MGE detailed information
MGE type: Conjugative plasmid MGE length: 132345 bp
Accession: NZ_CP018952 Location: 1..132345 Organism: Escherichia coli strain Ecol_276 Replicon: plasmid pEC276_1
Accession: NZ_CP018952 Location: 1..132345 Organism: Escherichia coli strain Ecol_276 Replicon: plasmid pEC276_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BE964_RS00685 () | 2..697 | + | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| BE964_RS00690 () | 684..1169 | + | 486 | WP_001267176.1 | TlpA family protein disulfide reductase | - |
| BE964_RS00695 () | 1194..1679 | + | 486 | WP_000874189.1 | hypothetical protein | - |
| BE964_RS00700 () | 1801..2434 | + | 634 | Protein_3 | histidine-type phosphatase | - |
| BE964_RS27490 () | 2584..2757 | - | 174 | Protein_4 | IS5 family transposase ISKpn26 | Transposase |
| BE964_RS27495 () | 2758..3072 | - | 315 | Protein_5 | IS5 family transposase ISKpn26 | Transposase |
| BE964_RS26965 () | 3745..4484 | - | 740 | Protein_6 | IS3 family transposase IS629 | Transposase |
| BE964_RS26970 () | 4510..4815 | + | 306 | Protein_7 | IS91 family transposase ISSbo1 | Transposase |
| BE964_RS00740 () | 5338..6513 | - | 1176 | WP_001020413.1 | hypothetical protein | VF |
| BE964_RS00745 () | 6582..8843 | - | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| BE964_RS00750 () | 9012..9788 | - | 777 | WP_000981091.1 | energy transducer TonB | - |
| BE964_RS00755 () | 9796..10671 | - | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| BE964_RS26975 () | 11003..11550 | - | 548 | Protein_12 | replication initiation protein | - |
| BE964_RS26980 () | 11713..11892 | - | 180 | WP_113525033.1 | GlyGly-CTERM sorting domain-containing protein | - |
| BE964_RS00785 () | 13121..13456 | - | 336 | WP_001080732.1 | colicin transporter | - |
| BE964_RS00795 () | 13585..13932 | + | 348 | WP_000142452.1 | hypothetical protein | - |
| BE964_RS00800 () | 13952..14461 | - | 510 | WP_000194542.1 | hypothetical protein | - |
| BE964_RS00805 () | 14458..14718 | - | 261 | WP_000371882.1 | hypothetical protein | - |
| BE964_RS26985 () | 14820..15559 | + | 740 | Protein_18 | IS3 family transposase IS629 | Transposase |
| BE964_RS00830 () | 16232..17740 | + | 1509 | WP_001189113.1 | group II intron reverse transcriptase/maturase | - |
| BE964_RS00835 () | 17830..18213 | + | 384 | Protein_20 | IS3 family transposase IS629 | Transposase |
| BE964_RS00840 () | 18242..18646 | + | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| BE964_RS00845 () | 18643..18990 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| BE964_RS00850 () | 19039..19984 | + | 946 | Protein_23 | IS66 family transposase ISEc8 | Transposase |
| BE964_RS00855 () | 20070..21092 | + | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| BE964_RS00860 () | 21089..21871 | + | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| BE964_RS00865 () | 21939..22547 | + | 609 | Protein_26 | IS66 family transposase ISEc22 | Transposase |
| BE964_RS00870 () | 22610..23401 | - | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| BE964_RS00875 () | 23408..25378 | - | 1971 | WP_001298664.1 | Hemin receptor | VF |
| BE964_RS00885 () | 25660..26096 | + | 437 | Protein_29 | IS3 family transposase IS2 | Transposase |
| BE964_RS00890 () | 26621..26893 | + | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| BE964_RS26990 () | 27339..27514 | + | 176 | Protein_31 | IS3 family transposase | - |
| BE964_RS00895 () | 27740..28909 | - | 1170 | WP_001072358.1 | hypothetical protein | - |
| BE964_RS00900 () | 29276..29464 | + | 189 | WP_001309252.1 | hypothetical protein | - |
| BE964_RS00905 () | 29583..30803 | - | 1221 | WP_000343765.1 | ISL3 family transposase ISEc53 | Transposase |
| BE964_RS00910 () | 30822..31340 | - | 519 | WP_000115885.1 | hypothetical protein | VF |
| BE964_RS00915 () | 31478..32218 | + | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| BE964_RS00920 () | 32503..33480 | - | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| BE964_RS00930 () | 34266..34997 | + | 732 | WP_001617898.1 | hypothetical protein | - |
