MGE detailed information
MGE type: Conjugative plasmid MGE length: 120528 bp
Accession: NZ_CP017633 Location: 1..120528 Organism: Escherichia coli strain SLK172 Replicon: plasmid pSLK172-2
Accession: NZ_CP017633 Location: 1..120528 Organism: Escherichia coli strain SLK172 Replicon: plasmid pSLK172-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BJJ90_RS30895 () | 1..705 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| BJJ90_RS30910 () | 1127..2002 | + | 876 | WP_015387340.1 | class A extended-spectrum beta-lactamase CTX-M-55 | - |
| BJJ90_RS30915 () | 2049..2525 | - | 477 | WP_013023839.1 | WbuC family cupin fold metalloprotein | - |
| BJJ90_RS30920 () | 2784..3527 | - | 744 | Protein_3 | TEM family class A beta-lactamase | - |
| BJJ90_RS30925 () | 3577..4281 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| BJJ90_RS30935 () | 4667..5083 | + | 417 | WP_014839980.1 | fosfomycin resistance glutathione transferase FosA3 | - |
| BJJ90_RS30940 () | 5088..5606 | - | 519 | WP_014839979.1 | hypothetical protein | - |
| BJJ90_RS30945 () | 5606..6394 | - | 789 | WP_014839978.1 | winged helix-turn-helix domain-containing protein | - |
| BJJ90_RS30950 () | 6414..6884 | - | 471 | WP_049824851.1 | TetR family transcriptional regulator | - |
| BJJ90_RS30960 () | 6894..7598 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| BJJ90_RS30965 () | 7661..8155 | - | 495 | Protein_10 | IS6-like element IS26 family transposase | - |
| BJJ90_RS30975 () | 8422..9858 | + | 1437 | WP_000105383.1 | glutathione synthase | - |
| BJJ90_RS30980 () | 10526..11092 | - | 567 | WP_072657327.1 | replication initiation protein | - |
| BJJ90_RS30985 () | 11179..11883 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| BJJ90_RS30990 () | 12190..13365 | + | 1176 | WP_063865358.1 | multidrug efflux RND transporter periplasmic adaptor subunit OqxA2 | - |
| BJJ90_RS30995 () | 13389..16541 | + | 3153 | WP_058914901.1 | multidrug efflux RND transporter permease subunit OqxB | - |
| BJJ90_RS31000 () | 16611..17090 | - | 480 | WP_000888203.1 | Rrf2 family transcriptional regulator | - |
| BJJ90_RS31010 () | 17179..17883 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| BJJ90_RS31015 () | 17933..18169 | - | 237 | Protein_18 | hypothetical protein | - |
| BJJ90_RS31020 () | 18190..18984 | - | 795 | WP_000572405.1 | aminoglycoside O-phosphotransferase APH(3')-IIa | - |
| BJJ90_RS31025 () | 19013..20443 | - | 1431 | Protein_20 | IS4-like element IS50R family transposase | - |
| BJJ90_RS31030 () | 20563..20751 | + | 189 | WP_000957857.1 | hypothetical protein | - |
| BJJ90_RS31035 () | 20761..21960 | + | 1200 | WP_072648941.1 | IS91 family transposase | - |
| BJJ90_RS33570 () | 22126..22218 | + | 93 | Protein_23 | IS6 family transposase | - |
| BJJ90_RS31040 () | 22457..22738 | - | 282 | WP_000220561.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BJJ90_RS31045 () | 22728..22979 | - | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| BJJ90_RS31060 () | 24214..25053 | + | 840 | WP_024129959.1 | replication initiation protein | - |
| BJJ90_RS31065 () | 25074..25916 | + | 843 | WP_000435064.1 | replication initiation protein | - |
| BJJ90_RS31070 () | 25920..26366 | + | 447 | WP_001074384.1 | hypothetical protein | - |
| BJJ90_RS31075 () | 26434..26856 | + | 423 | WP_179292036.1 | DNA distortion polypeptide 3 | - |
| BJJ90_RS31080 () | 27342..28220 | - | 879 | Protein_30 | IS91 family transposase | - |
| BJJ90_RS31085 () | 28319..29074 | - | 756 | WP_001282653.1 | IS21-like element ISSso4 family helper ATPase IstB | - |
| BJJ90_RS31090 () | 29091..30626 | - | 1536 | WP_023181050.1 | IS21 family transposase | - |
| BJJ90_RS31095 () | 30857..31186 | - | 330 | Protein_33 | transposase zinc-binding domain-containing protein | - |
