NZ_CP0190641..229977

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 229977 bp
Accession: NZ_CP019064        Location: 1..229977         Organism: Rahnella sp. ERMR1:05       Replicon: plasmid unnamed2


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
BV494_RS23905 () 282..1372 - 1091 Protein_0 IS3 family transposase -
BV494_RS23910 () 1420..1723 - 304 Protein_1 transposase -
BV494_RS23915 () 1812..3056 + 1245 WP_104925309.1 IS110 family transposase ISYps2 Transposase
BV494_RS23925 () 3330..4285 + 956 Protein_3 IS110 family transposase ISEc32 Transposase
BV494_RS23930 () 4657..5350 + 694 Protein_4 IS1 family transposase IS1N Transposase
BV494_RS23935 () 5351..5680 + 330 Protein_5 Tn3 family transposase TnpR_Tn3 Transposase
BV494_RS23940 () 5817..6560 - 744 WP_104925311.1 Glucose 1-dehydrogenase VF
BV494_RS23945 () 6653..7207 + 555 WP_104925312.1 TetR/AcrR family transcriptional regulator -
BV494_RS23950 () 7703..8578 - 876 WP_104925313.1 LysR family transcriptional regulator -
BV494_RS23955 () 8681..9616 + 936 WP_104925314.1 2-haloacrylate reductase VF
BV494_RS23960 () 9640..9891 - 252 Protein_10 IS3 family transposase ISEc24 Transposase
BV494_RS23965 () 10119..11482 + 1364 WP_104925315.1 IS3 family transposase ISKpn1 Transposase
BV494_RS23970 () 11610..11882 + 273 WP_104925316.1 antitoxin Antitoxin Detail
BV494_RS23975 () 11882..12247 + 366 WP_104925317.1 type II toxin-antitoxin system PemK/MazF family toxin Toxin Detail
BV494_RS25970 () 12355..12510 + 156 WP_192938233.1 hypothetical protein -
BV494_RS23980 () 12642..13577 - 936 WP_104925318.1 Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsC VF
BV494_RS23985 () 13880..14284 - 405 WP_104925319.1 TetR/AcrR family transcriptional regulator -
BV494_RS23990 () 14370..14540 + 171 Protein_17 putative 2,4-dienoyl-CoA reductase VF
BV494_RS23995 () 14530..14646 + 117 Protein_18 putative 2,4-dienoyl-CoA reductase VF
BV494_RS24000 () 15112..16003 - 892 Protein_19 LysR family transcriptional regulator -
BV494_RS24005 () 16145..17020 + 876 WP_104925320.1 NmrA family NAD(P)-binding protein -
BV494_RS25975 () 17525..18427 - 903 Protein_21 IS256 family transposase ISEc39 Transposase
BV494_RS25980 () 18425..19276 - 852 Protein_22 IS256 family transposase ISEc39 Transposase
BV494_RS25985 () 19388..19849 - 462 Protein_23 IS256 family transposase ISEc39 Transposase
BV494_RS24020 () 21396..22283 - 888 WP_104925323.1 LysR family transcriptional regulator -
BV494_RS24025 () 22401..23612 + 1212 WP_104925324.1 MFS transporter -
BV494_RS24030 () 23676..24443 + 768 WP_192938234.1 isochorismatase family protein -
BV494_RS24035 () 24523..25263 + 741 WP_104925326.1 putative oxidoreductase VF
BV494_RS24040 () 25417..26508 + 1092 WP_104925327.1 aldo/keto reductase -
BV494_RS24045 () 26521..26817 - 297 Protein_30 IS256 family transposase IS285 Transposase
BV494_RS24050 () 26865..28634 - 1770 WP_104925328.1 putative signaling protein VF
BV494_RS24065 () 31146..31409 + 264 WP_104925331.1 type II toxin-antitoxin system ParD family antitoxin Antitoxin Detail
BV494_RS24070 () 31396..31692 + 297 WP_104925332.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