| BE964_RS00935 () | 35366..35614 | - | 249 | Protein_39 | abortive infection family protein | - |
| BE964_RS00945 () | 35672..36369 | + | 698 | Protein_40 | IS1 family transposase IS1R | Transposase |
| BE964_RS00950 () | 36385..36714 | + | 330 | Protein_41 | TOBE domain-containing protein | - |
| BE964_RS00955 () | 36823..37755 | - | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| BE964_RS00960 () | 37742..39145 | - | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| BE964_RS00965 () | 39389..40369 | + | 981 | WP_000019407.1 | IS5 family transposase IS5D | Transposase |
| BE964_RS00970 () | 40597..40914 | + | 318 | WP_001513659.1 | hypothetical protein | - |
| BE964_RS00975 () | 40864..41277 | - | 414 | Protein_46 | IS3 family transposase ISLad1 | Transposase |
| BE964_RS00980 () | 41201..41560 | - | 360 | WP_001513660.1 | hypothetical protein | - |
| BE964_RS00985 () | 41588..41767 | - | 180 | WP_001513661.1 | hypothetical protein | - |
| BE964_RS00990 () | 41772..42152 | - | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| BE964_RS00995 () | 42152..42373 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| BE964_RS01000 () | 42556..44112 | + | 1557 | WP_001617892.1 | type I restriction-modification system subunit M | - |
| BE964_RS01005 () | 44109..45380 | + | 1272 | WP_023142242.1 | restriction endonuclease subunit S | - |
| BE964_RS01010 () | 45502..46737 | + | 1236 | Protein_53 | HsdR family type I site-specific deoxyribonuclease | - |
| BE964_RS01020 () | 46793..47490 | + | 698 | Protein_54 | IS1 family transposase IS1G | Transposase |
| BE964_RS01025 () | 47627..48559 | - | 933 | WP_000991832.1 | hypothetical protein | - |
| BE964_RS01030 () | 48563..49558 | - | 996 | WP_000246636.1 | hypothetical protein | - |
| BE964_RS01035 () | 50266..50484 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| BE964_RS01040 () | 50486..50791 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| BE964_RS01045 () | 50792..51598 | + | 807 | WP_000016982.1 | site-specific integrase | - |
| BE964_RS01050 () | 52372..53127 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| BE964_RS01055 () | 53715..54881 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| BE964_RS01060 () | 54881..55852 | + | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| BE964_RS01075 () | 56633..57535 | + | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| BE964_RS01080 () | 57539..57843 | + | 305 | Protein_64 | hypothetical protein | - |
| BE964_RS01085 () | 57920..58603 | + | 684 | WP_000086185.1 | DNA methylase | - |
| BE964_RS01090 () | 58604..58825 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| BE964_RS01095 () | 58839..59273 | + | 435 | WP_000274437.1 | DUF1380 family protein | - |
| BE964_RS26995 () | 59324..60100 | + | 777 | WP_001753849.1 | hypothetical protein | - |
| BE964_RS01110 () | 60640..60942 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| BE964_RS01115 () | 60989..61411 | + | 423 | WP_000271753.1 | DUF1380 family protein | - |
| BE964_RS01120 () | 61408..61599 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| BE964_RS01135 () | 62634..62864 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| BE964_RS01140 () | 62916..64277 | + | 1362 | WP_000170714.1 | DUF3560 domain-containing protein | - |
| BE964_RS01145 () | 64325..64888 | + | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| BE964_RS01150 () | 64914..65150 | + | 237 | WP_032153960.1 | hypothetical protein | - |
| BE964_RS01170 () | 66445..68346 | + | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| BE964_RS01175 () | 68496..68993 | + | 498 | WP_042045560.1 | single-stranded DNA-binding protein | - |
| BE964_RS01180 () | 69056..69289 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| BE964_RS01185 () | 69355..71313 | + | 1959 | WP_000117179.1 | ParB/RepB/Spo0J family partition protein | - |
| BE964_RS01190 () | 71368..71802 | + | 435 | WP_000845940.1 | conjugation system SOS inhibitor PsiB | - |
