Detailed information of TA system TA071811

Bioinformatically predicted

Overview

TA module

• Type: II
• Classification (family/domain): yjhX-yjhQ/YjhX-GNAT
• Location: 78163..78967
• Replicon: plasmid pCFSAN024229
• Accession: NZ_CP019175
• Organism: Salmonella enterica subsp. enterica serovar Give strain CFSAN024229

Toxin (Protein)

• Gene name: yjhX
• Uniprot ID: A0A2A6D4J4
• Locus tag: LM70_RS25395
• Protein ID: WP_023972461.1
• Coordinates: 78725..78967 (-)
• Length: 81 a.a.

Antitoxin (Protein)

• Gene name: yjhQ
• Uniprot ID: -
• Locus tag: LM70_RS25390
• Protein ID: WP_023972460.1
• Coordinates: 78163..78714 (-)
• Length: 184 a.a.

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
LM70_RS25665	73279..73593	-	315	WP_139148288.1	hypothetical protein	-
LM70_RS25350	74168..74398	+	231	WP_023972452.1	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	-
LM70_RS25355	74395..74823	+	429	WP_023972453.1	PIN domain-containing protein	-
LM70_RS25360	74864..75742	-	879	WP_023972454.1	restriction endonuclease	-
LM70_RS25365	76003..76617	+	615	WP_023972455.1	DNA-binding protein	-
LM70_RS25375	76994..77506	+	513	WP_023972457.1	hypothetical protein	-
LM70_RS25380	77531..77821	+	291	WP_023972458.1	hypothetical protein	-
LM70_RS25385	77818..78081	+	264	WP_023972459.1	hypothetical protein	-
LM70_RS25390	78163..78714	-	552	WP_023972460.1	N-acetyltransferase	Antitoxin
LM70_RS25395	78725..78967	-	243	WP_023972461.1	hypothetical protein	Toxin
LM70_RS25405	79181..79549	+	369	Protein_93	DUF302 domain-containing protein	-
LM70_RS25415	80294..81286	+	993	WP_077913714.1	RepB family plasmid replication initiator protein	-
LM70_RS25420	81592..82332	-	741	WP_023972474.1	site-specific integrase	-
LM70_RS25670	83127..83711	+	585	WP_158636559.1	hypothetical protein	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)
	-	inside	Non-Mobilizable plasmid	-	-	1..94727	94727

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

No domain identified.

Antitoxin

No domain identified.

Sequences

Toxin

Protein

• Length: 81 a.a.
• Molecular weight: 11939.32 Da
• Isoelectric Point: 5.5500

>T71811 WP_023972461.1 NZ_CP019175:c78967-78725 [Salmonella enterica subsp. enterica serovar Give]
FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
F

Nucleotide

• Length: 243 bp

>T71811 NZ_CP019175:c78967-78725 [Salmonella enterica subsp. enterica serovar Give]
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TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTT

Antitoxin

Protein

• Length: 184 a.a.
• Molecular weight: 27098.51 Da
• Isoelectric Point: 5.5500

>AT71811 WP_023972460.1 NZ_CP019175:c78714-78163 [Salmonella enterica subsp. enterica serovar Give]
FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
FFFFFFFFFFFFFFFFFFFFFFFF

Nucleotide

• Length: 552 bp

>AT71811 NZ_CP019175:c78714-78163 [Salmonella enterica subsp. enterica serovar Give]
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TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
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Structures

Toxin

• AlphaFold DB: A0A2A6D4J4