MGE detailed information
MGE type: IS/Tn MGE length: 981 bp
Accession: NZ_CP017848 Location: 24687..25667 Organism: Escherichia coli strain FMU073332 Replicon: plasmid pEcoFMU07332d
Accession: NZ_CP017848 Location: 24687..25667 Organism: Escherichia coli strain FMU073332 Replicon: plasmid pEcoFMU07332d
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BLJ80_RS27045 () | 20384..20776 | - | 393 | WP_000138370.1 | F-type conjugal transfer protein TrbF | - |
| BLJ80_RS27050 () | 20730..21104 | - | 375 | WP_071594518.1 | P-type conjugative transfer protein TrbJ | - |
| BLJ80_RS27055 () | 21034..21363 | - | 330 | Protein_31 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| BLJ80_RS27060 () | 21516..22244 | - | 729 | WP_001230775.1 | type-F conjugative transfer system secretin TraK | - |
| BLJ80_RS27065 () | 22231..22797 | - | 567 | WP_000399782.1 | type IV conjugative transfer system protein TraE | - |
| BLJ80_RS27070 () | 22819..23130 | - | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| BLJ80_RS27075 () | 23135..23497 | - | 363 | WP_001098998.1 | type IV conjugative transfer system pilin TraA | - |
| BLJ80_RS27080 () | 23530..23757 | - | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| BLJ80_RS27085 () | 23894..24565 | - | 672 | WP_072328069.1 | conjugal transfer transcriptional regulator TraJ | - |
| BLJ80_RS27095 () | 24687..25667 | - | 981 | WP_000019402.1 | IS5 family transposase IS5D | Transposase |
| BLJ80_RS27105 () | 25958..26341 | - | 384 | WP_000124827.1 | relaxosome protein TraM | - |
| BLJ80_RS27110 () | 26664..27266 | + | 603 | WP_013188482.1 | transglycosylase SLT domain-containing protein | - |
| BLJ80_RS27115 () | 27562..28383 | - | 822 | WP_001393327.1 | DUF945 domain-containing protein | - |
| BLJ80_RS27120 () | 28500..28787 | - | 288 | WP_000107522.1 | hypothetical protein | - |
| BLJ80_RS27130 () | 28943..29245 | - | 303 | WP_001272235.1 | hypothetical protein | - |
| BLJ80_RS29880 () | 29562..29922 | + | 361 | Protein_44 | hypothetical protein | - |
| BLJ80_RS27150 () | 30160..30318 | - | 159 | WP_072328073.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 30383..30577 | - | 195 | NuclAT_0 | - | Antitoxin Detail |
| - () | 30383..30577 | - | 195 | NuclAT_0 | - | Antitoxin Detail |
| - () | 30383..30577 | - | 195 | NuclAT_0 | - | Antitoxin Detail |
| - () | 30383..30577 | - | 195 | NuclAT_0 | - | Antitoxin Detail |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | IS/Tn | TA6348 | CP009789 | 3666255..3667235 | 0.002 | |
| Escherichia coli str. K-12 substr. MG1655 | IS/Tn | TA6364 | NC_000913 | 3652182..3653162 | 0.002 |