| BJJ90_RS31100 () | 31196..31384 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| BJJ90_RS33575 () | 31614..31718 | + | 105 | WP_032409716.1 | hypothetical protein | - |
| BJJ90_RS31105 () | 31847..32104 | + | 258 | WP_000764642.1 | hypothetical protein | - |
| BJJ90_RS31110 () | 32162..32938 | - | 777 | WP_000015958.1 | site-specific integrase | - |
| BJJ90_RS31115 () | 32935..33678 | - | 744 | WP_000129823.1 | hypothetical protein | - |
| BJJ90_RS31120 () | 33729..34079 | - | 351 | WP_000493378.1 | hypothetical protein | - |
| BJJ90_RS31130 () | 34759..35754 | + | 996 | WP_000246635.1 | hypothetical protein | - |
| BJJ90_RS31135 () | 35758..36690 | + | 933 | WP_000991830.1 | hypothetical protein | - |
| BJJ90_RS31140 () | 36988..38076 | + | 1089 | WP_000952231.1 | hypothetical protein | - |
| BJJ90_RS31145 () | 38078..38947 | + | 870 | WP_000253407.1 | hypothetical protein | - |
| BJJ90_RS31150 () | 39004..40569 | - | 1566 | WP_000741348.1 | ATP-binding protein | - |
| BJJ90_RS31155 () | 40877..41107 | + | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| BJJ90_RS31160 () | 41104..41250 | + | 147 | Protein_46 | VapC toxin family PIN domain ribonuclease | - |
| BJJ90_RS31165 () | 41290..41994 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| BJJ90_RS31175 () | 42046..43812 | + | 1767 | Protein_48 | Tn3 family transposase | - |
| BJJ90_RS31180 () | 43891..44895 | + | 1005 | WP_000427619.1 | IS110-like element IS5075 family transposase | - |
| BJJ90_RS31185 () | 45077..45253 | - | 177 | WP_000954592.1 | Arm DNA-binding domain-containing protein | - |
| BJJ90_RS31195 () | 45583..46398 | + | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| BJJ90_RS31200 () | 46459..47262 | + | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| BJJ90_RS31205 () | 47262..48098 | + | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| BJJ90_RS31220 () | 48404..48649 | + | 246 | WP_058914914.1 | hypothetical protein | - |
| BJJ90_RS31225 () | 48678..49328 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| BJJ90_RS31230 () | 49434..50633 | + | 1200 | WP_032153701.1 | tetracycline efflux MFS transporter Tet(A) | - |
| BJJ90_RS33190 () | 50600..50788 | - | 189 | Protein_57 | IS91 family transposase | - |
| BJJ90_RS31240 () | 50900..51205 | - | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
| BJJ90_RS31245 () | 51233..52447 | - | 1215 | WP_023300759.1 | chloramphenicol/florfenicol efflux MFS transporter FloR | - |
| BJJ90_RS33955 () | 52664..53110 | - | 447 | Protein_60 | DUF3363 domain-containing protein | - |
| BJJ90_RS31255 () | 53579..55072 | - | 1494 | WP_001120888.1 | IS91-like element ISVsa3 family transposase | - |
| BJJ90_RS31260 () | 55283..55507 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| BJJ90_RS31265 () | 55504..56241 | - | 738 | WP_001446887.1 | recombinase family protein | - |
| BJJ90_RS33580 () | 56727..56867 | - | 141 | WP_001044210.1 | hypothetical protein | - |
| BJJ90_RS31275 () | 56873..57577 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| BJJ90_RS31280 () | 57642..58322 | - | 681 | Protein_66 | class 1 integron integrase IntI1 | - |
| BJJ90_RS31290 () | 58594..59298 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| BJJ90_RS31300 () | 59364..59909 | + | 546 | Protein_68 | Tn3 family transposase | - |
| BJJ90_RS31310 () | 59945..60360 | - | 416 | Protein_69 | IS1 family transposase | - |
| BJJ90_RS31320 () | 60609..61010 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| BJJ90_RS33585 () | 60943..61200 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| BJJ90_RS31330 () | 61293..61946 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| BJJ90_RS33750 () | 62044..62184 | - | 141 | WP_001333237.1 | hypothetical protein | - |
| BJJ90_RS31340 () | 62885..63742 | - | 858 | WP_075362754.1 | incFII family plasmid replication initiator RepA | - |
