MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 94727 bp
Accession: NZ_CP019175 Location: 1..94727 Organism: Salmonella enterica subsp. enterica serovar Give strain CFSAN024229 Replicon: plasmid pCFSAN024229
Accession: NZ_CP019175 Location: 1..94727 Organism: Salmonella enterica subsp. enterica serovar Give strain CFSAN024229 Replicon: plasmid pCFSAN024229
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LM70_RS24930 () | 1978..2802 | - | 825 | WP_070812938.1 | helix-turn-helix transcriptional regulator | - |
| LM70_RS24935 () | 3148..4098 | + | 951 | Protein_2 | ISNCY family transposase | - |
| LM70_RS24940 () | 4177..8111 | - | 3935 | Protein_3 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| LM70_RS24945 () | 8477..8683 | - | 207 | WP_023972121.1 | ANR family transcriptional regulator | - |
| LM70_RS24950 () | 8899..9720 | - | 822 | WP_023972122.1 | helix-turn-helix domain-containing protein | - |
| LM70_RS24955 () | 10439..10945 | - | 507 | WP_031619420.1 | superoxide dismutase family protein | - |
| LM70_RS24960 () | 11494..12253 | + | 760 | Protein_7 | IS110 family transposase | - |
| LM70_RS24965 () | 12613..13002 | + | 390 | WP_023972293.1 | hypothetical protein | - |
| LM70_RS25655 () | 13151..13309 | - | 159 | WP_023972292.1 | hypothetical protein | - |
| LM70_RS24970 () | 14291..15310 | - | 1020 | WP_070812939.1 | replication initiation protein | - |
| LM70_RS24975 () | 15303..15854 | - | 552 | WP_031233082.1 | replication protein | - |
| LM70_RS24980 () | 15847..15921 | - | 75 | WP_065310830.1 | RepA leader peptide Tap | - |
| LM70_RS24990 () | 16168..16404 | - | 237 | WP_023972288.1 | replication regulatory protein RepA | - |
| LM70_RS24995 () | 16535..16783 | - | 249 | WP_023972287.1 | hypothetical protein | - |
| LM70_RS25000 () | 16780..17088 | - | 309 | WP_071790373.1 | hypothetical protein | - |
| LM70_RS25005 () | 17257..17988 | - | 732 | WP_023972285.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| LM70_RS25010 () | 17985..18551 | - | 567 | WP_031233080.1 | DUF2726 domain-containing protein | - |
| LM70_RS25015 () | 18570..23853 | - | 5284 | Protein_18 | conjugative transfer relaxase/helicase TraI | - |
| LM70_RS25020 () | 23853..26096 | - | 2244 | WP_023972282.1 | type IV conjugative transfer system coupling protein TraD | - |
| LM70_RS25025 () | 26246..26983 | - | 738 | WP_023197467.1 | complement resistance protein TraT | - |
| LM70_RS25030 () | 27157..27732 | - | 576 | WP_023972281.1 | hypothetical protein | - |
| LM70_RS25035 () | 27742..30636 | - | 2895 | WP_023972280.1 | conjugal transfer mating pair stabilization protein TraG | - |
| LM70_RS25040 () | 30638..31999 | - | 1362 | WP_031233079.1 | F-type conjugal transfer protein TraH | - |
| LM70_RS25045 () | 32002..32610 | - | 609 | WP_023972278.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| LM70_RS25050 () | 32635..33411 | - | 777 | WP_023972277.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| LM70_RS25055 () | 33408..35237 | - | 1830 | WP_070812940.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| LM70_RS25060 () | 35234..35848 | - | 615 | WP_031233078.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| LM70_RS25065 () | 35845..36213 | - | 369 | WP_023972274.1 | hypothetical protein | - |
| LM70_RS25070 () | 36224..37210 | - | 987 | WP_023972273.1 | conjugal transfer pilus assembly protein TraU | - |
| LM70_RS25075 () | 37207..37842 | - | 636 | WP_023972272.1 | type-F conjugative transfer system protein TraW | - |
