_RS26055 () | 42148..42852 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| AM483_RS26065 () | 42905..43210 | + | 306 | Protein_49 | transposase | - |
| AM483_RS26070 () | 43219..44079 | + | 861 | WP_000493383.1 | EamA family transporter | - |
| AM483_RS26075 () | 44111..45310 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| AM483_RS26080 () | 45416..46042 | + | 627 | WP_031606906.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| AM483_RS26085 () | 46074..46310 | - | 237 | WP_042005022.1 | hypothetical protein | - |
| AM483_RS26090 () | 46364..47200 | - | 837 | WP_000480972.1 | hypothetical protein | ARG |
| AM483_RS26095 () | 47200..48003 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| AM483_RS26100 () | 48064..48879 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| AM483_RS26110 () | 49187..49363 | - | 177 | Protein_57 | replication protein C | - |
| AM483_RS26115 () | 49424..50128 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AM483_RS26120 () | 50250..51155 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| AM483_RS26125 () | 51152..52390 | + | 1239 | WP_000004159.1 | MFS transporter | - |
| AM483_RS26130 () | 52390..52974 | + | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| AM483_RS26140 () | 53467..54231 | - | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| AM483_RS28350 () | 54349..54414 | - | 66 | Protein_63 | EAL domain-containing protein | - |
| AM483_RS26155 () | 54458..54763 | - | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| AM483_RS26160 () | 54774..55979 | - | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| AM483_RS26165 () | 56135..56338 | - | 204 | WP_000376616.1 | hypothetical protein | - |
| AM483_RS26175 () | 56466..57305 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| AM483_RS26180 () | 57299..57646 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| AM483_RS26185 () | 57852..58640 | - | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| AM483_RS26190 () | 58771..59244 | - | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| AM483_RS26195 () | 59402..60151 | + | 750 | Protein_71 | IS91 family transposase ISAzo26 | Transposase |
| AM483_RS26200 () | 60210..60914 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| AM483_RS26210 () | 61269..62444 | - | 1176 | WP_001020413.1 | putative protein YncE | VF |
| AM483_RS26215 () | 62513..64774 | - | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| AM483_RS26220 () | 64943..65719 | - | 777 | WP_000981091.1 | energy transducer TonB | - |
| AM483_RS26225 () | 65727..66602 | - | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| AM483_RS28065 () | 66934..67481 | - | 548 | Protein_77 | replication initiation protein | - |
| AM483_RS26255 () | 69053..69388 | - | 336 | WP_001080732.1 | colicin transporter | - |
| AM483_RS26265 () | 69517..69864 | + | 348 | WP_000142452.1 | hypothetical protein | - |
| AM483_RS26270 () | 69884..70393 | - | 510 | WP_000194542.1 | hypothetical protein | - |
| AM483_RS26275 () | 70390..70650 | - | 261 | WP_000371882.1 | hypothetical protein | - |
| AM483_RS28075 () | 70752..71491 | + | 740 | Protein_82 | IS3 family transposase IS629 | Transposase |
| AM483_RS28540 () | 72164..72478 | + | 315 | Protein_83 | IS5 family transposase ISKpn26 | Transposase |
| AM483_RS28545 () | 72479..72652 | + | 174 | Protein_84 | IS5 family transposase ISKpn26 | Transposase |
| AM483_RS28080 () | 72802..73435 | - | 634 | Protein_85 | histidine-type phosphatase | - |
| AM483_RS26315 () | 73557..74042 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| AM483_RS26320 () | 74067..74552 | - | 486 | WP_001267176.1 | TlpA family protein disulfide reductase | - |
| AM483_RS26325 () | 74539..75234 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| AM483_RS26330 () | 75239..76369 | - | 1131 | WP_000729218.1 | ABC transporter permease | - |
| AM483_RS26335 () | 76359..77642 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| AM483_RS26340 () | 77645..79024 | - | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| AM483_RS26345 () | 79128..79655 | - | 528 | WP_000178050.1 | iron transporter | - |
| AM483_RS26350 () | 79696..81582 | - | 1887 | WP_000118029.1 | FTR1 family iron permease | - |
| AM483_RS26360 () | 81929..82744 | - | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| AM483_RS26365 () | 82927..83433 | - | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| AM483_RS26370 () | 83423..83581 | - | 159 | WP_000449408.1 | DsbA family protein | - |
| AM483_RS28550 () | 83731..83844 | - | 114 | Protein_97 | IS6 family transposase | - |
| AM483_RS26385 () | 84044..84741 | + | 698 | Protein_98 | IS1 family transposase IS1R | Transposase |
| AM483_RS28090 () | 84756..84974 | + | 219 | Protein_99 | IS4 family transposase | - |
| AM483_RS26395 () | 85024..85728 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| AM483_RS26400 () | 85740..86132 | - | 393 | WP_080029215.1 | IS6 family transposase IS15 | Transposase |
| AM483_RS26405 () | 86160..86339 | - | 180 | WP_001513661.1 | hypothetical protein | - |
| AM483_RS26410 () | 86344..86724 | - | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| AM483_RS26415 () | 86724..86945 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| AM483_RS26420 () | 87128..88684 | + | 1557 | WP_001617892.1 | type I restriction-modification system subunit M | - |
| AM483_RS26425 () | 88681..89952 | + | 1272 | WP_023142242.1 | restriction endonuclease subunit S | - |
| AM483_RS26440 () | 90203..90900 | + | 698 | Protein_107 | IS1 family transposase IS1G | Transposase |
| AM483_RS26445 () | 91037..91969 | - | 933 | WP_000991832.1 | hypothetical protein | - |
| AM483_RS26450 () | 91973..92968 | - | 996 | WP_000246636.1 | hypothetical protein | - |
| AM483_RS26455 () | 93676..93894 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| AM483_RS26460 () | 93896..94201 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| AM483_RS26465 () | 94202..95008 | + | 807 | WP_000016982.1 | site-specific integrase | - |
| AM483_RS26470 () | 95782..96537 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| AM483_RS26475 () | 97125..98291 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| AM483_RS26480 () | 98291..99262 | + | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| AM483_RS26495 () | 100129..101031 | + | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| AM483_RS26500 () | 101035..101339 | + | 305 | Protein_117 | hypothetical protein | - |
| AM483_RS26505 () | 101416..102099 | + | 684 | WP_000086185.1 | DNA methylase | - |
| AM483_RS26510 () | 102100..102321 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| AM483_RS26515 () | 102335..102769 | + | 435 | WP_000274437.1 | DUF1380 family protein | - |
| AM483_RS28355 () | 102820..103596 | + | 777 | WP_001753849.1 | hypothetical protein | - |
| AM483_RS26530 () | 104136..104438 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| AM483_RS26535 () | 104485..104907 | + | 423 | WP_000271753.1 | DUF1380 family protein | - |
| AM483_RS26540 () | 104904..105095 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| AM483_RS26555 () | 106130..106360 | + | 231 | WP_000218642.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|