BV494_RS24080 () 32668..33924 - 1257 WP_104925473.1 dicarboxylate/amino acid:cation symporter -
BV494_RS24085 () 34454..35353 - 900 WP_104925334.1 Response regulator PleD VF
BV494_RS24090 () 35568..36359 - 792 WP_104925335.1 spermidine synthase -
BV494_RS24095 () 36832..37161 - 330 WP_104925336.1 Flagellar transcriptional regulator FlhD VF
BV494_RS24100 () 37276..38655 - 1380 WP_104925337.1 Methyl-accepting chemotaxis protein II VF
BV494_RS24105 () 39235..39813 - 579 WP_192938235.1 hypothetical protein -
BV494_RS24110 () 40351..41589 + 1239 Protein_41 IS110 family transposase -
BV494_RS24115 () 41732..42154 - 423 WP_104925339.1 GNAT family N-acetyltransferase -
BV494_RS24120 () 42437..42835 - 399 WP_104925340.1 VOC family protein -
BV494_RS24125 () 42987..44151 + 1165 Protein_44 IS30 family transposase ISCfr4 Transposase
BV494_RS24130 () 44265..45269 - 1005 WP_104925341.1 linear amide C-N hydrolase -
BV494_RS24135 () 45843..46646 - 804 WP_104925342.1 hypothetical protein -
BV494_RS24145 () 47984..48940 - 957 WP_104925344.1 IS110 family transposase ISEc32 Transposase
BV494_RS24155 () 49119..49676 - 558 WP_104925345.1 histidine phosphatase family protein -
BV494_RS24160 () 49681..50445 - 765 WP_104925346.1 CbtA family protein -
BV494_RS24165 () 50456..50665 - 210 WP_104925347.1 CbtB-domain containing protein -
BV494_RS24170 () 50698..51123 - 426 WP_104925348.1 nitrile hydratase accessory protein -
BV494_RS24175 () 51120..51779 - 660 WP_104925349.1 nitrile hydratase subunit beta -
BV494_RS24180 () 51821..52435 - 615 WP_104925350.1 nitrile hydratase subunit alpha -
BV494_RS24185 () 52515..54029 - 1515 WP_104925351.1 amidase -
BV494_RS24190 () 54142..55008 - 867 WP_104925352.1 transporter -
BV494_RS24195 () 55057..56103 - 1047 WP_104925353.1 phenylacetaldoxime dehydratase family protein -
BV494_RS24200 () 56403..57374 + 972 WP_104925354.1 Transcriptional activator NphR VF
BV494_RS24205 () 58926..59840 - 915 WP_104925355.1 GGDEF domain-containing protein -
BV494_RS24210 () 59938..60465 + 528 WP_104925356.1 putative RNA polymerase sigma factor FecI VF
BV494_RS24215 () 60485..61465 + 981 WP_104925357.1 FecR domain-containing protein -
BV494_RS24220 () 61632..64031 + 2400 WP_104925474.1 Fe(3+)-pyochelin receptor VF
BV494_RS24225 () 64135..65802 + 1668 WP_104925475.1 ABC transporter ATP-binding protein/permease -
BV494_RS24230 () 66081..67313 - 1233 WP_104925358.1 diguanylate phosphodiesterase -
BV494_RS24240 () 68074..68256 + 183 WP_192938236.1 hypothetical protein -
BV494_RS24245 () 69375..69575 + 201 WP_104925360.1 DUF2767 family protein -
BV494_RS24250 () 69750..70658 + 909 WP_104925361.1 transcriptional regulator GcvA -
BV494_RS24255 () 70734..71561 + 828 WP_104925362.1 DMT family transporter -
BV494_RS24260 () 71579..72469 + 891 WP_104925363.1 oxidoreductase -
BV494_RS24265 () 73391..74593 - 1203 WP_104925364.1 MFS transporter -
BV494_RS24270 () 74657..75661 + 1005 WP_104925365.1 RCS-specific HTH-type transcriptional activator RclR VF
BV494_RS24275 () 77048..77368 + 321 WP_104925366.1 hypothetical protein -
BV494_RS24280 () 77838..78317 - 480 WP_192938237.1 DUF2938 domain-containing protein -
