MGE detailed information
MGE type: Conjugative plasmid MGE length: 127772 bp
Accession: NZ_CP019076 Location: 1..127772 Organism: Escherichia coli strain CRE1493 Replicon: plasmid p1493-5
Accession: NZ_CP019076 Location: 1..127772 Organism: Escherichia coli strain CRE1493 Replicon: plasmid p1493-5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BVL38_RS26725 () | 407..2641 | - | 2235 | WP_062914766.1 | type IV conjugative transfer system coupling protein TraD | - |
| BVL38_RS26730 () | 2894..3625 | - | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| BVL38_RS26735 () | 3657..4154 | - | 498 | WP_000605862.1 | entry exclusion protein | - |
| BVL38_RS26740 () | 4173..6992 | - | 2820 | WP_039023149.1 | conjugal transfer mating pair stabilization protein TraG | - |
| BVL38_RS26745 () | 6989..8362 | - | 1374 | WP_039023150.1 | conjugal transfer protein TraH | - |
| BVL38_RS26750 () | 8362..8724 | - | 363 | WP_071550055.1 | P-type conjugative transfer protein TrbJ | - |
| BVL38_RS26755 () | 8654..9199 | - | 546 | WP_016236310.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| BVL38_RS26760 () | 9186..9470 | - | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| BVL38_RS26765 () | 9589..9936 | - | 348 | WP_001287894.1 | conjugal transfer protein TrbA | - |
| BVL38_RS26770 () | 9952..10695 | - | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| BVL38_RS26775 () | 10688..10945 | - | 258 | WP_039023152.1 | conjugal transfer protein TrbE | - |
| BVL38_RS26780 () | 10972..12780 | - | 1809 | WP_039023153.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| BVL38_RS26785 () | 12777..13415 | - | 639 | WP_001553832.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| BVL38_RS26790 () | 13424..14416 | - | 993 | WP_001553833.1 | conjugal transfer pilus assembly protein TraU | - |
| BVL38_RS26795 () | 14413..15045 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| BVL38_RS26800 () | 15042..15428 | - | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| BVL38_RS26805 () | 15425..18052 | - | 2628 | WP_001064264.1 | type IV secretion system protein TraC | - |
| BVL38_RS26810 () | 18212..18433 | - | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| BVL38_RS26815 () | 18568..19083 | - | 516 | WP_000809832.1 | type IV conjugative transfer system lipoprotein TraV | - |
| BVL38_RS26820 () | 19080..19331 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| BVL38_RS26825 () | 19324..19485 | - | 162 | WP_000741714.1 | conjugal transfer protein TrbD | - |
| BVL38_RS27890 () | 19507..19644 | - | 138 | WP_001553834.1 | conjugal transfer protein TrbD | - |
| BVL38_RS26830 () | 19631..20221 | - | 591 | WP_000002787.1 | conjugal transfer protein TraP | - |
| BVL38_RS26835 () | 20211..21638 | - | 1428 | WP_001553836.1 | conjugal transfer protein TraB | - |
| BVL38_RS26840 () | 21638..22342 | - | 705 | WP_148713163.1 | type-F conjugative transfer system secretin TraK | - |
| BVL38_RS26845 () | 22353..22919 | - | 567 | WP_000399790.1 | type IV conjugative transfer system protein TraE | - |
| BVL38_RS26850 () | 22941..23252 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| BVL38_RS26855 () | 23267..23632 | - | 366 | WP_000340282.1 | type IV conjugative transfer system pilin TraA | - |
| BVL38_RS26860 () | 23675..23890 | - | 216 | WP_001352842.1 | conjugal transfer relaxosome protein TraY | - |
| BVL38_RS26865 () | 24026..24673 | - | 648 | WP_000332520.1 | conjugal transfer transcriptional regulator TraJ | - |
| BVL38_RS26870 () | 24864..25247 | - | 384 | WP_001063020.1 | relaxosome protein TraM | - |
| BVL38_RS26875 () | 25617..26189 | + | 573 | WP_000949660.1 | hypothetical protein | VF |
| BVL38_RS26880 () | 26485..27306 | - | 822 | WP_001234465.1 | DUF945 domain-containing protein | - |