| BE964_RS01195 () | 71799..72518 | + | 720 | WP_001276232.1 | plasmid SOS inhibition protein A | - |
| - () | 72530..72716 | + | 187 | NuclAT_0 | - | - |
| - () | 72530..72716 | + | 187 | NuclAT_0 | - | - |
| - () | 72530..72716 | + | 187 | NuclAT_0 | - | - |
| - () | 72530..72716 | + | 187 | NuclAT_0 | - | - |
| BE964_RS01205 () | 72764..74133 | + | 1370 | WP_085947770.1 | IS3 family transposase IS150 | Transposase |
| - () | 74160..74200 | + | 41 | NuclAT_1 | - | Antitoxin Detail |
| - () | 74160..74200 | + | 41 | NuclAT_1 | - | Antitoxin Detail |
| - () | 74160..74200 | + | 41 | NuclAT_1 | - | Antitoxin Detail |
| - () | 74160..74200 | + | 41 | NuclAT_1 | - | Antitoxin Detail |
| BE964_RS01210 () | 74244..74402 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| BE964_RS27500 () | 74845..75180 | + | 336 | WP_013023876.1 | hypothetical protein | - |
| BE964_RS27355 () | 75093..75299 | + | 207 | WP_000275859.1 | hypothetical protein | - |
| BE964_RS01235 () | 75324..75611 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| BE964_RS01240 () | 75730..76551 | + | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| BE964_RS01245 () | 76848..77450 | - | 603 | WP_000243712.1 | hypothetical protein | VF |
| BE964_RS01250 () | 77781..78164 | + | 384 | WP_001151566.1 | relaxosome protein TraM | - |
| BE964_RS01255 () | 78298..78975 | + | 678 | WP_001348626.1 | PAS domain-containing protein | - |
| BE964_RS01260 () | 79063..79290 | + | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| BE964_RS01265 () | 79324..79686 | + | 363 | WP_000338606.1 | type IV conjugative transfer system pilin TraA | - |
| BE964_RS01270 () | 79691..80002 | + | 312 | WP_000012107.1 | type IV conjugative transfer system protein TraL | - |
| BE964_RS01275 () | 80024..80590 | + | 567 | WP_000399791.1 | type IV conjugative transfer system protein TraE | - |
| BE964_RS01280 () | 80601..81305 | + | 705 | WP_148725207.1 | type-F conjugative transfer system secretin TraK | - |
| BE964_RS01285 () | 81305..82756 | + | 1452 | WP_000146687.1 | conjugal transfer protein TraB | - |
| BE964_RS01290 () | 82725..83312 | + | 588 | WP_013023871.1 | conjugal transfer protein TraP | - |
| BE964_RS01295 () | 83251..83610 | + | 360 | WP_001617876.1 | conjugal transfer protein TrbD | - |
| BE964_RS01300 () | 83610..84125 | + | 516 | WP_000809886.1 | type IV conjugative transfer system lipoprotein TraV | - |
| BE964_RS01305 () | 84260..84481 | + | 222 | WP_001278694.1 | conjugal transfer protein TraR | - |
| BE964_RS01310 () | 84641..87268 | + | 2628 | WP_001064258.1 | type IV secretion system protein TraC | - |
| BE964_RS01315 () | 87265..87651 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| BE964_RS01320 () | 87648..88280 | + | 633 | WP_001203727.1 | type-F conjugative transfer system protein TraW | - |
| BE964_RS01325 () | 88277..89269 | + | 993 | WP_000830190.1 | conjugal transfer pilus assembly protein TraU | - |
| BE964_RS01330 () | 89299..89604 | + | 306 | WP_000224413.1 | hypothetical protein | - |
| BE964_RS01335 () | 89613..90251 | + | 639 | WP_001080259.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| BE964_RS01340 () | 90248..92098 | + | 1851 | WP_000821866.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| BE964_RS01345 () | 92125..92382 | + | 258 | WP_000864347.1 | conjugal transfer protein TrbE | - |
| BE964_RS01350 () | 92375..93118 | + | 744 | WP_001030401.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| BE964_RS01355 () | 93248..94228 | + | 981 | WP_000019450.1 | IS5 family transposase ISKpn26 | Transposase |
| BE964_RS01360 () | 94383..95080 | + | 698 | Protein_111 | IS1 family transposase IS1G | Transposase |
| BE964_RS01365 () | 95128..95448 | + | 321 | WP_001348757.1 | conjugal transfer protein TrbA | - |
| BE964_RS01370 () | 95575..95859 | + | 285 | WP_001617873.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| BE964_RS01375 () | 95846..96391 | + | 546 | WP_000059829.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| BE964_RS01380 () | 96321..96668 | + | 348 | WP_071571857.1 | P-type conjugative transfer protein TrbJ | - |