BV494_RS24285 () 78396..78794 + 399 WP_104925368.1 helix-turn-helix domain-containing protein -
BV494_RS24290 () 78966..79508 + 543 WP_104925369.1 GNAT family N-acetyltransferase -
BV494_RS24295 () 79708..79926 + 219 WP_104925370.1 hypothetical protein -
BV494_RS24310 () 82425..82952 + 528 WP_104925373.1 DUF1440 domain-containing protein -
BV494_RS24315 () 83121..84491 - 1371 WP_104925374.1 TolC family protein -
BV494_RS24320 () 84495..86435 - 1941 WP_104925375.1 Macrolide export ATP-binding/permease protein MacB VF
BV494_RS24325 () 86432..87613 - 1182 WP_104925476.1 efflux RND transporter periplasmic adaptor subunit -
BV494_RS24330 () 88381..89430 + 1050 WP_104925376.1 RepB family plasmid replication initiator protein -
BV494_RS24335 () 90079..91248 - 1170 Protein_83 translesion error-prone DNA polymerase V subunit UmuC -
BV494_RS24340 () 91511..94159 + 2649 WP_104925377.1 AAA family ATPase -
BV494_RS24350 () 94473..94574 - 102 Protein_85 hypothetical protein -
BV494_RS24355 () 94574..94996 - 423 WP_104925379.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
BV494_RS24360 () 95299..95934 + 636 WP_104925380.1 AAA family ATPase -
BV494_RS24365 () 95934..96212 + 279 WP_104925381.1 hypothetical protein -
BV494_RS24370 () 98170..98727 + 558 WP_104925382.1 single-stranded DNA-binding protein -
BV494_RS24375 () 98786..99016 + 231 WP_104925477.1 DUF905 family protein -
BV494_RS24380 () 99085..101181 + 2097 WP_104925383.1 ParB/RepB/Spo0J family partition protein -
BV494_RS24385 () 101219..101665 + 447 WP_104925384.1 hypothetical protein -
BV494_RS24390 () 101662..102381 + 720 WP_104925385.1 plasmid SOS inhibition protein A -
BV494_RS24395 () 102385..102699 + 315 WP_104925386.1 theronine dehydrogenase -
BV494_RS24400 () 103119..103802 + 684 WP_104925387.1 DNA methylase -
BV494_RS24405 () 103799..104023 + 225 WP_104925388.1 hypothetical protein -
BV494_RS24415 () 104766..105068 + 303 WP_104925390.1 hypothetical protein -
BV494_RS24420 () 105120..105479 + 360 WP_104925391.1 hypothetical protein -
BV494_RS24425 () 105567..105812 + 246 WP_104925392.1 hypothetical protein -
BV494_RS24430 () 105865..106239 + 375 WP_104925393.1 DUF3085 domain-containing protein -
BV494_RS24435 () 106233..107093 + 861 WP_104925394.1 DUF4942 domain-containing protein -
BV494_RS24445 () 107697..108104 + 408 WP_104925396.1 ammonia monooxygenase -
BV494_RS24450 () 108178..109047 + 870 WP_104925397.1 hypothetical protein -
BV494_RS24455 () 109350..109808 - 459 WP_192938238.1 hypothetical protein VF
BV494_RS24460 () 110239..110631 + 393 WP_104925399.1 relaxosome protein TraM -
BV494_RS24465 () 110843..111562 + 720 WP_104925400.1 hypothetical protein VF
BV494_RS24470 () 111809..112012 + 204 WP_104925401.1 TraY domain-containing protein -
BV494_RS24475 () 112109..112450 + 342 WP_104925402.1 type IV conjugative transfer system pilin TraA -
BV494_RS24480 () 112464..112772 + 309 WP_104925403.1 type IV conjugative transfer system protein TraL -
BV494_RS24485 () 112792..113358 + 567 WP_104925404.1 type IV conjugative transfer system protein TraE -
BV494_RS24490 () 113345..114082 + 738 WP_104925405.1 type-F conjugative transfer system secretin TraK -