| BJJ90_RS31345 () | 63735..63809 | - | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| BJJ90_RS31355 () | 64054..64302 | - | 249 | WP_000083837.1 | replication regulatory protein RepA | - |
| BJJ90_RS31360 () | 64586..64735 | - | 150 | WP_001312851.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 64780..64839 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 64780..64839 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 64780..64839 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 64780..64839 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| BJJ90_RS31365 () | 65040..65270 | - | 231 | WP_001736714.1 | hypothetical protein | - |
| BJJ90_RS31370 () | 65434..66033 | - | 600 | WP_032083981.1 | hypothetical protein | - |
| BJJ90_RS31375 () | 66419..66619 | - | 201 | WP_015059022.1 | hypothetical protein | - |
| BJJ90_RS31380 () | 66751..67311 | - | 561 | WP_000139328.1 | fertility inhibition protein FinO | - |
| BJJ90_RS31385 () | 67366..68112 | - | 747 | WP_000205770.1 | conjugal transfer pilus acetylase TraX | - |
| BJJ90_RS31390 () | 68132..73402 | - | 5271 | WP_072648275.1 | conjugative transfer relaxase/helicase TraI | - |
| BJJ90_RS31395 () | 73402..75582 | - | 2181 | WP_021518883.1 | type IV conjugative transfer system coupling protein TraD | - |
| BJJ90_RS31400 () | 75633..76370 | - | 738 | WP_015059020.1 | hypothetical protein | - |
| BJJ90_RS33200 () | 76573..77304 | - | 732 | WP_021559024.1 | complement resistance protein TraT | - |
| BJJ90_RS33205 () | 77329..77850 | - | 522 | WP_000632668.1 | conjugal transfer entry exclusion protein TraS | - |
| BJJ90_RS31410 () | 77883..80699 | - | 2817 | WP_015059018.1 | conjugal transfer mating pair stabilization protein TraG | - |
| BJJ90_RS31415 () | 80696..82069 | - | 1374 | WP_000944325.1 | conjugal transfer protein TraH | - |
| BJJ90_RS31420 () | 82056..82448 | - | 393 | WP_000126338.1 | F-type conjugal transfer protein TrbF | - |
| BJJ90_RS31425 () | 82402..82776 | - | 375 | WP_071776752.1 | P-type conjugative transfer protein TrbJ | - |
| BJJ90_RS31430 () | 82706..83251 | - | 546 | WP_000059817.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| BJJ90_RS31435 () | 83238..83519 | - | 282 | WP_000549793.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| BJJ90_RS31440 () | 83635..84378 | - | 744 | WP_015059017.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| BJJ90_RS31445 () | 84371..84628 | - | 258 | WP_053913405.1 | conjugal transfer protein TrbE | - |
| BJJ90_RS31450 () | 84655..86505 | - | 1851 | WP_015059015.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| BJJ90_RS31455 () | 86502..86924 | - | 423 | WP_001229309.1 | HNH endonuclease | - |
| BJJ90_RS31460 () | 86950..87321 | - | 372 | WP_000056336.1 | hypothetical protein | - |
| BJJ90_RS31465 () | 87318..87956 | - | 639 | WP_000087532.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| BJJ90_RS31470 () | 87983..88504 | - | 522 | WP_015059014.1 | hypothetical protein | - |
| BJJ90_RS31475 () | 88567..88875 | - | 309 | WP_000412447.1 | hypothetical protein | - |
| BJJ90_RS31480 () | 88902..89894 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| BJJ90_RS31485 () | 89891..90523 | - | 633 | WP_001203735.1 | type-F conjugative transfer system protein TraW | - |
| BJJ90_RS31490 () | 90520..90906 | - | 387 | WP_015059013.1 | type-F conjugative transfer system protein TrbI | - |
| BJJ90_RS31495 () | 90903..93530 | - | 2628 | WP_015059012.1 | type IV secretion system protein TraC | - |
| BJJ90_RS31500 () | 93690..93911 | - | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| BJJ90_RS31505 () | 94046..94561 | - | 516 | WP_000809902.1 | type IV conjugative transfer system lipoprotein TraV | - |
| BJJ90_RS31510 () | 94558..94809 | - | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| BJJ90_RS31515 () | 94821..95051 | - | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| BJJ90_RS31520 () | 95005..95595 | - | 591 | WP_000002778.1 | conjugal transfer protein TraP | - |