| BE964_RS01385 () | 96616..97041 | + | 426 | WP_001348758.1 | F-type conjugal transfer protein TrbF | - |
| BE964_RS01390 () | 97028..98401 | + | 1374 | WP_000944328.1 | conjugal transfer protein TraH | - |
| BE964_RS01395 () | 98398..101217 | + | 2820 | WP_001007062.1 | conjugal transfer mating pair stabilization protein TraG | - |
| BE964_RS01400 () | 101236..101733 | + | 498 | WP_000605862.1 | entry exclusion protein | - |
| BE964_RS01405 () | 101765..102496 | + | 732 | WP_000850429.1 | complement resistance protein TraT | - |
| BE964_RS01410 () | 102699..103478 | + | 780 | WP_000199914.1 | hypothetical protein | - |
| BE964_RS01415 () | 103475..105700 | + | 2226 | WP_047605472.1 | type IV conjugative transfer system coupling protein TraD | - |
| BE964_RS01420 () | 105700..110970 | + | 5271 | WP_001617867.1 | Multifunctional conjugation protein TraI | Relaxase |
| BE964_RS01425 () | 110990..111736 | + | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| BE964_RS01430 () | 111791..112351 | + | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| BE964_RS01435 () | 112482..112694 | + | 213 | WP_013023861.1 | hypothetical protein | - |
| BE964_RS01445 () | 113253..113678 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| BE964_RS01450 () | 113675..114025 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| BE964_RS01455 () | 114056..115669 | + | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| BE964_RS27360 () | 115747..116033 | + | 287 | Protein_130 | DUF2726 domain-containing protein | - |
| - () | 116000..116060 | - | 61 | NuclAT_2 | - | Antitoxin Detail |
| - () | 116000..116060 | - | 61 | NuclAT_2 | - | Antitoxin Detail |
| - () | 116000..116060 | - | 61 | NuclAT_2 | - | Antitoxin Detail |
| - () | 116000..116060 | - | 61 | NuclAT_2 | - | Antitoxin Detail |
| BE964_RS01465 () | 116105..116239 | + | 135 | WP_023144756.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| BE964_RS01470 () | 116536..116790 | + | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| BE964_RS27505 () | 116896..117030 | + | 135 | Protein_133 | protein CopA/IncA | - |
| BE964_RS01480 () | 117027..117101 | + | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| BE964_RS01485 () | 117094..117951 | + | 858 | WP_001617855.1 | incFII family plasmid replication initiator RepA | - |
| BE964_RS01495 () | 118891..119544 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| BE964_RS27000 () | 119637..119894 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| BE964_RS01500 () | 119827..120228 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| BE964_RS01505 () | 120513..121823 | + | 1311 | WP_001262765.1 | DUF262 domain-containing protein | - |
| BE964_RS01510 () | 121852..121950 | + | 99 | Protein_140 | IS1 family transposase | - |
| BE964_RS01515 () | 122110..122814 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| BE964_RS01520 () | 122848..123536 | - | 689 | Protein_142 | IS1 family transposase IS1R | Transposase |
| BE964_RS27510 () | 123736..123849 | + | 114 | Protein_143 | IS6 family transposase | - |
| BE964_RS01535 () | 123999..124157 | + | 159 | WP_000449408.1 | DsbA family protein | - |
| BE964_RS01540 () | 124147..124653 | + | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| BE964_RS01545 () | 124836..125651 | + | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| BE964_RS01555 () | 125998..127884 | + | 1887 | WP_000118029.1 | FTR1 family iron permease | - |
| BE964_RS01560 () | 127925..128452 | + | 528 | WP_000178050.1 | iron transporter | - |
| BE964_RS01565 () | 128556..129935 | + | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| BE964_RS01570 () | 129938..131221 | + | 1284 | WP_000964653.1 | ABC transporter permease | - |
| BE964_RS01575 () | 131211..132341 | + | 1131 | WP_000729218.1 | ABC transporter permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|