BV494_RS24495 () 114069..115400 + 1332 WP_104925406.1 F-type conjugal transfer pilus assembly protein TraB -
BV494_RS24500 () 115397..115942 + 546 WP_192938223.1 type IV conjugative transfer system lipoprotein TraV -
BV494_RS24505 () 115955..118546 + 2592 WP_104925407.1 type IV secretion system protein TraC -
BV494_RS24510 () 118543..118968 + 426 WP_192938224.1 type-F conjugative transfer system protein TrbI -
BV494_RS24515 () 118965..119592 + 628 Protein_116 type-F conjugative transfer system protein TraW -
BV494_RS24520 () 119589..120574 + 986 Protein_117 conjugal transfer pilus assembly protein TraU -
BV494_RS24525 () 120586..120807 + 222 WP_104925408.1 TraR/DksA C4-type zinc finger protein -
BV494_RS24530 () 120804..121421 + 618 WP_104925409.1 type-F conjugative transfer system pilin assembly protein TrbC -
BV494_RS24535 () 121418..123301 + 1884 WP_104925410.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
BV494_RS24540 () 123298..124053 + 756 WP_104925411.1 type-F conjugative transfer system pilin assembly protein TraF -
BV494_RS24545 () 124065..124607 + 543 WP_104925412.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
BV494_RS24550 () 124604..124885 + 282 WP_104925413.1 hypothetical protein -
BV494_RS24555 () 124882..126237 + 1356 WP_104925414.1 conjugal transfer protein TraH -
BV494_RS24560 () 126240..129101 + 2862 WP_104925415.1 conjugal transfer mating pair stabilization protein TraG -
BV494_RS24565 () 129085..129747 + 663 WP_104925416.1 hypothetical protein -
BV494_RS24570 () 129820..132036 + 2217 WP_104925417.1 type IV conjugative transfer system coupling protein TraD -
BV494_RS24575 () 132033..137201 + 5169 WP_104925418.1 Multifunctional conjugation protein TraI Relaxase
BV494_RS24580 () 137214..137417 + 204 WP_104925419.1 hypothetical protein -
BV494_RS24585 () 137665..138618 + 954 WP_104925480.1 Replication protein -
BV494_RS24590 () 139063..139329 + 267 WP_104925420.1 type II toxin-antitoxin system RelE/ParE family toxin -
BV494_RS24595 () 139368..139742 + 375 WP_104925421.1 helix-turn-helix domain-containing protein -
BV494_RS24600 () 140339..140680 + 342 WP_192938225.1 hypothetical protein -
BV494_RS24610 () 141986..142792 - 807 WP_104925424.1 MBL fold metallo-hydrolase -
BV494_RS24615 () 142894..143512 + 619 Protein_135 amidohydrolase family protein -
BV494_RS24620 () 143883..145139 - 1257 WP_104925425.1 MFS transporter -
BV494_RS24625 () 145143..146432 - 1290 WP_104925426.1 ATP-grasp domain-containing protein -
BV494_RS24630 () 146513..147187 - 675 WP_192938226.1 SDR family NAD(P)-dependent oxidoreductase -
BV494_RS24635 () 147256..147822 - 567 WP_104925428.1 hypothetical protein -
BV494_RS24640 () 147819..150332 - 2514 WP_104925429.1 HAD-IIIC family phosphatase -
BV494_RS24645 () 150338..151033 - 696 WP_104925430.1 HAD family hydrolase -
BV494_RS24650 () 151048..151662 - 615 WP_104925431.1 CDP-alcohol phosphatidyltransferase family protein -
BV494_RS24655 () 151664..153526 - 1863 WP_104925432.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
BV494_RS24660 () 153531..154790 - 1260 WP_104925433.1 hypothetical protein -