| BVL38_RS26885 () | 27425..27712 | - | 288 | WP_000107242.1 | hypothetical protein | - |
| BVL38_RS28115 () | 27737..27943 | - | 207 | WP_000275854.1 | hypothetical protein | - |
| BVL38_RS26895 () | 28611..28769 | - | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 28834..29032 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| - () | 28834..29032 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| - () | 28834..29032 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| - () | 28834..29032 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| BVL38_RS26900 () | 29001..29106 | - | 106 | Protein_37 | plasmid SOS inhibition protein A | - |
| BVL38_RS26905 () | 29261..29578 | + | 318 | Protein_38 | IS110 family transposase | - |
| BVL38_RS26910 () | 29867..30118 | - | 252 | Protein_39 | iron-containing alcohol dehydrogenase | - |
| BVL38_RS26915 () | 30203..30826 | - | 624 | WP_000912556.1 | potassium channel family protein | - |
| BVL38_RS26920 () | 30842..31535 | - | 694 | Protein_41 | IS1 family transposase IS1A | Transposase |
| BVL38_RS26930 () | 31592..31696 | + | 105 | Protein_42 | thiosulfate reductase cytochrome B subunit | - |
| BVL38_RS26940 () | 31942..33336 | - | 1395 | WP_001037799.1 | carbohydrate porin | - |
| BVL38_RS26945 () | 33531..34964 | - | 1434 | WP_024170639.1 | glycoside hydrolase family 32 protein | - |
| BVL38_RS26950 () | 34961..36238 | - | 1278 | WP_001083369.1 | MFS transporter | - |
| BVL38_RS26955 () | 36301..38427 | - | 2127 | WP_000253905.1 | alpha-galactosidase | - |
| BVL38_RS26960 () | 38523..39533 | - | 1011 | WP_000053332.1 | substrate-binding domain-containing protein | - |
| BVL38_RS26965 () | 39691..40449 | - | 759 | Protein_48 | site-specific integrase | - |
| BVL38_RS26975 () | 40540..41768 | + | 1229 | WP_152924612.1 | IS3 family transposase IS2 | Transposase |
| BVL38_RS26980 () | 41753..42322 | + | 570 | WP_089634947.1 | hypothetical protein | - |
| BVL38_RS28315 () | 43253..43525 | - | 273 | WP_072118979.1 | hypothetical protein | - |
| BVL38_RS26995 () | 43677..44240 | - | 564 | WP_029702196.1 | class I SAM-dependent methyltransferase | - |
| BVL38_RS27000 () | 44288..45649 | - | 1362 | WP_039023242.1 | DUF3560 domain-containing protein | - |
| BVL38_RS27005 () | 45701..45931 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| BVL38_RS27015 () | 46448..46696 | + | 249 | WP_071781657.1 | hypothetical protein | - |
| BVL38_RS27020 () | 46968..47159 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| BVL38_RS27025 () | 47156..47578 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| BVL38_RS27030 () | 47625..47927 | - | 303 | WP_001666994.1 | antirestriction protein | - |
| BVL38_RS27910 () | 48464..49234 | - | 771 | WP_001006251.1 | hypothetical protein | - |
| BVL38_RS27045 () | 49279..49713 | - | 435 | WP_001546462.1 | DUF1380 family protein | - |
| BVL38_RS27050 () | 49727..49948 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| BVL38_RS27055 () | 49949..50632 | - | 684 | WP_032181561.1 | DNA methylase | - |
| BVL38_RS27060 () | 50709..51013 | - | 305 | Protein_63 | hypothetical protein | - |
| BVL38_RS27065 () | 51017..51919 | - | 903 | WP_064766247.1 | DUF1281 domain-containing protein | - |
| BVL38_RS27075 () | 52657..53628 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| BVL38_RS27080 () | 53628..54794 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| BVL38_RS27085 () | 55382..56137 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| BVL38_RS27090 () | 56859..57665 | - | 807 | WP_000016970.1 | site-specific integrase | - |