| BJJ90_RS31525 () | 95585..97012 | - | 1428 | WP_032297072.1 | conjugal transfer protein TraB | - |
| BJJ90_RS31530 () | 97012..97716 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| BJJ90_RS31535 () | 97727..98293 | - | 567 | WP_000399794.1 | type IV conjugative transfer system protein TraE | - |
| BJJ90_RS31540 () | 98315..98626 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| BJJ90_RS31545 () | 98641..99006 | - | 366 | WP_021519752.1 | type IV conjugative transfer system pilin TraA | - |
| BJJ90_RS31550 () | 99040..99267 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| BJJ90_RS31555 () | 99361..100047 | - | 687 | WP_015059009.1 | PAS domain-containing protein | - |
| BJJ90_RS31560 () | 100238..100621 | - | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| BJJ90_RS31565 () | 100898..101545 | + | 648 | WP_015059008.1 | transglycosylase SLT domain-containing protein | - |
| BJJ90_RS31570 () | 101842..102663 | - | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| BJJ90_RS31575 () | 102774..103070 | - | 297 | WP_001272251.1 | hypothetical protein | - |
| BJJ90_RS33960 () | 103370..103747 | + | 378 | Protein_122 | hypothetical protein | - |
| BJJ90_RS31595 () | 103985..104143 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 104187..104411 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 104187..104411 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 104187..104411 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 104187..104411 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| BJJ90_RS33590 () | 104223..104402 | + | 180 | WP_001309233.1 | hypothetical protein | - |
| BJJ90_RS31605 () | 104423..105142 | - | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| BJJ90_RS31610 () | 105139..105573 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| BJJ90_RS31615 () | 105642..107665 | - | 2024 | Protein_127 | ParB/RepB/Spo0J family partition protein | - |
| BJJ90_RS31620 () | 107726..107959 | - | 234 | WP_000006003.1 | DUF905 family protein | - |
| BJJ90_RS31625 () | 108017..108544 | - | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| BJJ90_RS33965 () | 108846..109295 | + | 450 | WP_045892832.1 | hypothetical protein | - |
| BJJ90_RS31645 () | 109381..109944 | - | 564 | WP_015059007.1 | class I SAM-dependent methyltransferase | - |
| BJJ90_RS31650 () | 109990..111351 | - | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| BJJ90_RS31655 () | 111403..111633 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| BJJ90_RS31670 () | 112671..112862 | - | 192 | WP_001027493.1 | hypothetical protein | - |
| BJJ90_RS31675 () | 112859..113281 | - | 423 | WP_000271762.1 | DUF1380 family protein | - |
| BJJ90_RS31680 () | 113328..113630 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| BJJ90_RS33755 () | 114171..114947 | - | 777 | WP_001383963.1 | hypothetical protein | - |
| BJJ90_RS31695 () | 114998..115432 | - | 435 | WP_000274503.1 | DUF1380 family protein | - |
| BJJ90_RS31700 () | 115446..115667 | - | 222 | WP_001104881.1 | hypothetical protein | - |
| BJJ90_RS31705 () | 115668..116351 | - | 684 | WP_000085883.1 | DNA methylase | - |
| BJJ90_RS31715 () | 116428..116721 | - | 294 | WP_032146011.1 | hypothetical protein | - |
| BJJ90_RS31720 () | 116868..117830 | + | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| BJJ90_RS31725 () | 117833..118183 | + | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| BJJ90_RS31730 () | 118306..118587 | - | 282 | WP_001333089.1 | hypothetical protein | - |
| BJJ90_RS32460 () | 118715..118949 | - | 235 | Protein_145 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BJJ90_RS33760 () | 120398..120463 | - | 66 | Protein_146 | IS1 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|