BV494_RS24665 () 155093..155643 - 551 Protein_145 SDR family oxidoreductase -
BV494_RS24670 () 155891..156040 - 150 Protein_146 IS3 family transposase ISEc24 Transposase
BV494_RS24675 () 156072..156392 - 321 WP_192938227.1 IS110 family transposase ISHne3 Transposase
BV494_RS24680 () 156751..157120 - 370 Protein_148 tyrosine-type recombinase/integrase -
BV494_RS24685 () 158396..158626 + 231 WP_192938228.1 hypothetical protein -
BV494_RS24690 () 158790..162146 - 3357 WP_104925436.1 hypothetical protein -
BV494_RS24695 () 162150..162479 - 330 WP_104925437.1 hypothetical protein -
BV494_RS24700 () 162978..163337 - 360 WP_104925438.1 hypothetical protein -
BV494_RS24705 () 163556..163779 - 224 Protein_153 Tn3 family transposase TnpR_TnEc1 Transposase
BV494_RS24710 () 163843..165504 - 1662 WP_104925439.1 Methyl-accepting chemotaxis protein III VF
BV494_RS24715 () 165953..166348 - 396 WP_104925481.1 cupin domain-containing protein -
BV494_RS24720 () 166406..167137 - 732 WP_104925440.1 carboxymuconolactone decarboxylase family protein -
BV494_RS24725 () 167281..168168 + 888 WP_104925482.1 LysR family transcriptional regulator -
BV494_RS24730 () 168418..168633 - 216 Protein_158 transposase -
BV494_RS24735 () 168641..169587 - 947 Protein_159 IS110 family transposase ISLxx2 Transposase
BV494_RS24740 () 169669..171438 - 1770 WP_104925441.1 putative signaling protein VF
BV494_RS24750 () 172498..173152 - 655 Protein_161 transposase -
BV494_RS24755 () 173139..174120 + 982 Protein_162 IS630 family transposase -
BV494_RS24760 () 175277..176152 - 876 WP_104925442.1 LysR family transcriptional regulator -
BV494_RS24765 () 176255..177190 + 936 WP_104925443.1 2-haloacrylate reductase VF
BV494_RS24770 () 177220..178089 + 870 WP_104925444.1 NmrA/HSCARG family protein -
BV494_RS24775 () 178266..178508 + 243 WP_192938229.1 IS3 family transposase ISCfr6 Transposase
BV494_RS24780 () 178930..180091 + 1162 Protein_167 Tn3 family transposase ISEc63 Transposase
BV494_RS24785 () 180224..181222 - 999 WP_104925483.1 AraC family transcriptional regulator -
BV494_RS24790 () 181278..182099 - 822 WP_104925446.1 SDR family oxidoreductase -
BV494_RS24795 () 182296..182424 - 129 Protein_170 IS30 family transposase -
BV494_RS24800 () 182637..184088 - 1452 WP_104925447.1 putative transport protein HsrA VF
BV494_RS24805 () 184072..184626 - 555 WP_104925448.1 PadR family transcriptional regulator -
BV494_RS24810 () 184705..185001 + 297 Protein_173 Tn3 family transposase -
BV494_RS24815 () 185007..185195 + 189 Protein_174 transposase -
BV494_RS24820 () 185692..186846 - 1155 WP_104925449.1 multidrug effflux MFS transporter -
BV494_RS24825 () 186973..187857 + 885 WP_104925484.1 LysR family transcriptional regulator -
BV494_RS25990 () 188274..188855 + 582 Protein_177 class I tRNA ligase family protein -
BV494_RS25995 () 188844..189482 + 639 Protein_178 ATP-grasp domain-containing protein -
BV494_RS24835 () 189479..189748 + 270 WP_104925450.1 hypothetical protein -
BV494_RS26000 () 189661..190038 + 378 WP_192938230.1 hypothetical protein -
BV494_RS24850 () 190475..191035 - 561 WP_104925453.1 hypothetical protein -
BV494_RS24855 () 191688..192044 + 357 WP_104925454.1 hypothetical protein -