| BVL38_RS27095 () | 57666..57971 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| BVL38_RS27100 () | 57973..58191 | - | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| BVL38_RS27110 () | 58751..58981 | + | 231 | WP_001261286.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| BVL38_RS27115 () | 58978..59394 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| BVL38_RS27120 () | 59469..61034 | + | 1566 | WP_001128474.1 | AAA family ATPase | - |
| BVL38_RS27125 () | 61019..62041 | + | 1023 | WP_000361402.1 | helicase UvrD | - |
| BVL38_RS27135 () | 62295..62981 | - | 687 | Protein_75 | IS1 family transposase IS1S | Transposase |
| BVL38_RS27145 () | 63131..63828 | - | 698 | Protein_76 | IS1 family transposase IS1X2 | Transposase |
| BVL38_RS28320 () | 64028..64141 | + | 114 | Protein_77 | IS6 family transposase | - |
| BVL38_RS27165 () | 64291..64449 | + | 159 | WP_000449408.1 | DsbA family protein | - |
| BVL38_RS27170 () | 64439..64945 | + | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| BVL38_RS27175 () | 65128..65943 | + | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| BVL38_RS27185 () | 66290..68176 | + | 1887 | WP_000118029.1 | FTR1 family iron permease | - |
| BVL38_RS27190 () | 68217..68744 | + | 528 | WP_000178050.1 | iron transporter | - |
| BVL38_RS27195 () | 68848..70227 | + | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| BVL38_RS27200 () | 70230..71513 | + | 1284 | WP_000964653.1 | ABC transporter permease | - |
| BVL38_RS27205 () | 71503..72633 | + | 1131 | WP_000729219.1 | ABC transporter permease | - |
| BVL38_RS27210 () | 72638..73333 | + | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| BVL38_RS27215 () | 73320..73805 | + | 486 | WP_001267176.1 | TlpA family protein disulfide reductase | - |
| BVL38_RS27220 () | 73830..74315 | + | 486 | WP_000874189.1 | hypothetical protein | - |
| BVL38_RS27225 () | 74437..75069 | + | 633 | Protein_89 | histidine-type phosphatase | - |
| BVL38_RS27230 () | 75219..75323 | - | 105 | Protein_90 | IS5/IS1182 family transposase | - |
| BVL38_RS27235 () | 75357..77771 | - | 2415 | Protein_91 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| BVL38_RS27240 () | 77829..78533 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| BVL38_RS28125 () | 78586..78834 | - | 249 | Protein_93 | DUF3330 domain-containing protein | - |
| BVL38_RS27255 () | 79037..80050 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| BVL38_RS27260 () | 80208..80681 | + | 474 | WP_001389366.1 | Dihydrofolate reductase type 1 | ARG |
| BVL38_RS27265 () | 80812..81600 | + | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| BVL38_RS27270 () | 81806..82153 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| BVL38_RS27275 () | 82147..82986 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| BVL38_RS27285 () | 83114..83317 | + | 204 | WP_000376616.1 | hypothetical protein | - |
| BVL38_RS27290 () | 83473..84678 | + | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| BVL38_RS27295 () | 84689..84994 | + | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| BVL38_RS28130 () | 85038..85103 | + | 66 | Protein_102 | EAL domain-containing protein | - |
| BVL38_RS27305 () | 85221..85985 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| BVL38_RS27320 () | 86478..87062 | - | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| BVL38_RS27325 () | 87062..88300 | - | 1239 | WP_000004159.1 | MFS transporter | - |
| BVL38_RS27330 () | 88297..89202 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| BVL38_RS27340 () | 89324..90028 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| BVL38_RS27345 () | 90111..90971 | + | 861 | WP_000557452.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| BVL38_RS27350 () | 90984..91526 | + | 543 | WP_002063889.1 | AAA family ATPase | - |
| BVL38_RS27355 () | 91618..92666 | + | 1049 | Protein_110 | IS3 family transposase ISKpn11 | Transposase |
| BVL38_RS27360 () | 92720..93424 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| BVL38_RS27365 () | 93489..95732 | - | 2244 | Protein_112 | Tn3 family transposase TnpA_Tn3 | Transposase |
| BVL38_RS27370 () | 95746..96078 | + | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| BVL38_RS27375 () | 96125..97000 | - | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| BVL38_RS27380 () | 97256..97543 | - | 288 | Protein_115 | transposase | - |
| BVL38_RS27385 () | 97609..98313 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| BVL38_RS27390 () | 98367..98807 | - | 441 | Protein_117 | CatB-related O-acetyltransferase | - |
| BVL38_RS27395 () | 98945..99775 | - | 831 | WP_001334766.1 | Beta-lactamase OXA-1 | ARG |
| BVL38_RS27400 () | 99906..100460 | - | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| BVL38_RS27405 () | 100604..101308 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| BVL38_RS27410 () | 101374..102888 | + | 1515 | Protein_121 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| BVL38_RS27415 () | 102930..103172 | + | 243 | WP_032140899.1 | hypothetical protein | - |
| BVL38_RS27420 () | 103204..103854 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| BVL38_RS27425 () | 103960..105159 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| BVL38_RS27430 () | 105191..106075 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| BVL38_RS27435 () | 106213..106620 | - | 408 | WP_001214976.1 | cysteine hydrolase | - |
| BVL38_RS27440 () | 106609..107358 | + | 750 | Protein_127 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| BVL38_RS27445 () | 107382..107987 | - | 606 | WP_000509965.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| BVL38_RS27450 () | 108082..110979 | + | 2898 | WP_001553819.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| BVL38_RS27460 () | 111116..111517 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| BVL38_RS27915 () | 111450..111707 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| BVL38_RS27465 () | 111800..112453 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| BVL38_RS27475 () | 113392..114249 | - | 858 | WP_029702152.1 | incFII family plasmid replication initiator RepA | - |
| BVL38_RS27480 () | 114242..114316 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| BVL38_RS27490 () | 114552..114809 | - | 258 | WP_000083833.1 | replication regulatory protein RepA | - |
| BVL38_RS27495 () | 115093..115299 | - | 207 | WP_032215358.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 115286..115347 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 115286..115347 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 115286..115347 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 115286..115347 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| BVL38_RS28140 () | 115486..115752 | - | 267 | WP_087757657.1 | hypothetical protein | - |
| BVL38_RS27510 () | 116127..116696 | - | 570 | WP_029702150.1 | DUF2726 domain-containing protein | - |
| BVL38_RS27515 () | 116848..117474 | - | 627 | WP_029702149.1 | hypothetical protein | - |
| BVL38_RS27520 () | 117886..118095 | - | 210 | WP_039023209.1 | hypothetical protein | - |
| BVL38_RS27525 () | 118226..118786 | - | 561 | WP_001567328.1 | fertility inhibition protein FinO | - |
| BVL38_RS27530 () | 118841..119587 | - | 747 | WP_052273601.1 | conjugal transfer pilus acetylase TraX | - |
| BVL38_RS27535 () | 119615..120361 | - | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| BVL38_RS27540 () | 120376..121917 | - | 1542 | WP_002431311.1 | IS21 family transposase ISEc12 | Transposase |
| BVL38_RS27550 () | 122193..127463 | - | 5271 | WP_039023145.1 | Multifunctional conjugation protein TraI | Relaxase |
| BVL38_RS27555 () | 127545..127772 | + | 228 | WP_039023146.1 | toxin-antitoxin system antitoxin VapB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|