| LM70_RS25080 () | 37842..38291 | - | 450 | WP_023972271.1 | type-F conjugative transfer system protein TrbI | - |
| LM70_RS25085 () | 38288..40879 | - | 2592 | WP_023972270.1 | type IV secretion system protein TraC | - |
| LM70_RS25090 () | 40890..41531 | - | 642 | WP_023972269.1 | type IV conjugative transfer system lipoprotein TraV | - |
| LM70_RS25095 () | 41550..41990 | - | 441 | WP_023972268.1 | hypothetical protein | - |
| LM70_RS25100 () | 41990..42454 | - | 465 | WP_023972267.1 | hypothetical protein | - |
| LM70_RS25105 () | 42540..42917 | - | 378 | Protein_36 | hypothetical protein | - |
| LM70_RS25110 () | 42901..43086 | - | 186 | WP_031233071.1 | hypothetical protein | - |
| LM70_RS25115 () | 43090..43314 | - | 225 | WP_023972264.1 | TraR/DksA C4-type zinc finger protein | - |
| LM70_RS25120 () | 43426..44787 | - | 1362 | WP_023972263.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| LM70_RS25125 () | 44774..45514 | - | 741 | WP_023972262.1 | type-F conjugative transfer system secretin TraK | - |
| LM70_RS25130 () | 45504..46067 | - | 564 | WP_023972261.1 | type IV conjugative transfer system protein TraE | - |
| LM70_RS25135 () | 46087..46392 | - | 306 | WP_023972260.1 | type IV conjugative transfer system protein TraL | - |
| LM70_RS25140 () | 46394..46753 | - | 360 | WP_023972259.1 | type IV conjugative transfer system pilin TraA | - |
| LM70_RS25145 () | 46866..47099 | - | 234 | WP_023972258.1 | TraY domain-containing protein | - |
| LM70_RS25155 () | 47305..47754 | - | 450 | WP_023972256.1 | helix-turn-helix domain-containing protein | - |
| LM70_RS25160 () | 48054..48437 | - | 384 | WP_023972255.1 | relaxosome protein TraM | - |
| LM70_RS25165 () | 48906..49361 | + | 456 | WP_023972254.1 | transglycosylase SLT domain-containing protein | - |
| LM70_RS25170 () | 49372..49901 | - | 530 | Protein_48 | antirestriction protein | - |
| LM70_RS25180 () | 50548..51381 | - | 834 | WP_070812941.1 | N-6 DNA methylase | - |
| LM70_RS25185 () | 51428..51574 | - | 147 | WP_001159046.1 | hypothetical protein | - |
| LM70_RS25190 () | 51669..52016 | - | 348 | WP_000550116.1 | hypothetical protein | - |
| LM70_RS25195 () | 52073..52477 | - | 405 | WP_023972007.1 | hypothetical protein | - |
| LM70_RS25660 () | 52903..53049 | + | 147 | WP_158636558.1 | hypothetical protein | - |
| LM70_RS25200 () | 53321..53479 | - | 159 | WP_031232625.1 | type I toxin-antitoxin system Hok family toxin | - |
| LM70_RS25205 () | 53699..53965 | - | 267 | WP_031232624.1 | hypothetical protein | - |
| LM70_RS25210 () | 53923..54650 | - | 728 | Protein_56 | plasmid SOS inhibition protein A | - |
| LM70_RS25215 () | 54647..55080 | - | 434 | Protein_57 | conjugation system SOS inhibitor PsiB | - |
| LM70_RS25220 () | 55120..57129 | - | 2010 | WP_023972002.1 | ParB/RepB/Spo0J family partition protein | - |
| LM70_RS25225 () | 57200..57442 | - | 243 | WP_023972001.1 | DUF905 domain-containing protein | - |
| LM70_RS25230 () | 57495..58049 | - | 555 | WP_023972000.1 | single-stranded DNA-binding protein | - |
| LM70_RS25770 () | 58380..58601 | + | 222 | WP_170918445.1 | hypothetical protein | - |
| LM70_RS25240 () | 58742..59059 | - | 318 | WP_023971998.1 | hypothetical protein | - |
| LM70_RS25775 () | 59125..59193 | - | 69 | Protein_63 | DNA polymerase III subunit theta | - |
| LM70_RS25245 () | 59386..59577 | - | 192 | WP_023972432.1 | hypothetical protein | - |
| LM70_RS25250 () | 59620..60126 | - | 507 | WP_023972433.1 | antirestriction protein ArdA | - |
| LM70_RS25255 () | 60263..60466 | + | 204 | WP_023972434.1 | hypothetical protein | - |
| LM70_RS25260 () | 60532..61311 | - | 780 | WP_023972435.1 | hypothetical protein | - |
| LM70_RS25265 () | 61365..61784 | - | 420 | WP_023972436.1 | DUF1380 domain-containing protein | - |
| LM70_RS25270 () | 61795..62016 | - | 222 | WP_023972437.1 | hypothetical protein | - |
| LM70_RS25275 () | 62016..62693 | - | 678 | WP_023972438.1 | DNA methylase | - |
| LM70_RS25280 () | 63053..63727 | + | 675 | WP_031233189.1 | SOS response-associated peptidase family protein | - |
| LM70_RS25285 () | 63907..64329 | + | 423 | WP_023972440.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LM70_RS25290 () | 64329..65603 | + | 1275 | WP_023972441.1 | Y-family DNA polymerase | - |
| LM70_RS25295 () | 65652..67025 | - | 1374 | WP_023972442.1 | RES family NAD+ phosphorylase | - |
| LM70_RS25780 () | 67075..67398 | - | 324 | WP_023972443.1 | hypothetical protein | - |
| LM70_RS25305 () | 67395..67832 | - | 438 | WP_000843283.1 | hypothetical protein | - |
| LM70_RS25310 () | 67832..68863 | - | 1032 | WP_023972444.1 | ParB/RepB/Spo0J family partition protein | - |
| LM70_RS25315 () | 68863..69729 | - | 867 | WP_023972445.1 | AAA family ATPase | - |
| LM70_RS25320 () | 70410..70985 | - | 576 | WP_031233190.1 | PIN domain-containing protein | Toxin Detail |
| LM70_RS25325 () | 70985..71446 | - | 462 | WP_023972447.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| LM70_RS25335 () | 71755..72531 | - | 777 | Protein_81 | phage integrase family protein | - |
| LM70_RS25340 () | 72528..73235 | - | 708 | WP_023972450.1 | hypothetical protein | - |
| LM70_RS25665 () | 73279..73593 | - | 315 | WP_139148288.1 | hypothetical protein | - |
| LM70_RS25350 () | 74168..74398 | + | 231 | WP_023972452.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LM70_RS25355 () | 74395..74823 | + | 429 | WP_023972453.1 | PIN domain-containing protein | Toxin Detail |
| LM70_RS25360 () | 74864..75742 | - | 879 | WP_023972454.1 | restriction endonuclease | - |
| LM70_RS25365 () | 76003..76617 | + | 615 | WP_023972455.1 | DNA-binding protein | - |
| LM70_RS25375 () | 76994..77506 | + | 513 | WP_023972457.1 | hypothetical protein | - |
| LM70_RS25380 () | 77531..77821 | + | 291 | WP_023972458.1 | hypothetical protein | - |
| LM70_RS25385 () | 77818..78081 | + | 264 | WP_023972459.1 | hypothetical protein | - |
| LM70_RS25390 () | 78163..78714 | - | 552 | WP_023972460.1 | N-acetyltransferase | Antitoxin Detail |
| LM70_RS25395 () | 78725..78967 | - | 243 | WP_023972461.1 | hypothetical protein | Toxin Detail |
| LM70_RS25405 () | 79181..79549 | + | 369 | Protein_93 | DUF302 domain-containing protein | - |
| LM70_RS25415 () | 80294..81286 | + | 993 | WP_077913714.1 | RepB family plasmid replication initiator protein | - |
| LM70_RS25420 () | 81592..82332 | - | 741 | WP_023972474.1 | site-specific integrase | - |
| LM70_RS25670 () | 83127..83711 | + | 585 | WP_158636559.1 | hypothetical protein | - |
| LM70_RS25425 () | 83755..84468 | + | 714 | WP_023972476.1 | molecular chaperone | - |
| LM70_RS25430 () | 84479..86989 | + | 2511 | WP_023972477.1 | fimbrial biogenesis outer membrane usher protein | - |
| LM70_RS25435 () | 87004..87894 | + | 891 | WP_023972478.1 | hypothetical protein | - |
| LM70_RS25440 () | 88172..89230 | - | 1059 | WP_097361794.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| LM70_RS25445 () | 89428..90042 | - | 615 | WP_023972137.1 | hypothetical protein | - |
| LM70_RS25450 () | 90954..92052 | + | 1099 | WP_097377577.1 | IS3 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|