BV494_RS24860 () 192505..193128 + 624 WP_104925455.1 TetR/AcrR family transcriptional regulator -
BV494_RS24865 () 193575..194648 + 1074 WP_104925456.1 TauD/TfdA family dioxygenase -
BV494_RS24870 () 194781..196166 + 1386 WP_104925457.1 MFS transporter -
BV494_RS24875 () 196194..197351 + 1158 WP_104925458.1 ATP-grasp domain-containing protein -
BV494_RS24880 () 197352..198616 + 1265 Protein_187 ATP-grasp domain-containing protein -
BV494_RS24885 () 198729..199853 + 1125 WP_104925459.1 ATP-grasp domain-containing protein -
BV494_RS24890 () 200003..201238 + 1236 WP_104925460.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
BV494_RS24895 () 201216..202514 + 1299 WP_104925461.1 NtaA/DmoA family FMN-dependent monooxygenase -
BV494_RS24900 () 202908..205888 + 2981 Protein_191 Tn3 family transposase TnpA_ISSba14 Transposase
BV494_RS24905 () 205973..206995 + 1023 WP_009652586.1 IS110 family transposase IS5708 Transposase
BV494_RS24910 () 207341..208600 - 1260 WP_104925462.1 serine hydrolase -
BV494_RS24915 () 208751..209722 + 972 WP_104925463.1 lipopolysaccharide 1,3-galactosyltransferase -
BV494_RS24920 () 209724..210980 + 1257 WP_104925464.1 O-antigen ligase family protein -
BV494_RS24925 () 211040..211843 - 804 WP_104925465.1 hypothetical protein -
BV494_RS24930 () 212130..213887 + 1758 WP_192938231.1 Lipid A export ATP-binding/permease protein MsbA VF
BV494_RS24935 () 214361..214717 + 357 WP_104925467.1 IS3 family transposase ISAs33 Transposase
BV494_RS24940 () 214637..215787 - 1151 Protein_199 IS30 family transposase ISAhy3 Transposase
BV494_RS24945 () 215855..216121 - 267 Protein_200 IS3 family transposase ISVch4 Transposase
BV494_RS24950 () 216195..216398 - 204 Protein_201 hypothetical protein -
BV494_RS24955 () 216846..217106 + 261 WP_104925468.1 DUF1778 domain-containing protein Antitoxin Detail
BV494_RS24960 () 217103..217582 + 480 WP_104925469.1 GNAT family N-acetyltransferase Toxin Detail
BV494_RS24965 () 217673..218721 - 1049 Protein_204 tyrosine-type recombinase/integrase -
BV494_RS24970 () 219230..219439 - 210 WP_104925470.1 autotransporter outer membrane beta-barrel domain-containing protein -
BV494_RS26005 () 219436..219540 - 105 WP_192938232.1 autotransporter outer membrane beta-barrel domain-containing protein -
BV494_RS24975 () 219654..220145 - 492 WP_104925471.1 helix-turn-helix transcriptional regulator -
BV494_RS24980 () 220742..221575 + 834 WP_104925472.1 hypothetical protein -
BV494_RS24995 () 224120..224425 - 306 Protein_210 IS3 family transposase IS1400 Transposase
BV494_RS25000 () 224514..225758 + 1245 WP_104925309.1 IS110 family transposase ISYps2 Transposase
BV494_RS25010 () 226031..226986 + 956 Protein_212 IS110 family transposase ISEc32 Transposase
BV494_RS25015 () 227358..228045 + 688 Protein_213 IS1 family transposase -
BV494_RS25020 () 228046..228375 + 330 Protein_214 Tn3 family transposase TnpR_Tn3 Transposase
BV494_RS25025 () 228512..229251 - 740 Protein_215 Diacetyl reductase [(S)-acetoin forming] VF
BV494_RS25030 () 229344..229897 + 554 Protein_216 TetR/AcrR family transcriptional regulator -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance